Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_29467 Sequoiadendron giganteum HOM05D004953 ORTHO05D006193 0.0e+00 1944.5 988 100.0
SMO201G0221 Selaginella moellendorffii HOM05D004953 ORTHO05D006193 1.1e-200 704.5 869 44.8
Mapoly0032s0035 Marchantia polymorpha HOM05D004953 ORTHO05D006193 3.5e-194 682.9 899 41.8
Pp3c2_410 Physcomitrium patens HOM05D004953 ORTHO05D006193 2.4e-190 670.2 897 41.9
MBI10_g23576_MAGBIO Magnolia biondii HOM05D004953 ORTHO05D006193 1.8e-185 654.1 944 39.9
Dinv28790 Davidia involucrata HOM05D004953 ORTHO05D006193 2.5e-184 650.2 940 40.6
COL.COLO4_34276 Corchorus olitorius HOM05D004953 ORTHO05D006193 9.7e-184 648.3 922 40.2
Nn1g09452 Nelumbo nucifera HOM05D004953 ORTHO05D006193 1.6e-183 647.5 932 40.5
CSS0012001 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 6.3e-183 645.6 954 40.7
CSS0005222 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 1.8e-182 644.0 954 40.6
Prupe.8G186900 Prunus persica HOM05D004953 ORTHO05D006193 2.4e-182 643.7 924 40.3
RcHm_v2.0_Chr6g0282191 Rosa chinensis HOM05D004953 ORTHO05D006193 6.9e-182 642.1 899 40.4
Rhsim13G0055000 Rhododendron simsii HOM05D004953 ORTHO05D006193 1.2e-181 641.3 941 40.1
AUR62028642 Chenopodium quinoa HOM05D004953 ORTHO05D006193 2.6e-181 640.2 939 39.9
HanXRQChr12g0363951 Helianthus annuus HOM05D004953 ORTHO05D006193 4.5e-181 639.4 947 40.2
MD05G1153500 Malus domestica HOM05D004953 ORTHO05D006193 5.0e-180 636.0 914 39.3
Oeu013420.1 Olea europaea HOM05D004953 ORTHO05D006193 6.5e-180 635.6 956 38.7
Aqoxy2G04177 Aquilegia oxysepala HOM05D004953 ORTHO05D006193 5.5e-179 632.5 896 40.3
Migut.D00772 Erythranthe guttata HOM05D004953 ORTHO05D006193 7.2e-179 632.1 950 39.2
Solyc09g042760.2 Solanum lycopersicum HOM05D004953 ORTHO05D006193 1.2e-178 631.3 865 41.0
Lj2C1111T4 Lonicera japonica HOM05D004953 ORTHO05D006193 1.6e-178 630.9 945 38.3
Duzib133G0915 Durio zibethinus HOM05D004953 ORTHO05D006193 2.1e-178 630.6 923 39.3
CAN.G1468.3 Capsicum annuum HOM05D004953 ORTHO05D006193 2.7e-178 630.2 872 41.2
PGSC0003DMG400021911 Solanum tuberosum HOM05D004953 ORTHO05D006193 2.7e-178 630.2 913 40.1
CANSAT01G2219 Cannabis sativa HOM05D004953 ORTHO05D006193 3.6e-178 629.8 953 38.2
Haze_03508 Corylus avellana HOM05D004953 ORTHO05D006193 1.0e-177 628.2 939 39.4
Gorai.007G161300 Gossypium raimondii HOM05D004953 ORTHO05D006193 1.0e-177 628.2 946 39.1
Cfa010574 Carpinus fangiana HOM05D004953 ORTHO05D006193 1.4e-177 627.9 958 38.7
Sopen09g015810 Solanum pennellii HOM05D004953 ORTHO05D006193 1.8e-177 627.5 914 39.8
Lj1g0025378 Lotus japonicus HOM05D004953 ORTHO05D006193 2.3e-177 627.1 947 38.9
Peaxi162Scf02239g00020 Petunia axillaris HOM05D004953 ORTHO05D006193 3.0e-177 626.7 869 40.4
Cc01_g15850 Coffea canephora HOM05D004953 ORTHO05D006193 5.1e-177 625.9 942 39.9
FvH4_2g17460 Fragaria vesca HOM05D004953 ORTHO05D006193 4.3e-176 622.9 912 39.6
FAN24G2388 Fragaria x ananassa HOM05D004953 ORTHO05D006193 4.3e-176 622.9 939 39.1
Nitab4.5_0008926g0010 Nicotiana tabacum HOM05D004953 ORTHO05D006193 1.7e-175 620.9 936 39.9
EL10Ac5g10584 Beta vulgaris HOM05D004953 ORTHO05D006193 4.8e-175 619.4 944 39.0
Ciclev10018269m.g Citrus clementina HOM05D004953 ORTHO05D006193 4.8e-175 619.4 940 39.9
CiPaw.13G055800 Carya illinoinensis HOM05D004953 ORTHO05D006193 6.3e-175 619.0 934 38.5
Medtr7g080880 Medicago truncatula HOM05D004953 ORTHO05D006193 1.1e-174 618.2 920 38.6
Nitab4.5_0000038g0380 Nicotiana tabacum HOM05D004953 ORTHO05D006193 1.1e-174 618.2 872 41.4
FAN15G1962 Fragaria x ananassa HOM05D004953 ORTHO05D006193 2.4e-174 617.1 929 39.3
AUR62008065 Chenopodium quinoa HOM05D004953 ORTHO05D006193 3.1e-174 616.7 940 39.4
Thhalv10005371m.g Eutrema salsugineum HOM05D004953 ORTHO05D006193 4.1e-174 616.3 949 38.5
FAN27G2958 Fragaria x ananassa HOM05D004953 ORTHO05D006193 4.1e-174 616.3 939 38.9
Ca_08034_v3 Cicer arietinum L. HOM05D004953 ORTHO05D006193 5.3e-174 615.9 919 38.5
Eucgr.K00106 Eucalyptus grandis HOM05D004953 ORTHO05D006193 5.3e-174 615.9 898 39.2
VMungo1383G3652 Vigna mungo HOM05D004953 ORTHO05D006193 6.9e-174 615.5 942 38.1
Thecc.01G207300 Theobroma cacao HOM05D004953 ORTHO05D006193 1.5e-173 614.4 874 40.2
Cpa.g.sc8.38 Carica papaya HOM05D004953 ORTHO05D006193 2.0e-173 614.0 878 40.1
SalBow3G1227 Salvia bowleyana HOM05D004953 ORTHO05D006193 3.4e-173 613.2 873 40.0
Hund02809 Selenicereus undatus HOM05D004953 ORTHO05D006193 4.5e-173 612.8 934 38.7
SGA_v2.0_scaffold8G04488 Striga asiatica HOM05D004953 ORTHO05D006193 4.5e-173 612.8 940 39.5
vmacro02841 Vaccinium macrocarpon HOM05D004953 ORTHO05D006193 4.5e-173 612.8 969 39.1
AT5G48390 Arabidopsis thaliana HOM05D004953 ORTHO05D006193 1.3e-172 611.3 890 39.0
CARHR183800 Cardamine hirsuta HOM05D004953 ORTHO05D006193 6.5e-172 609.0 941 38.4
Manes.13G056300 Manihot esculenta HOM05D004953 ORTHO05D006193 6.5e-172 609.0 875 39.8
THA.LOC104819011 Tarenaya hassleriana HOM05D004953 ORTHO05D006193 6.5e-172 609.0 929 38.4
Potri.014G175350 Populus trichocarpa HOM05D004953 ORTHO05D006193 1.4e-171 607.8 936 38.6
QL09p045412 Quercus lobata HOM05D004953 ORTHO05D006193 3.2e-171 606.7 986 37.0
Sc17g0001570 Simmondsia chinensis HOM05D004953 ORTHO05D006193 5.5e-171 605.9 945 38.3
Sabra14G0134100 Salix brachista HOM05D004953 ORTHO05D006193 9.4e-171 605.1 932 39.5
AL8G21200 Arabidopsis lyrata HOM05D004953 ORTHO05D006193 1.2e-170 604.7 951 38.0
PSO478G1281 Papaver somniferum HOM05D004953 ORTHO05D006193 1.2e-170 604.7 939 39.3
C07p39140 Brassica napus HOM05D004953 ORTHO05D006193 2.1e-170 604.0 940 37.9
BolC7t44434H Brassica oleracea HOM05D004953 ORTHO05D006193 2.1e-170 604.0 940 37.9
Glyma.18G246600 Glycine max HOM05D004953 ORTHO05D006193 2.1e-170 604.0 945 37.7
PSO017G6601 Papaver somniferum HOM05D004953 ORTHO05D006193 3.6e-170 603.2 939 39.1
Carub.0008s0798 Capsella rubella HOM05D004953 ORTHO05D006193 6.1e-170 602.4 934 37.9
Atru.BG.40.p Acer truncatum HOM05D004953 ORTHO05D006193 1.8e-169 600.9 925 39.7
Lsat_1_v5_gn_8_98501 Lactuca sativa HOM05D004953 ORTHO05D006193 1.8e-169 600.9 939 38.4
A06p39200 Brassica napus HOM05D004953 ORTHO05D006193 2.6e-168 597.0 937 37.5
CsaV3_2G009520 Cucumis sativus L. HOM05D004953 ORTHO05D006193 2.6e-168 597.0 866 38.6
Sp2g18750 Schrenkiella parvula HOM05D004953 ORTHO05D006193 3.3e-168 596.7 946 37.5
TWI36G1252 Tripterygium wilfordii HOM05D004953 ORTHO05D006193 1.1e-166 591.7 955 37.5
MELO3C008751.2 Cucumis melo HOM05D004953 ORTHO05D006193 1.4e-166 591.3 866 37.8
TPR.G35843 Trifolium pratense HOM05D004953 ORTHO05D006193 2.4e-166 590.5 923 37.9
ECA236G0268 Erigeron canadensis HOM05D004953 ORTHO05D006193 3.1e-166 590.1 943 38.1
HPP92_001916 Vanilla planifolia HOM05D004953 ORTHO05D006193 5.3e-166 589.3 950 39.1
Aa31LG11G3580 Aethionema arabicum HOM05D004953 ORTHO05D006193 5.9e-165 585.9 872 38.8
Sed0024263 Sechium edule HOM05D004953 ORTHO05D006193 2.2e-164 583.9 908 37.7
Gohir.A11G144000 Gossypium hirsutum HOM05D004953 ORTHO05D006193 3.2e-163 580.1 821 40.2
Psat3g100880 Pisum sativum HOM05D004953 ORTHO05D006193 4.2e-163 579.7 945 37.2
SHI10219 Sapria himalayana HOM05D004953 ORTHO05D006193 3.6e-162 576.6 971 37.1
arahy.Tifrunner.gnm1.ann1.57Z9Z9 Arachis hypogaea HOM05D004953 ORTHO05D006193 1.4e-161 574.7 999 35.7
ClCG11G010960 Citrullus lanatus HOM05D004953 ORTHO05D006193 4.2e-155 553.1 912 36.7
unitig_52.g16794 Utricularia gibba HOM05D004953 ORTHO05D006193 9.4e-155 552.0 864 36.9
TAR365G0304 Trochodendron aralioides HOM05D004953 ORTHO05D006193 1.8e-153 547.7 763 41.4
CDE07G1537 Ceratophyllum demersum HOM05D004953 ORTHO05D006193 2.7e-149 533.9 944 37.4
GSVIVG01001528001 Vitis vinifera HOM05D004953 ORTHO05D006193 3.5e-149 533.5 849 38.9
Aa31LG11G8930 Aethionema arabicum HOM05D004953 ORTHO05D006193 5.0e-148 529.6 879 36.5
ATR0743G003 Amborella trichopoda HOM05D004953 ORTHO05D006193 6.8e-145 519.2 927 35.8
Phvul.008G050500 Phaseolus vulgaris HOM05D004953 ORTHO05D006193 1.7e-143 514.6 753 38.8
Gohir.D11G150400 Gossypium hirsutum HOM05D004953 ORTHO05D006193 1.9e-139 501.1 748 39.7
Os01g0890900 Oryza sativa ssp. japonica HOM05D004953 ORTHO05D006193 1.6e-138 498.0 864 36.3
Sed0015090 Sechium edule HOM05D004953 ORTHO05D006193 9.8e-136 488.8 842 34.2
Actinidia04690 Actinidia chinensis HOM05D004953 ORTHO05D006193 6.4e-135 486.1 685 41.0
BcaC06g30800 Brassica carinata HOM05D004953 ORTHO05D006193 1.1e-131 475.3 827 35.2
DCAR_004775 Daucus carota HOM05D004953 ORTHO05D006193 4.9e-127 459.9 693 39.2
Ah.11g050790 Amaranthus hybridus HOM05D004953 ORTHO05D006193 3.3e-123 447.2 660 40.5
Zm00001eb145140 Zea mays HOM05D004953 ORTHO05D006193 1.5e-104 385.2 716 36.5
Lalb_Chr03g0040541 Lupinus albus HOM05D004953 ORTHO05D006193 1.4e-97 362.1 491 42.2
Actinidia33395 Actinidia chinensis HOM05D004953 ORTHO05D006193 2.5e-67 261.5 388 39.4
Actinidia33396 Actinidia chinensis HOM05D004953 ORTHO05D006193 4.3e-67 260.8 383 39.7
Lalb_Chr03g0040531 Lupinus albus HOM05D004953 ORTHO05D006193 2.2e-66 258.5 472 35.4
Glyma.09G246350 Glycine max HOM05D004953 ORTHO05D006193 1.1e-65 256.1 419 35.8
CANSAT01G2868 Cannabis sativa HOM05D004953 ORTHO05D006193 1.2e-53 216.1 462 30.1
Actinidia23342 Actinidia chinensis HOM05D004953 ORTHO05D006193 7.2e-46 190.3 428 31.8
Actinidia12854 Actinidia chinensis HOM05D004953 ORTHO05D006193 9.4e-38 163.3 226 42.0
FAN15G1853 Fragaria x ananassa HOM05D004953 ORTHO05D006193 2.8e-29 135.2 173 41.0
MCO15G701 Micromonas commoda HOM05D004953 ORTHO05D006193 3.4e-27 128.3 899 22.9
FAN24G3373 Fragaria x ananassa HOM05D004953 ORTHO05D006193 9.2e-25 120.2 142 41.5
FvH4_2g09600 Fragaria vesca HOM05D004953 ORTHO05D006193 3.5e-24 118.2 141 41.1
PRCOL_00006857 Prasinoderma coloniale HOM05D004953 ORTHO05D006193 4.0e-20 104.8 519 24.7
SMO203G0177 Selaginella moellendorffii HOM05D004953 ORTHO05D006193 1.2e-16 93.2 429 25.9
TPR.G1778 Trifolium pratense HOM05D004953 ORTHO05D019267 1.9e-14 85.9 108 44.4
FvH4_6g36680 Fragaria vesca HOM05D004953 ORTHO05D006193 2.8e-13 82.0 63 52.4
TAR365G0721 Trochodendron aralioides HOM05D004953 ORTHO05D006193 1.4e-12 79.7 135 37.8
FvH4_4g15200 Fragaria vesca HOM05D004953 ORTHO05D006193 5.8e-11 74.3 140 35.0
Actinidia23343 Actinidia chinensis HOM05D004953 ORTHO05D006193 9.8e-11 73.6 144 35.4
Pp3c19_1150 Physcomitrium patens HOM05D004953 ORTHO05D006193 1.3e-10 73.2 90 42.2
FAN14G2572 Fragaria x ananassa HOM05D004953 ORTHO05D006193 2.9e-10 72.0 72 47.2
FvH4_6g27414 Fragaria vesca HOM05D004953 ORTHO05D006193 3.7e-10 71.6 72 47.2
SMO203G0202 Selaginella moellendorffii HOM05D003498 ORTHO05D006193 1.4e-09 69.7 68 55.9
FvH4_6g36881 Fragaria vesca HOM05D004953 ORTHO05D006193 7.0e-09 67.4 72 44.4
FvH4_4g10312 Fragaria vesca HOM05D004953 ORTHO05D006193 1.6e-08 66.2 72 43.1
FAN11G3683 Fragaria x ananassa HOM05D004953 ORTHO05D006193 2.7e-08 65.5 72 41.7
FvH4_2g12761 Fragaria vesca HOM05D004953 ORTHO05D006193 3.5e-08 65.1 72 41.7
Actinidia12853 Actinidia chinensis HOM05D001772 ORTHO05D000476 2.3e-07 62.4 116 35.3
FAN14G2335 Fragaria x ananassa HOM05D004953 ORTHO05D006193 2.3e-07 62.4 126 33.3
Actinidia29995 Actinidia chinensis HOM05D004953 ORTHO05D006193 3.0e-07 62.0 111 34.2


User provided reference genes

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