Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31411 Sequoiadendron giganteum HOM05D000008 ORTHO05D385492 1.2e-132 476.5 232 100.0
SEGI_37222 Sequoiadendron giganteum HOM05D000008 ORTHO05D000005 2.6e-63 246.1 226 58.4
SEGI_13570 Sequoiadendron giganteum HOM05D000008 ORTHO05D000005 1.3e-62 243.8 229 57.2
SEGI_10396 Sequoiadendron giganteum HOM05D000008 ORTHO05D000005 6.7e-35 151.8 244 40.6
Cfa017664 Carpinus fangiana HOM05D000008 ORTHO05D000005 6.3e-09 65.5 136 36.8
SalBow8G2080 Salvia bowleyana HOM05D000008 ORTHO05D000005 1.4e-08 64.3 60 51.7
arahy.Tifrunner.gnm1.ann1.H5DQEZ Arachis hypogaea HOM05D000008 ORTHO05D016658 2.4e-08 63.5 51 60.8
FAN14G5735 Fragaria x ananassa HOM05D000008 ORTHO05D000005 2.4e-08 63.5 57 54.4
arahy.Tifrunner.gnm1.ann1.RX2HA0 Arachis hypogaea HOM05D000008 ORTHO05D016658 3.1e-08 63.2 51 60.8
Actinidia02151 Actinidia chinensis HOM05D000008 ORTHO05D000005 4.1e-08 62.8 73 46.6
Rhsim08G0087600 Rhododendron simsii HOM05D000008 ORTHO05D000005 5.3e-08 62.4 46 58.7
Peaxi162Scf00074g00355 Petunia axillaris HOM05D000008 ORTHO05D000005 1.5e-07 60.8 67 46.3
ClCG09G007790 Citrullus lanatus HOM05D000008 ORTHO05D000005 2.6e-07 60.1 53 50.9
Haze_07465 Corylus avellana HOM05D000008 ORTHO05D000005 3.4e-07 59.7 54 55.6
Haze_15681 Corylus avellana HOM05D000008 ORTHO05D000005 3.4e-07 59.7 85 37.6
vmacro00004 Vaccinium macrocarpon HOM05D000008 ORTHO05D000005 3.4e-07 59.7 91 38.5
Manes.03G098700 Manihot esculenta HOM05D000008 ORTHO05D000005 4.5e-07 59.3 90 38.9
Manes.15G108200 Manihot esculenta HOM05D000008 ORTHO05D000005 4.5e-07 59.3 78 43.6
Nitab4.5_0004632g0010 Nicotiana tabacum HOM05D000008 ORTHO05D000005 4.5e-07 59.3 197 28.9
HPP92_015845 Vanilla planifolia HOM05D000569 ORTHO05D000418 4.5e-07 59.3 130 33.8
CiPaw.15G139800 Carya illinoinensis HOM05D000008 ORTHO05D000005 5.9e-07 58.9 97 37.1
Gohir.A11G234000 Gossypium hirsutum HOM05D000008 ORTHO05D000005 5.9e-07 58.9 82 42.7
SalBow7G2246 Salvia bowleyana HOM05D000008 ORTHO05D000005 5.9e-07 58.9 60 48.3
TAR622G0536 Trochodendron aralioides HOM05D004164 ORTHO05D000005 5.9e-07 58.9 78 44.9
AUR62018103 Chenopodium quinoa HOM05D000008 ORTHO05D000005 7.7e-07 58.5 84 40.5
Haze_20485 Corylus avellana HOM05D000008 ORTHO05D000005 7.7e-07 58.5 179 32.4
DCAR_009538 Daucus carota HOM05D000569 ORTHO05D000418 7.7e-07 58.5 56 51.8
Dinv25235 Davidia involucrata HOM05D000008 ORTHO05D000005 7.7e-07 58.5 68 44.1
Ah.08g211570 Amaranthus hybridus HOM05D000569 ORTHO05D000418 1.0e-06 58.2 60 48.3
ATR0737G109 Amborella trichopoda HOM05D000008 ORTHO05D000005 1.0e-06 58.2 54 53.7
PGSC0003DMG400017526 Solanum tuberosum HOM05D000008 ORTHO05D000005 1.0e-06 58.2 77 42.9
CDE05G2248 Ceratophyllum demersum HOM05D000008 ORTHO05D000005 1.3e-06 57.8 46 52.2
EL10Ac1g00237 Beta vulgaris HOM05D000008 ORTHO05D000005 1.7e-06 57.4 164 26.8
CDE04G0449 Ceratophyllum demersum HOM05D000569 ORTHO05D000418 1.7e-06 57.4 56 51.8
AUR62026949 Chenopodium quinoa HOM05D000008 ORTHO05D013152 1.7e-06 57.4 84 38.1
Nn7g38340 Nelumbo nucifera HOM05D000008 ORTHO05D000005 1.7e-06 57.4 93 37.6
Nitab4.5_0000943g0010 Nicotiana tabacum HOM05D000008 ORTHO05D049411 1.7e-06 57.4 57 50.9
SalBow2G0890 Salvia bowleyana HOM05D000008 ORTHO05D000005 1.7e-06 57.4 56 51.8
vmacro06327 Vaccinium macrocarpon HOM05D000008 ORTHO05D000005 1.7e-06 57.4 69 46.4
Aa31LG11G12860 Aethionema arabicum HOM05D000008 ORTHO05D000005 2.2e-06 57.0 67 46.3
arahy.Tifrunner.gnm1.ann1.CD1PG8 Arachis hypogaea HOM05D000008 ORTHO05D000005 2.2e-06 57.0 67 44.8
Ciclev10023756m.g Citrus clementina HOM05D000008 ORTHO05D000005 2.2e-06 57.0 101 36.6
Dinv13457 Davidia involucrata HOM05D000008 ORTHO05D000005 2.2e-06 57.0 115 34.8
Eucgr.K01504 Eucalyptus grandis HOM05D000008 ORTHO05D000005 2.2e-06 57.0 105 38.1
Sabra13G0050100 Salix brachista HOM05D000008 ORTHO05D000005 2.2e-06 57.0 54 51.9
SEGI_04166 Sequoiadendron giganteum HOM05D000008 ORTHO05D000005 2.2e-06 57.0 112 33.9
SEGI_29162 Sequoiadendron giganteum HOM05D000008 ORTHO05D000005 2.2e-06 57.0 112 33.9
SGA_v2.0_scaffold6G03398 Striga asiatica HOM05D000008 ORTHO05D000005 2.2e-06 57.0 54 51.9
HPP92_021107 Vanilla planifolia HOM05D000008 ORTHO05D000005 2.2e-06 57.0 53 52.8
FvH4_3g45450 Fragaria vesca HOM05D000008 ORTHO05D000005 2.9e-06 56.6 72 44.4
FAN11G1071 Fragaria x ananassa HOM05D000008 ORTHO05D000005 2.9e-06 56.6 72 44.4
FAN16G1124 Fragaria x ananassa HOM05D000008 ORTHO05D000005 2.9e-06 56.6 72 44.4
FAN25G0407 Fragaria x ananassa HOM05D000008 ORTHO05D000005 2.9e-06 56.6 72 44.4
Nitab4.5_0001730g0050 Nicotiana tabacum HOM05D000008 ORTHO05D000005 2.9e-06 56.6 54 51.9
PGR119G2281 Punica granatum HOM05D000008 ORTHO05D000005 2.9e-06 56.6 69 49.3
SEGI_16458 Sequoiadendron giganteum HOM05D000008 ORTHO05D000005 2.9e-06 56.6 95 37.9
Atru.chr3.2071 Acer truncatum HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Actinidia16252 Actinidia chinensis HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Actinidia30434 Actinidia chinensis HOM05D000008 ORTHO05D018200 3.8e-06 56.2 54 51.9
ATR0772G076 Amborella trichopoda HOM05D000008 ORTHO05D000005 3.8e-06 56.2 108 33.3
Aqoxy1G00458 Aquilegia oxysepala HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
A06p05710 Brassica napus HOM05D000008 ORTHO05D000005 3.8e-06 56.2 69 43.5
CAN.G282.12 Capsicum annuum HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Cpa.g.sc119.55 Carica papaya HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Cfa009570 Carpinus fangiana HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
CiPaw.14G135900 Carya illinoinensis HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
CDE02G2876 Ceratophyllum demersum HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
CDE05G1592 Ceratophyllum demersum HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
AUR62004517 Chenopodium quinoa HOM05D000008 ORTHO05D000005 3.8e-06 56.2 131 30.5
Ca_16378_v3 Cicer arietinum L. HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Ciclev10015648m.g Citrus clementina HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Haze_22950 Corylus avellana HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Dinv11471 Davidia involucrata HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Dinv13459 Davidia involucrata HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Duzib128G1176 Durio zibethinus HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Duzib177G0179 Durio zibethinus HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Duzib177G0270 Durio zibethinus HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Migut.D02551 Erythranthe guttata HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Eucgr.A02110 Eucalyptus grandis HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Eucgr.B00865 Eucalyptus grandis HOM05D000008 ORTHO05D000005 3.8e-06 56.2 98 32.7
Eucgr.B03606 Eucalyptus grandis HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
FAN21G3393 Fragaria x ananassa HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Glyma.13G032200 Glycine max HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Gohir.A11G304900 Gossypium hirsutum HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Gohir.D08G259000 Gossypium hirsutum HOM05D000008 ORTHO05D000005 3.8e-06 56.2 86 40.7
Gohir.D11G245000 Gossypium hirsutum HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Gohir.D11G320300 Gossypium hirsutum HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Gorai.004G276500 Gossypium raimondii HOM05D000008 ORTHO05D000005 3.8e-06 56.2 86 40.7
Gorai.007G260600 Gossypium raimondii HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Gorai.007G350500 Gossypium raimondii HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Hma1.2p1_0589F.1_g184950 Hydrangea macrophylla HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Lalb_Chr01g0009451 Lupinus albus HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
MBI01_g29965_MAGBIO Magnolia biondii HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
MD11G1006500 Malus domestica HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Manes.09G139900 Manihot esculenta HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Nn2g14522 Nelumbo nucifera HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Nn7g35882 Nelumbo nucifera HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Nitab4.5_0003163g0090 Nicotiana tabacum HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Nitab4.5_0007325g0020 Nicotiana tabacum HOM05D000008 ORTHO05D049403 3.8e-06 56.2 57 49.1
PSO339G1779 Papaver somniferum HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
PSO384G1709 Papaver somniferum HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Phvul.001G071000 Phaseolus vulgaris HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Potri.001G005100 Populus trichocarpa HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Potri.003G219900 Populus trichocarpa HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Potri.013G056400 Populus trichocarpa HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Potri.013G056500 Populus trichocarpa HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Prupe.6G004700 Prunus persica HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
PGR119G2237 Punica granatum HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
QL01p008740 Quercus lobata HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
QL07p007936 Quercus lobata HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
QL07p018713 Quercus lobata HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Sabra01G0003700 Salix brachista HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Sabra13G0050200 Salix brachista HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Sc25g0002870 Simmondsia chinensis HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
Thecc.05G248300 Theobroma cacao HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
TWI32G0214 Tripterygium wilfordii HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
TWI32G1266 Tripterygium wilfordii HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
TWI60G0656 Tripterygium wilfordii HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
TAR633G1582 Trochodendron aralioides HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
TAR636G3328 Trochodendron aralioides HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
vmacro04232 Vaccinium macrocarpon HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
vmacro12604 Vaccinium macrocarpon HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
VMungo0647G1571 Vigna mungo HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
GSVIVG01007740001 Vitis vinifera HOM05D000008 ORTHO05D000005 3.8e-06 56.2 89 41.6
GSVIVG01025452001 Vitis vinifera HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
GSVIVG01033418001 Vitis vinifera HOM05D000008 ORTHO05D000005 3.8e-06 56.2 54 51.9
CSS0041393 Camellia sinensis var. sinensis HOM05D000008 ORTHO05D000005 5.0e-06 55.8 87 39.1
CANSAT11G1478 Cannabis sativa HOM05D000008 ORTHO05D000005 5.0e-06 55.8 54 51.9
CDE02G3394 Ceratophyllum demersum HOM05D000008 ORTHO05D000005 5.0e-06 55.8 76 42.1
Haze_25858 Corylus avellana HOM05D000569 ORTHO05D000418 5.0e-06 55.8 54 51.9
DCAR_004159 Daucus carota HOM05D000008 ORTHO05D045053 5.0e-06 55.8 53 45.3
Dinv25033 Davidia involucrata HOM05D000008 ORTHO05D000005 5.0e-06 55.8 54 51.9
Dinv26505 Davidia involucrata HOM05D000008 ORTHO05D000005 5.0e-06 55.8 97 37.1
Duzib235G0443 Durio zibethinus HOM05D000008 ORTHO05D000005 5.0e-06 55.8 60 48.3
Eucgr.B00866 Eucalyptus grandis HOM05D000008 ORTHO05D000005 5.0e-06 55.8 101 34.7
Eucgr.F03176 Eucalyptus grandis HOM05D000008 ORTHO05D000005 5.0e-06 55.8 225 25.8
Glyma.14G154400 Glycine max HOM05D000008 ORTHO05D000005 5.0e-06 55.8 54 51.9
Medtr3g083540 Medicago truncatula HOM05D000008 ORTHO05D000005 5.0e-06 55.8 54 51.9
Nn2g15841 Nelumbo nucifera HOM05D000008 ORTHO05D000005 5.0e-06 55.8 54 51.9
Psat5g101040 Pisum sativum HOM05D000008 ORTHO05D000005 5.0e-06 55.8 54 51.9
PGR042G1686 Punica granatum HOM05D000008 ORTHO05D000005 5.0e-06 55.8 54 51.9
Rhsim12G0139600 Rhododendron simsii HOM05D000008 ORTHO05D000005 5.0e-06 55.8 56 51.8
SEGI_37800 Sequoiadendron giganteum HOM05D000008 ORTHO05D000005 5.0e-06 55.8 100 35.0
Solyc01g005660.3 Solanum lycopersicum HOM05D000008 ORTHO05D000005 5.0e-06 55.8 54 51.9
Sopen01g001670 Solanum pennellii HOM05D000008 ORTHO05D000005 5.0e-06 55.8 54 51.9
SGA_v2.0_scaffold88G27303 Striga asiatica HOM05D000008 ORTHO05D000005 5.0e-06 55.8 54 51.9
THA.LOC104815668 Tarenaya hassleriana HOM05D000008 ORTHO05D000005 5.0e-06 55.8 54 51.9
Thecc.05G131500 Theobroma cacao HOM05D000008 ORTHO05D000005 5.0e-06 55.8 54 51.9
TPR.G19321 Trifolium pratense HOM05D000008 ORTHO05D000005 5.0e-06 55.8 54 51.9
TAR633G1974 Trochodendron aralioides HOM05D000008 ORTHO05D000005 5.0e-06 55.8 79 41.8
ATR0737G145 Amborella trichopoda HOM05D000008 ORTHO05D000005 6.5e-06 55.5 54 51.9
Dinv24023 Davidia involucrata HOM05D000008 ORTHO05D000005 6.5e-06 55.5 54 51.9
Duzib128G1081 Durio zibethinus HOM05D000008 ORTHO05D000005 6.5e-06 55.5 54 51.9
Manes.08G145500 Manihot esculenta HOM05D000008 ORTHO05D000005 6.5e-06 55.5 54 50.0
Nitab4.5_0004379g0020 Nicotiana tabacum HOM05D000008 ORTHO05D049403 6.5e-06 55.5 54 50.0
Peaxi162Scf00349g00057 Petunia axillaris HOM05D000008 ORTHO05D000005 6.5e-06 55.5 54 51.9
QL12p011472 Quercus lobata HOM05D000008 ORTHO05D000005 6.5e-06 55.5 60 46.7
SEGI_04218 Sequoiadendron giganteum HOM05D000008 ORTHO05D000005 6.5e-06 55.5 124 29.8
SEGI_08883 Sequoiadendron giganteum HOM05D000008 ORTHO05D000005 6.5e-06 55.5 158 29.1
SEGI_26130 Sequoiadendron giganteum HOM05D000008 ORTHO05D000005 6.5e-06 55.5 158 29.1
TWI32G0234 Tripterygium wilfordii HOM05D000008 ORTHO05D000005 6.5e-06 55.5 54 50.0
TAR352G0006 Trochodendron aralioides HOM05D000008 ORTHO05D000005 6.5e-06 55.5 75 40.0
TAR636G0718 Trochodendron aralioides HOM05D000008 ORTHO05D000005 6.5e-06 55.5 54 51.9
GSVIVG01032467001 Vitis vinifera HOM05D000008 ORTHO05D000005 6.5e-06 55.5 59 50.8
Ah.14g083930 Amaranthus hybridus HOM05D000569 ORTHO05D000418 8.5e-06 55.1 62 46.8
Aqoxy1G00461 Aquilegia oxysepala HOM05D000008 ORTHO05D000005 8.5e-06 55.1 54 50.0
arahy.Tifrunner.gnm1.ann1.A2IWKV Arachis hypogaea HOM05D000008 ORTHO05D000005 8.5e-06 55.1 54 51.9
Carub.0003s1302 Capsella rubella HOM05D000008 ORTHO05D000005 8.5e-06 55.1 170 28.2
ClCG11G010180 Citrullus lanatus HOM05D000008 ORTHO05D000005 8.5e-06 55.1 58 48.3
Ciclev10022303m.g Citrus clementina HOM05D000008 ORTHO05D000005 8.5e-06 55.1 86 38.4
ECA233G3207 Erigeron canadensis HOM05D000008 ORTHO05D000005 8.5e-06 55.1 54 50.0
Hma1.2p1_1723F.1_g299360 Hydrangea macrophylla HOM05D000008 ORTHO05D000005 8.5e-06 55.1 54 50.0
MBI04_g09715_MAGBIO Magnolia biondii HOM05D000008 ORTHO05D000005 8.5e-06 55.1 54 50.0
Manes.02G041300 Manihot esculenta HOM05D000008 ORTHO05D000005 8.5e-06 55.1 66 43.9
Pp3c26_13600 Physcomitrium patens HOM05D000008 ORTHO05D000005 8.5e-06 55.1 54 50.0
Potri.019G036340 Populus trichocarpa HOM05D000008 ORTHO05D000005 8.5e-06 55.1 96 38.5
Potri.019G036400 Populus trichocarpa HOM05D000008 ORTHO05D000005 8.5e-06 55.1 96 38.5
PGR031G1527 Punica granatum HOM05D000008 ORTHO05D000005 8.5e-06 55.1 74 41.9
QL10p027957 Quercus lobata HOM05D000008 ORTHO05D000005 8.5e-06 55.1 54 51.9
Sabra06G0171300 Salix brachista HOM05D000008 ORTHO05D000005 8.5e-06 55.1 129 32.6
SEGI_18861 Sequoiadendron giganteum HOM05D000008 ORTHO05D000005 8.5e-06 55.1 108 32.4
SEGI_36211 Sequoiadendron giganteum HOM05D000008 ORTHO05D000005 8.5e-06 55.1 54 50.0


User provided reference genes

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