Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31206 Sequoiadendron giganteum HOM05D004578 ORTHO05D005529 1.2e-288 995.7 489 100.0
SEGI_11947 Sequoiadendron giganteum HOM05D004578 ORTHO05D005529 2.6e-214 748.8 414 87.9
Pp3c9_3640 Physcomitrium patens HOM05D004578 ORTHO05D005529 4.1e-135 485.7 413 57.4
PSO170G4894 Papaver somniferum HOM05D004578 ORTHO05D005529 3.5e-134 482.6 411 56.2
Nn8g40733 Nelumbo nucifera HOM05D004578 ORTHO05D005529 3.8e-133 479.2 420 55.0
PSO063G3790 Papaver somniferum HOM05D004578 ORTHO05D005529 5.0e-133 478.8 417 55.4
MBI16_g05839_MAGBIO Magnolia biondii HOM05D004578 ORTHO05D005529 1.2e-131 474.2 410 53.9
CANSAT25G1430 Cannabis sativa HOM05D004578 ORTHO05D005529 8.9e-130 468.0 410 53.9
Mapoly0152s0014 Marchantia polymorpha HOM05D004578 ORTHO05D005529 4.9e-128 462.2 407 55.8
TAR625G0669 Trochodendron aralioides HOM05D004578 ORTHO05D005529 1.1e-127 461.1 409 54.3
Ciclev10008459m.g Citrus clementina HOM05D004578 ORTHO05D005529 4.6e-126 455.7 415 53.3
Duzib168G2341 Durio zibethinus HOM05D004578 ORTHO05D005529 5.9e-126 455.3 415 52.8
Thecc.09G008600 Theobroma cacao HOM05D004578 ORTHO05D005529 5.9e-126 455.3 415 52.5
COL.COLO4_19019 Corchorus olitorius HOM05D004578 ORTHO05D005529 1.0e-125 454.5 409 53.5
Gorai.010G121600 Gossypium raimondii HOM05D004578 ORTHO05D005529 3.9e-125 452.6 415 52.5
Sabra06G0211200 Salix brachista HOM05D004578 ORTHO05D005529 5.0e-125 452.2 412 54.1
Aqoxy7G02848 Aquilegia oxysepala HOM05D004578 ORTHO05D005529 8.6e-125 451.4 414 53.1
SMO115G0125 Selaginella moellendorffii HOM05D004578 ORTHO05D005529 3.3e-124 449.5 413 52.3
Gohir.D06G107000 Gossypium hirsutum HOM05D004578 ORTHO05D005529 4.3e-124 449.1 409 52.8
Sp4g03570 Schrenkiella parvula HOM05D004578 ORTHO05D005529 1.6e-123 447.2 412 53.2
Gohir.A06G104800 Gossypium hirsutum HOM05D004578 ORTHO05D005529 3.6e-123 446.0 415 51.8
Cpa.g.sc23.31 Carica papaya HOM05D004578 ORTHO05D005529 1.0e-122 444.5 409 53.1
AL4G15160 Arabidopsis lyrata HOM05D004578 ORTHO05D005529 1.4e-122 444.1 413 52.5
Ciclev10008463m.g Citrus clementina HOM05D004578 ORTHO05D005529 1.4e-122 444.1 418 53.1
Nitab4.5_0000555g0200 Nicotiana tabacum HOM05D004578 ORTHO05D005529 1.8e-122 443.7 410 52.4
Atru.chr7.2661 Acer truncatum HOM05D004578 ORTHO05D005529 4.0e-122 442.6 414 53.6
ATR0626G173 Amborella trichopoda HOM05D004578 ORTHO05D005529 2.6e-121 439.9 407 51.1
BolC4t26970H Brassica oleracea HOM05D004578 ORTHO05D005529 3.4e-121 439.5 411 52.3
Prupe.1G458600 Prunus persica HOM05D004578 ORTHO05D005529 4.4e-121 439.1 412 52.9
A04p18950 Brassica napus HOM05D004578 ORTHO05D005529 5.8e-121 438.7 411 52.3
Carub.0004s0400 Capsella rubella HOM05D004578 ORTHO05D005529 5.8e-121 438.7 412 52.2
Haze_21761 Corylus avellana HOM05D004578 ORTHO05D005529 5.8e-121 438.7 409 53.5
Peaxi162Scf00045g01734 Petunia axillaris HOM05D004578 ORTHO05D005529 5.8e-121 438.7 410 52.0
Potri.018G008700 Populus trichocarpa HOM05D004578 ORTHO05D005529 5.8e-121 438.7 407 52.1
BraA04t17495Z Brassica rapa HOM05D004578 ORTHO05D005529 7.5e-121 438.3 411 52.3
CARHR117360 Cardamine hirsuta HOM05D004578 ORTHO05D005529 7.5e-121 438.3 412 51.0
BcaC02g08438 Brassica carinata HOM05D004578 ORTHO05D005529 9.8e-121 438.0 411 52.1
C04p54190 Brassica napus HOM05D004578 ORTHO05D005529 9.8e-121 438.0 411 52.1
TAR383G0560 Trochodendron aralioides HOM05D004578 ORTHO05D005529 9.8e-121 438.0 404 53.5
CSS0030954 Camellia sinensis var. sinensis HOM05D004578 ORTHO05D005529 1.3e-120 437.6 413 51.6
AagrBONN_evm.TU.Sc2ySwM_368.3376 Anthoceros agrestis HOM05D004578 ORTHO05D005529 1.7e-120 437.2 401 53.9
BcaB06g27986 Brassica carinata HOM05D004578 ORTHO05D005529 3.7e-120 436.0 409 52.1
Cc08_g06480 Coffea canephora HOM05D004578 ORTHO05D005529 3.7e-120 436.0 410 52.2
Sabra18G0013200 Salix brachista HOM05D004578 ORTHO05D005529 4.9e-120 435.6 409 50.9
Sabra18G0015700 Salix brachista HOM05D004578 ORTHO05D005529 4.9e-120 435.6 409 50.9
AT2G24580 Arabidopsis thaliana HOM05D004578 ORTHO05D005529 6.4e-120 435.3 412 51.5
Thhalv10000150m.g Eutrema salsugineum HOM05D004578 ORTHO05D005529 6.4e-120 435.3 410 51.7
FAN20G1103 Fragaria x ananassa HOM05D004578 ORTHO05D005529 1.1e-119 434.5 414 52.2
TAR383G1032 Trochodendron aralioides HOM05D004578 ORTHO05D005529 1.4e-119 434.1 404 53.5
vmacro18918 Vaccinium macrocarpon HOM05D004578 ORTHO05D005529 1.4e-119 434.1 417 52.0
FAN15G2443 Fragaria x ananassa HOM05D004578 ORTHO05D005529 1.9e-119 433.7 411 52.6
Manes.16G134500 Manihot esculenta HOM05D004578 ORTHO05D005529 1.9e-119 433.7 415 50.8
TWI32G0020 Tripterygium wilfordii HOM05D004578 ORTHO05D005529 2.4e-119 433.3 409 51.1
Dinv04517 Davidia involucrata HOM05D004578 ORTHO05D005529 4.1e-119 432.6 420 51.2
Aa31sc715G30 Aethionema arabicum HOM05D004578 ORTHO05D005529 7.0e-119 431.8 412 51.2
Cfa013287 Carpinus fangiana HOM05D004578 ORTHO05D005529 1.6e-118 430.6 406 51.5
ClCG05G026450 Citrullus lanatus HOM05D004578 ORTHO05D005529 1.6e-118 430.6 409 50.1
MD15G1106400 Malus domestica HOM05D004578 ORTHO05D005529 2.0e-118 430.3 409 51.8
Prupe.1G458900 Prunus persica HOM05D004578 ORTHO05D005529 2.7e-118 429.9 414 51.4
MD08G1126500 Malus domestica HOM05D004578 ORTHO05D005529 3.5e-118 429.5 410 52.0
PGR044G1507 Punica granatum HOM05D004578 ORTHO05D005529 3.5e-118 429.5 412 51.5
THA.LOC104819936 Tarenaya hassleriana HOM05D004578 ORTHO05D005529 3.5e-118 429.5 410 51.0
Aa31sc160G30 Aethionema arabicum HOM05D004578 ORTHO05D005529 7.8e-118 428.3 409 50.6
Lj7P748T39 Lonicera japonica HOM05D004578 ORTHO05D005529 7.8e-118 428.3 401 52.6
QL12p025440 Quercus lobata HOM05D004578 ORTHO05D005529 7.8e-118 428.3 407 50.9
DCAR_000687 Daucus carota HOM05D004578 ORTHO05D005529 1.0e-117 427.9 417 50.1
FAN27G0985 Fragaria x ananassa HOM05D004578 ORTHO05D005529 1.0e-117 427.9 414 51.9
FvH4_2g36660 Fragaria vesca HOM05D004578 ORTHO05D005529 3.0e-117 426.4 414 51.9
Potri.006G272800 Populus trichocarpa HOM05D004578 ORTHO05D005529 3.9e-117 426.0 407 51.6
AUR62020290 Chenopodium quinoa HOM05D004578 ORTHO05D005529 1.1e-116 424.5 407 51.6
AUR62037713 Chenopodium quinoa HOM05D004578 ORTHO05D005529 1.1e-116 424.5 407 51.4
CiPaw.07G211300 Carya illinoinensis HOM05D004578 ORTHO05D005529 1.9e-116 423.7 408 51.2
EL10Ac2g02417 Beta vulgaris HOM05D004578 ORTHO05D005529 2.5e-116 423.3 408 51.7
Cfa013284 Carpinus fangiana HOM05D004578 ORTHO05D005529 3.3e-116 422.9 406 50.2
CAN.G673.19 Capsicum annuum HOM05D004578 ORTHO05D005529 4.3e-116 422.5 408 50.0
CDE02G4459 Ceratophyllum demersum HOM05D004578 ORTHO05D005529 5.6e-116 422.2 395 52.4
CsaV3_3G047160 Cucumis sativus L. HOM05D004578 ORTHO05D005529 5.6e-116 422.2 409 48.7
Manes.03G004800 Manihot esculenta HOM05D004578 ORTHO05D005529 7.3e-116 421.8 407 49.6
Solyc08g006430.4 Solanum lycopersicum HOM05D004578 ORTHO05D005529 7.3e-116 421.8 409 48.9
Sed0023873 Sechium edule HOM05D004578 ORTHO05D005529 1.2e-115 421.0 409 50.1
Cc00_g13120 Coffea canephora HOM05D004578 ORTHO05D005529 2.8e-115 419.9 406 50.0
MELO3C003620.2 Cucumis melo HOM05D004578 ORTHO05D005529 2.8e-115 419.9 410 48.8
Ah.13g067790 Amaranthus hybridus HOM05D004578 ORTHO05D005529 3.6e-115 419.5 411 51.3
MBI13_g34048_MAGBIO Magnolia biondii HOM05D004578 ORTHO05D005529 8.1e-115 418.3 408 49.5
Sopen08g002370 Solanum pennellii HOM05D004578 ORTHO05D005529 8.1e-115 418.3 411 49.1
Rhsim10G0084800 Rhododendron simsii HOM05D004578 ORTHO05D005529 1.4e-114 417.5 400 50.5
Nitab4.5_0004131g0050 Nicotiana tabacum HOM05D004578 ORTHO05D005529 2.3e-114 416.8 398 49.7
QL12p025516 Quercus lobata HOM05D004578 ORTHO05D005529 2.3e-114 416.8 412 49.5
Migut.A00428 Erythranthe guttata HOM05D004578 ORTHO05D005529 4.0e-114 416.0 407 49.9
PGSC0003DMG400026320 Solanum tuberosum HOM05D004578 ORTHO05D005529 1.2e-113 414.5 410 49.5
Eucgr.C04012 Eucalyptus grandis HOM05D004578 ORTHO05D005529 1.5e-113 414.1 417 49.4
Actinidia06432 Actinidia chinensis HOM05D004578 ORTHO05D005529 2.0e-113 413.7 418 47.6
Cfa013283 Carpinus fangiana HOM05D004578 ORTHO05D005529 9.8e-113 411.4 397 49.9
Hund13109 Selenicereus undatus HOM05D004578 ORTHO05D005529 1.7e-112 410.6 409 48.7
MSTRG.25795 Avicennia marina HOM05D004578 ORTHO05D005529 2.7e-110 403.3 408 48.5
BcaC02g08437 Brassica carinata HOM05D004578 ORTHO05D005529 2.7e-110 403.3 408 49.3
Lsat_1_v5_gn_9_4341 Lactuca sativa HOM05D004578 ORTHO05D005529 4.6e-110 402.5 425 48.0
CiPaw.08G020700 Carya illinoinensis HOM05D004578 ORTHO05D005529 6.0e-110 402.1 406 50.2
ECA247G3559 Erigeron canadensis HOM05D004578 ORTHO05D005529 2.3e-109 400.2 422 48.6
Eucgr.C04016 Eucalyptus grandis HOM05D004578 ORTHO05D005529 1.1e-108 397.9 402 48.0
Eucgr.C04014 Eucalyptus grandis HOM05D004578 ORTHO05D005529 1.5e-108 397.5 400 49.0
HanXRQChr15g0466441 Helianthus annuus HOM05D004578 ORTHO05D005529 1.5e-108 397.5 425 46.6
Sc07g0007360 Simmondsia chinensis HOM05D004578 ORTHO05D005529 7.3e-108 395.2 406 48.3
SalBow4G0906 Salvia bowleyana HOM05D004578 ORTHO05D005529 1.2e-107 394.4 409 48.9
arahy.Tifrunner.gnm1.ann1.M0AD1K Arachis hypogaea HOM05D004578 ORTHO05D005529 2.1e-107 393.7 402 48.8
SGA_v2.0_scaffold193G40672 Striga asiatica HOM05D004578 ORTHO05D005529 3.6e-107 392.9 408 46.8
arahy.Tifrunner.gnm1.ann1.W2ETIH Arachis hypogaea HOM05D004578 ORTHO05D005529 8.1e-107 391.7 402 49.0
Lj1g0024454 Lotus japonicus HOM05D004578 ORTHO05D005529 1.5e-105 387.5 395 48.1
Phvul.009G102000 Phaseolus vulgaris HOM05D004578 ORTHO05D005529 7.6e-105 385.2 395 47.1
Glyma.04G076300 Glycine max HOM05D004578 ORTHO05D005529 1.3e-104 384.4 400 45.8
Medtr3g108990 Medicago truncatula HOM05D004578 ORTHO05D005529 1.7e-104 384.0 395 47.1
RcHm_v2.0_Chr6g0305131 Rosa chinensis HOM05D004578 ORTHO05D005529 2.9e-104 383.3 409 47.7
VMungo1309G1783 Vigna mungo HOM05D004578 ORTHO05D005529 8.4e-104 381.7 395 46.8
Psat5g024080 Pisum sativum HOM05D004578 ORTHO05D005529 4.1e-103 379.4 394 46.7
HanXRQChr10g0282951 Helianthus annuus HOM05D004578 ORTHO05D005529 9.2e-103 378.3 421 46.3
Os09g0498500 Oryza sativa ssp. japonica HOM05D004578 ORTHO05D005529 9.2e-103 378.3 418 48.6
Ca_15651_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 1.2e-102 377.9 395 46.1
Ca_15659_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 1.2e-102 377.9 395 46.1
unitig_32.g11237 Utricularia gibba HOM05D004578 ORTHO05D005529 5.1e-101 372.5 396 47.2
TPR.G12360 Trifolium pratense HOM05D004578 ORTHO05D005529 1.5e-100 370.9 401 43.4
Ca_15652_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 5.6e-100 369.0 384 47.4
Ca_15660_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 5.6e-100 369.0 384 47.4
TPR.G12429 Trifolium pratense HOM05D004578 ORTHO05D005529 2.1e-99 367.1 397 45.6
Medtr3g109010 Medicago truncatula HOM05D004578 ORTHO05D005529 2.8e-99 366.7 401 43.9
Zm00001eb317190 Zea mays HOM05D004578 ORTHO05D005529 6.2e-99 365.5 416 46.4
Actinidia22261 Actinidia chinensis HOM05D004578 ORTHO05D005529 1.1e-98 364.8 417 43.9
Prupe.1G458800 Prunus persica HOM05D004578 ORTHO05D005529 8.9e-98 361.7 415 47.2
Os12g0543600 Oryza sativa ssp. japonica HOM05D004578 ORTHO05D005529 7.8e-94 348.6 388 49.2
Os01g0316100 Oryza sativa ssp. japonica HOM05D004578 ORTHO05D005529 2.8e-91 340.1 408 44.9
Zm00001eb127180 Zea mays HOM05D004578 ORTHO05D005529 1.8e-90 337.4 407 45.2
Lalb_Chr11g0064181 Lupinus albus HOM05D004578 ORTHO05D005529 2.2e-88 330.5 403 42.7
Zm00001eb340420 Zea mays HOM05D004578 ORTHO05D005529 5.1e-85 319.3 400 43.5
Zm00001eb140430 Zea mays HOM05D004578 ORTHO05D005529 4.8e-83 312.8 415 41.9
PRCOL_00000645 Prasinoderma coloniale HOM05D004578 ORTHO05D005529 1.9e-68 264.2 445 35.7
HPP92_017393 Vanilla planifolia HOM05D004578 ORTHO05D005529 4.5e-65 253.1 402 37.8
Gohir.D06G106866 Gossypium hirsutum HOM05D004578 ORTHO05D005529 1.0e-64 251.9 417 36.7
Oeu008773.1 Olea europaea HOM05D004578 ORTHO05D005529 6.7e-61 239.2 412 36.4
Oeu018556.1 Olea europaea HOM05D004578 ORTHO05D005529 3.3e-60 236.9 409 35.7
Gorai.010G121400 Gossypium raimondii HOM05D004578 ORTHO05D005529 8.2e-59 232.3 301 40.9
Psat5g025320 Pisum sativum HOM05D004578 ORTHO05D005529 6.9e-58 229.2 252 43.7
Hma1.2p1_1588F.1_g292320 Hydrangea macrophylla HOM05D004578 ORTHO05D005529 4.2e-55 219.9 409 34.5
GSVIVG01033177001 Vitis vinifera HOM05D004578 ORTHO05D005529 4.2e-55 219.9 407 32.9
unitig_32.g11239 Utricularia gibba HOM05D004578 ORTHO05D005529 3.4e-49 200.3 191 47.1
Cfa013285 Carpinus fangiana HOM05D004578 ORTHO05D005529 1.6e-41 174.9 227 43.2
Lalb_Chr23g0269171 Lupinus albus HOM05D004578 ORTHO05D005529 8.8e-37 159.1 164 47.0
Ca_28680_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 2.4e-34 151.0 378 29.1
HanXRQChr10g0282961 Helianthus annuus HOM05D004578 ORTHO05D005529 4.0e-29 133.7 164 42.7
unitig_32.g11238 Utricularia gibba HOM05D004578 ORTHO05D005529 1.2e-25 122.1 91 62.6
Cre12.g493500 Chlamydomonas reinhardtii HOM05D004578 ORTHO05D005529 7.7e-25 119.4 411 26.8
TPR.G12332 Trifolium pratense HOM05D004578 ORTHO05D005529 3.0e-21 107.5 78 60.3
Cc08_g06580 Coffea canephora HOM05D004578 ORTHO05D005529 6.8e-21 106.3 126 42.1
Actinidia22262 Actinidia chinensis HOM05D004578 ORTHO05D005529 3.6e-14 84.0 329 24.0
VMungo1041G0001 Vigna mungo HOM05D004578 ORTHO05D005529 8.0e-06 56.2 48 66.7


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