Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 7.5e-183 643.7 313 100.0
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 1.3e-118 430.3 297 69.7
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 2.2e-118 429.5 296 69.9
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 4.2e-117 425.2 296 69.6
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 7.2e-117 424.5 298 68.8
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 7.2e-117 424.5 308 67.2
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 1.2e-116 423.7 297 68.4
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.6e-116 423.3 297 68.7
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.6e-116 423.3 297 68.7
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 2.1e-116 422.9 296 68.6
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 2.1e-116 422.9 298 68.1
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 3.6e-116 422.2 299 67.6
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 4.7e-116 421.8 297 68.4
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 6.1e-116 421.4 303 67.3
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 8.0e-116 421.0 299 68.2
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 1.0e-115 420.6 297 68.0
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 1.0e-115 420.6 294 69.7
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 1.4e-115 420.2 303 67.3
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 1.4e-115 420.2 299 69.9
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 1.8e-115 419.9 306 67.6
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 2.3e-115 419.5 297 68.0
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 3.0e-115 419.1 296 68.6
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 3.0e-115 419.1 294 69.0
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 3.9e-115 418.7 297 67.3
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 5.2e-115 418.3 299 68.2
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 6.7e-115 417.9 303 67.0
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 6.7e-115 417.9 302 66.6
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 8.8e-115 417.5 299 68.2
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 1.5e-114 416.8 297 68.4
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 1.5e-114 416.8 299 67.9
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 2.0e-114 416.4 292 68.8
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 2.6e-114 416.0 292 68.2
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 2.6e-114 416.0 292 68.2
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 2.6e-114 416.0 298 67.1
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 2.6e-114 416.0 299 67.2
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 7.4e-114 414.5 290 67.2
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 9.7e-114 414.1 293 68.6
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 1.3e-113 413.7 292 68.8
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 1.3e-113 413.7 298 66.8
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 1.7e-113 413.3 299 66.9
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 2.2e-113 412.9 291 68.4
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 6.3e-113 411.4 292 68.8
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 8.2e-113 411.0 313 64.5
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 1.4e-112 410.2 291 67.7
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 1.8e-112 409.8 303 65.3
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 1.8e-112 409.8 317 64.4
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 3.1e-112 409.1 314 65.6
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 4.1e-112 408.7 296 67.2
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 4.1e-112 408.7 307 65.5
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 5.3e-112 408.3 293 67.9
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 5.3e-112 408.3 290 66.6
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 1.2e-111 407.1 304 64.8
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 1.6e-111 406.8 298 66.8
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 2.0e-111 406.4 296 66.6
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 2.0e-111 406.4 293 67.9
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 2.6e-111 406.0 292 65.4
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 4.5e-111 405.2 287 66.2
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 7.7e-111 404.4 304 64.1
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 7.7e-111 404.4 318 62.3
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 7.7e-111 404.4 290 67.6
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 2.2e-110 402.9 287 66.2
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 3.8e-110 402.1 306 66.7
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 5.0e-110 401.7 293 64.5
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 1.5e-109 400.2 294 64.3
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 2.5e-109 399.4 293 64.8
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 4.2e-109 398.7 292 64.0
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 4.2e-109 398.7 324 63.3
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 4.2e-109 398.7 292 64.7
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 4.2e-109 398.7 305 65.6
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 5.5e-109 398.3 287 64.8
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 7.2e-109 397.9 289 65.1
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 7.2e-109 397.9 292 64.0
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 1.2e-108 397.1 289 65.1
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 1.2e-108 397.1 289 65.1
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 1.2e-108 397.1 279 69.2
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 1.2e-108 397.1 292 64.4
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 2.1e-108 396.4 289 64.4
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 2.1e-108 396.4 289 65.1
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 2.7e-108 396.0 290 63.4
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 4.7e-108 395.2 290 67.2
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 6.1e-108 394.8 289 64.7
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 6.1e-108 394.8 289 64.7
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 4.0e-107 392.1 307 61.9
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 1.5e-106 390.2 293 62.5
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 5.7e-106 388.3 287 64.8
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 5.7e-106 388.3 305 65.6
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 1.7e-105 386.7 347 57.6
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 2.8e-105 386.0 305 61.3
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 8.2e-105 384.4 297 63.0
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 8.2e-105 384.4 300 61.3
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 1.4e-104 383.6 331 61.6
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 4.1e-104 382.1 302 64.2
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 9.1e-104 380.9 314 59.6
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 3.8e-102 375.6 268 68.3
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 8.5e-102 374.4 265 65.7
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 4.0e-99 365.5 288 62.5
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 1.4e-91 340.5 301 58.5
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 1.0e-83 314.3 213 67.6
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 3.5e-79 299.3 259 57.5
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 8.6e-78 294.7 194 70.6
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 1.4e-75 287.3 200 65.0
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 2.1e-71 273.5 198 64.1
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 1.9e-61 240.4 185 63.2
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 1.4e-56 224.2 159 65.4
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 3.8e-49 199.5 149 68.5
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 3.3e-45 186.4 152 56.6
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 1.9e-40 170.6 149 60.4
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 6.7e-38 162.2 143 61.5
CAN.G298.53 Capsicum annuum HOM05D006814 ORTHO05D008613 2.1e-28 130.6 119 59.7
CAN.G298.50 Capsicum annuum HOM05D006814 ORTHO05D008613 1.5e-26 124.4 110 60.9
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 1.6e-23 114.4 335 25.1
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 5.1e-22 109.4 300 26.3
PRCOL_00006064 Prasinoderma coloniale HOM05D006814 ORTHO05D008613 1.1e-21 108.2 320 26.9
Actinidia25984 Actinidia chinensis HOM05D006814 ORTHO05D008613 3.3e-21 106.7 79 72.2
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 7.4e-21 105.5 109 50.5
CAN.G2435.1 Capsicum annuum HOM05D006814 ORTHO05D008613 4.8e-20 102.8 93 61.3
Actinidia25985 Actinidia chinensis HOM05D006814 ORTHO05D008613 6.9e-19 99.0 63 71.4
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 1.5e-18 97.8 73 64.4


User provided reference genes

Program Settings