Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_29251 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 5.8e-208 727.6 455 100.0
Mapoly0010s0010 Marchantia polymorpha HOM05D005952 ORTHO05D007262 1.2e-99 367.9 264 69.7
ATR0561G264 Amborella trichopoda HOM05D005952 ORTHO05D007262 5.4e-97 359.0 273 67.0
MBI11_g07451_MAGBIO Magnolia biondii HOM05D005952 ORTHO05D007262 2.7e-96 356.7 269 67.7
Prupe.1G228700 Prunus persica HOM05D005952 ORTHO05D007262 3.9e-95 352.8 268 67.2
Aqoxy5G03416 Aquilegia oxysepala HOM05D005952 ORTHO05D007262 5.0e-95 352.4 278 65.8
TWI75G1563 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 1.5e-94 350.9 270 65.6
Peaxi162Scf00518g00512 Petunia axillaris HOM05D005952 ORTHO05D007262 4.3e-94 349.4 267 65.9
Nn3g16502 Nelumbo nucifera HOM05D005952 ORTHO05D007262 9.5e-94 348.2 272 65.4
Pp3c10_15930 Physcomitrium patens HOM05D005952 ORTHO05D007262 9.5e-94 348.2 418 51.4
Pp3c10_15937 Physcomitrium patens HOM05D005952 ORTHO05D007262 9.5e-94 348.2 418 51.4
Psat5g094800 Pisum sativum HOM05D005952 ORTHO05D007262 1.6e-93 347.4 268 66.8
CiPaw.06G101100 Carya illinoinensis HOM05D005952 ORTHO05D007262 2.1e-93 347.1 268 66.0
PGR102G2583 Punica granatum HOM05D005952 ORTHO05D007262 2.1e-93 347.1 266 66.2
Manes.13G018200 Manihot esculenta HOM05D005952 ORTHO05D007262 4.7e-93 345.9 269 65.4
Lj1g0012703 Lotus japonicus HOM05D005952 ORTHO05D007262 6.2e-93 345.5 268 65.3
TAR622G0739 Trochodendron aralioides HOM05D005952 ORTHO05D007262 6.2e-93 345.5 270 65.6
Gohir.A03G127000 Gossypium hirsutum HOM05D005952 ORTHO05D007262 1.1e-92 344.7 268 65.3
Cfa009332 Carpinus fangiana HOM05D005952 ORTHO05D007262 1.8e-92 344.0 264 67.0
Gohir.D02G150400 Gossypium hirsutum HOM05D005952 ORTHO05D007262 4.0e-92 342.8 268 64.6
GSVIVG01010442001 Vitis vinifera HOM05D005952 ORTHO05D007262 5.2e-92 342.4 263 66.2
MD16G1117500 Malus domestica HOM05D005952 ORTHO05D007262 6.8e-92 342.0 271 64.9
Solyc12g035650.2 Solanum lycopersicum HOM05D005952 ORTHO05D007262 6.8e-92 342.0 266 64.7
Sopen12g015910 Solanum pennellii HOM05D005952 ORTHO05D007262 6.8e-92 342.0 266 64.7
Duzib251G0036 Durio zibethinus HOM05D005952 ORTHO05D007262 8.9e-92 341.7 267 65.5
Eucgr.B03481 Eucalyptus grandis HOM05D005952 ORTHO05D007262 8.9e-92 341.7 270 64.8
HanXRQChr08g0207671 Helianthus annuus HOM05D005952 ORTHO05D007262 8.9e-92 341.7 267 64.0
QL03p053757 Quercus lobata HOM05D005952 ORTHO05D007262 1.2e-91 341.3 268 64.9
CDE02G4251 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 2.0e-91 340.5 267 65.2
ClCG11G013770 Citrullus lanatus HOM05D005952 ORTHO05D007262 2.6e-91 340.1 271 64.6
Cc00_g13550 Coffea canephora HOM05D005952 ORTHO05D007262 2.6e-91 340.1 267 64.4
FAN24G3446 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.6e-91 340.1 268 65.3
RcHm_v2.0_Chr4g0430621 Rosa chinensis HOM05D005952 ORTHO05D007262 2.6e-91 340.1 268 65.3
TWI36G0663 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 3.4e-91 339.7 268 64.6
FAN07G2604 Fragaria x ananassa HOM05D005952 ORTHO05D007262 4.4e-91 339.3 268 65.3
Glyma.18G008100 Glycine max HOM05D005952 ORTHO05D007262 5.8e-91 339.0 268 64.6
Medtr3g085590 Medicago truncatula HOM05D005952 ORTHO05D007262 5.8e-91 339.0 264 65.9
Actinidia20698 Actinidia chinensis HOM05D005952 ORTHO05D007262 7.5e-91 338.6 271 62.4
Gorai.005G168700 Gossypium raimondii HOM05D005952 ORTHO05D007262 7.5e-91 338.6 268 64.2
MD13G1116800 Malus domestica HOM05D005952 ORTHO05D007262 7.5e-91 338.6 265 65.7
MELO3C011875.2 Cucumis melo HOM05D005952 ORTHO05D007262 1.7e-90 337.4 271 63.8
Dinv14825 Davidia involucrata HOM05D005952 ORTHO05D007262 1.7e-90 337.4 265 63.8
CsaV3_5G030360 Cucumis sativus L. HOM05D005952 ORTHO05D007262 2.9e-90 336.7 271 63.5
FAN07G2304 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.9e-90 336.7 268 65.3
VMungo1383G3287 Vigna mungo HOM05D005952 ORTHO05D007262 2.9e-90 336.7 264 64.0
CSS0022532 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 3.7e-90 336.3 260 65.4
CSS0029993 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 3.7e-90 336.3 260 65.4
CANSAT01G2967 Cannabis sativa HOM05D005952 ORTHO05D007262 4.9e-90 335.9 269 63.9
Nitab4.5_0000492g0130 Nicotiana tabacum HOM05D005952 ORTHO05D007262 4.9e-90 335.9 267 63.7
Potri.010G059100 Populus trichocarpa HOM05D005952 ORTHO05D007262 4.9e-90 335.9 263 65.0
arahy.Tifrunner.gnm1.ann1.19W7I6 Arachis hypogaea HOM05D005952 ORTHO05D007262 6.4e-90 335.5 264 66.3
Ciclev10031923m.g Citrus clementina HOM05D005952 ORTHO05D007262 1.1e-89 334.7 271 62.7
Lsat_1_v5_gn_8_149221 Lactuca sativa HOM05D005952 ORTHO05D007262 1.1e-89 334.7 267 63.3
Phvul.001G260500 Phaseolus vulgaris HOM05D005952 ORTHO05D007262 1.4e-89 334.3 264 63.6
CAN.G34.9 Capsicum annuum HOM05D005952 ORTHO05D007262 3.2e-89 333.2 266 63.9
AUR62024128 Chenopodium quinoa HOM05D005952 ORTHO05D007262 3.2e-89 333.2 270 64.4
FvH4_4g23970 Fragaria vesca HOM05D005952 ORTHO05D007262 3.2e-89 333.2 269 65.1
Glyma.11G249200 Glycine max HOM05D005952 ORTHO05D007262 3.2e-89 333.2 265 64.2
Ah.02g130720 Amaranthus hybridus HOM05D005952 ORTHO05D007262 4.1e-89 332.8 270 63.0
Haze_12392 Corylus avellana HOM05D005952 ORTHO05D007262 4.1e-89 332.8 305 58.7
EL10Ac6g13481 Beta vulgaris HOM05D005952 ORTHO05D007262 5.4e-89 332.4 270 63.3
THA.LOC104825515 Tarenaya hassleriana HOM05D005952 ORTHO05D007262 7.1e-89 332.0 269 63.6
Hund06080 Selenicereus undatus HOM05D005952 ORTHO05D007262 9.2e-89 331.6 270 62.6
Thecc.02G212400 Theobroma cacao HOM05D005952 ORTHO05D007262 1.2e-88 331.3 271 62.7
Atru.chr11.2304 Acer truncatum HOM05D005952 ORTHO05D007262 1.6e-88 330.9 271 62.7
Sabra10G0046500 Salix brachista HOM05D005952 ORTHO05D007262 1.6e-88 330.9 263 64.3
Carub.0001s2576 Capsella rubella HOM05D005952 ORTHO05D007262 2.1e-88 330.5 269 61.7
MSTRG.7992 Avicennia marina HOM05D005952 ORTHO05D007262 2.7e-88 330.1 265 62.6
Cpa.g.sc43.12 Carica papaya HOM05D005952 ORTHO05D007262 6.0e-88 328.9 291 59.8
COL.COLO4_20379 Corchorus olitorius HOM05D005952 ORTHO05D007262 7.8e-88 328.6 296 58.8
AL1G40610 Arabidopsis lyrata HOM05D005952 ORTHO05D007262 1.0e-87 328.2 270 61.1
BcaC01g01637 Brassica carinata HOM05D005952 ORTHO05D007262 1.0e-87 328.2 269 62.1
A08p26510 Brassica napus HOM05D005952 ORTHO05D007262 1.0e-87 328.2 269 62.1
BolC3t19647H Brassica oleracea HOM05D005952 ORTHO05D007262 1.0e-87 328.2 269 62.1
BraA08t34603Z Brassica rapa HOM05D005952 ORTHO05D007262 1.0e-87 328.2 269 62.1
ECA233G5976 Erigeron canadensis HOM05D005952 ORTHO05D007262 1.0e-87 328.2 266 62.4
Oeu036880.1 Olea europaea HOM05D005952 ORTHO05D007262 1.0e-87 328.2 295 59.3
AT1G24310 Arabidopsis thaliana HOM05D005952 ORTHO05D007262 1.3e-87 327.8 266 61.7
BcaB03g12064 Brassica carinata HOM05D005952 ORTHO05D007262 1.3e-87 327.8 269 61.7
CARHR026780 Cardamine hirsuta HOM05D005952 ORTHO05D007262 2.3e-87 327.0 267 61.4
Lalb_Chr12g0206321 Lupinus albus HOM05D005952 ORTHO05D007262 2.3e-87 327.0 264 63.6
C03p73530 Brassica napus HOM05D005952 ORTHO05D007262 3.0e-87 326.6 269 61.7
Lj3A1066G68 Lonicera japonica HOM05D005952 ORTHO05D007262 6.6e-87 325.5 268 61.9
Sp1g23460 Schrenkiella parvula HOM05D005952 ORTHO05D007262 8.6e-87 325.1 269 61.0
Sc04g0004640 Simmondsia chinensis HOM05D005952 ORTHO05D007262 1.1e-86 324.7 264 62.1
Sed0028059 Sechium edule HOM05D005952 ORTHO05D007262 1.5e-86 324.3 269 61.0
SGA_v2.0_scaffold9G04762 Striga asiatica HOM05D005952 ORTHO05D007262 2.5e-86 323.6 268 61.6
FAN03G3372 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.1e-85 320.5 278 61.9
Aa31LG7G9800 Aethionema arabicum HOM05D005952 ORTHO05D007262 1.2e-83 314.7 274 59.5
Ca_16474_v3 Cicer arietinum L. HOM05D005952 ORTHO05D007262 1.2e-83 314.7 245 64.9
Nitab4.5_0002026g0100 Nicotiana tabacum HOM05D005952 ORTHO05D007262 1.2e-83 314.7 267 60.7
Potri.008G176100 Populus trichocarpa HOM05D005952 ORTHO05D007262 1.2e-83 314.7 267 62.2
CBR_g21943 Chara braunii HOM05D005952 ORTHO05D007262 5.8e-83 312.4 268 59.3
Migut.K00712 Erythranthe guttata HOM05D005952 ORTHO05D007262 2.9e-82 310.1 268 59.7
Os07g0295400 Oryza sativa ssp. japonica HOM05D005952 ORTHO05D007262 2.9e-82 310.1 269 56.9
AagrBONN_evm.TU.Sc2ySwM_362.1552 Anthoceros agrestis HOM05D005952 ORTHO05D007262 1.9e-81 307.4 261 59.0
FAN27G1928 Fragaria x ananassa HOM05D005952 ORTHO05D007262 5.4e-81 305.8 245 63.7
CBR_g39502 Chara braunii HOM05D005952 ORTHO05D007262 9.2e-81 305.1 391 48.1
HPP92_023193 Vanilla planifolia HOM05D005952 ORTHO05D007262 1.2e-80 304.7 267 56.9
FAN21G1414 Fragaria x ananassa HOM05D005952 ORTHO05D007262 7.8e-80 302.0 245 63.7
Rhsim12G0102200 Rhododendron simsii HOM05D005952 ORTHO05D007262 7.8e-80 302.0 353 49.6
Sed0012291 Sechium edule HOM05D005952 ORTHO05D007262 1.7e-79 300.8 270 58.9
PSO063G3255 Papaver somniferum HOM05D005952 ORTHO05D007262 2.3e-79 300.4 266 58.3
PSO782G2816 Papaver somniferum HOM05D005952 ORTHO05D007262 2.3e-79 300.4 266 58.3
DCAR_031192 Daucus carota HOM05D005952 ORTHO05D007262 4.3e-78 296.2 239 60.7
Zm00001eb305390 Zea mays HOM05D005952 ORTHO05D007262 2.1e-77 293.9 269 55.4
AUR62005599 Chenopodium quinoa HOM05D005952 ORTHO05D007262 3.6e-77 293.1 233 66.1
arahy.Tifrunner.gnm1.ann1.2251QZ Arachis hypogaea HOM05D005952 ORTHO05D007262 5.6e-70 269.2 264 56.4
SHI17953 Sapria himalayana HOM05D005952 ORTHO05D007262 6.2e-69 265.8 231 58.0
FAN04G2616 Fragaria x ananassa HOM05D005952 ORTHO05D007262 8.1e-69 265.4 227 61.2
CDE06G2258 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 5.4e-65 252.7 267 52.8
Thhalv10008300m.g Eutrema salsugineum HOM05D005952 ORTHO05D007262 4.3e-62 243.0 184 64.1
SalBow2G2019 Salvia bowleyana HOM05D005952 ORTHO05D007262 7.4e-62 242.3 266 50.4
FAN04G0683 Fragaria x ananassa HOM05D005952 ORTHO05D007262 8.4e-58 228.8 150 75.3
Pp3c14_14130 Physcomitrium patens HOM05D005952 ORTHO05D007262 9.3e-57 225.3 259 52.1
Actinidia09658 Actinidia chinensis HOM05D005952 ORTHO05D007262 3.7e-53 213.4 153 68.0
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 3.4e-51 206.8 166 62.0
Hma1.2p1_0668F.1_g200020 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 7.1e-49 199.1 169 59.8
TWI36G1659 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 2.8e-45 187.2 287 41.8
FAN23G0106 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.8e-37 160.6 99 79.8
Hma1.2p1_0668F.1_g200040 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 4.5e-35 153.3 99 72.7
SEGI_23869 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 7.0e-28 129.4 101 62.4
HanXRQChr03g0071651 Helianthus annuus HOM05D005952 ORTHO05D007262 3.0e-23 114.0 76 69.7
SEGI_30692 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 2.6e-22 110.9 128 48.4
MCO04G375 Micromonas commoda HOM05D005952 ORTHO05D007262 1.2e-16 92.0 348 25.6
Cre12.g542950 Chlamydomonas reinhardtii HOM05D005952 ORTHO05D007262 1.6e-16 91.7 250 29.6
Oeu029609.1 Olea europaea HOM05D005952 ORTHO05D007262 2.6e-14 84.3 62 62.9
FAN04G0535 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.7e-13 81.6 111 44.1
Migut.K01177 Erythranthe guttata HOM05D005952 ORTHO05D007262 1.2e-06 58.9 97 40.2


User provided reference genes

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