Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_29039 Sequoiadendron giganteum HOM05D001891 ORTHO05D005832 9.3e-80 300.1 142 100.0
CSS0020073 Camellia sinensis var. sinensis HOM05D001891 ORTHO05D005832 2.7e-23 112.5 133 42.9
MBI18_g17390_MAGBIO Magnolia biondii HOM05D001891 ORTHO05D005832 4.7e-23 111.7 134 44.8
Nitab4.5_0001176g0150 Nicotiana tabacum HOM05D001891 ORTHO05D005832 1.0e-22 110.5 106 50.0
GSVIVG01030624001 Vitis vinifera HOM05D001891 ORTHO05D005832 5.2e-22 108.2 106 50.0
CAN.G921.8 Capsicum annuum HOM05D001891 ORTHO05D005832 6.8e-22 107.8 113 46.0
MBI18_g07895_MAGBIO Magnolia biondii HOM05D001891 ORTHO05D005832 6.8e-22 107.8 133 44.4
ECA238G0562 Erigeron canadensis HOM05D001891 ORTHO05D005832 8.8e-22 107.5 113 46.9
ATR0804G013 Amborella trichopoda HOM05D001891 ORTHO05D005832 1.2e-21 107.1 136 42.6
MBI18_g19140_MAGBIO Magnolia biondii HOM05D001891 ORTHO05D005832 1.2e-21 107.1 133 43.6
arahy.Tifrunner.gnm1.ann1.IG5XIH Arachis hypogaea HOM05D001891 ORTHO05D005832 7.5e-21 104.4 129 41.9
Thecc.02G162300 Theobroma cacao HOM05D001891 ORTHO05D005832 7.5e-21 104.4 121 43.0
arahy.Tifrunner.gnm1.ann1.XAPR04 Arachis hypogaea HOM05D001891 ORTHO05D005832 9.8e-21 104.0 129 41.9
SGA_v2.0_scaffold70G23419 Striga asiatica HOM05D001891 ORTHO05D005832 1.7e-20 103.2 109 45.9
Aqoxy4G02100 Aquilegia oxysepala HOM05D001891 ORTHO05D005832 2.2e-20 102.8 120 41.7
Glyma.12G195700 Glycine max HOM05D001891 ORTHO05D005832 2.2e-20 102.8 122 45.9
Solyc07g052570.4 Solanum lycopersicum HOM05D001891 ORTHO05D005832 3.7e-20 102.1 127 41.7
Lalb_Chr24g0393071 Lupinus albus HOM05D001891 ORTHO05D005832 6.3e-20 101.3 116 43.1
CANSAT64G2761 Cannabis sativa HOM05D001891 ORTHO05D005832 8.3e-20 100.9 123 46.3
Dinv39687 Davidia involucrata HOM05D001891 ORTHO05D005832 1.1e-19 100.5 133 40.6
Oeu041941.2 Olea europaea HOM05D001891 ORTHO05D005832 1.4e-19 100.1 106 44.3
SalBow7G4184 Salvia bowleyana HOM05D001891 ORTHO05D005832 1.4e-19 100.1 106 47.2
unitig_26.g9659 Utricularia gibba HOM05D001891 ORTHO05D005832 1.4e-19 100.1 106 47.2
Duzib052G0092 Durio zibethinus HOM05D001891 ORTHO05D005832 2.4e-19 99.4 125 42.4
CiPaw.03G162900 Carya illinoinensis HOM05D001891 ORTHO05D005832 3.1e-19 99.0 133 42.9
Migut.M00395 Erythranthe guttata HOM05D001891 ORTHO05D005832 3.1e-19 99.0 108 46.3
Ciclev10015025m.g Citrus clementina HOM05D001891 ORTHO05D005832 4.1e-19 98.6 133 40.6
Haze_12897 Corylus avellana HOM05D001891 ORTHO05D005832 4.1e-19 98.6 133 41.4
PGR142G2396 Punica granatum HOM05D001891 ORTHO05D005832 9.1e-19 97.4 134 39.6
TAR624G1196 Trochodendron aralioides HOM05D001891 ORTHO05D005832 9.1e-19 97.4 132 40.2
vmacro12227 Vaccinium macrocarpon HOM05D001891 ORTHO05D005832 9.1e-19 97.4 133 37.6
Actinidia12502 Actinidia chinensis HOM05D001891 ORTHO05D005832 1.2e-18 97.1 130 38.5
QL08p033823 Quercus lobata HOM05D001891 ORTHO05D005832 1.2e-18 97.1 133 42.9
Cfa014439 Carpinus fangiana HOM05D001891 ORTHO05D005832 2.0e-18 96.3 133 40.6
COL.COLO4_12984 Corchorus olitorius HOM05D001891 ORTHO05D005832 2.0e-18 96.3 121 39.7
Glyma.13G306800 Glycine max HOM05D001891 ORTHO05D005832 2.0e-18 96.3 122 41.8
AUR62040522 Chenopodium quinoa HOM05D001891 ORTHO05D005832 2.7e-18 95.9 120 42.5
MD09G1105100 Malus domestica HOM05D001891 ORTHO05D005832 2.7e-18 95.9 115 42.6
Sc12g0002380 Simmondsia chinensis HOM05D001891 ORTHO05D005832 2.7e-18 95.9 119 46.2
Ah.15g093450 Amaranthus hybridus HOM05D001891 ORTHO05D005832 3.5e-18 95.5 119 41.2
Rhsim06G0158100 Rhododendron simsii HOM05D001891 ORTHO05D005832 3.5e-18 95.5 133 38.3
MBI18_g23508_MAGBIO Magnolia biondii HOM05D001891 ORTHO05D005832 4.5e-18 95.1 133 42.1
TPR.G4158 Trifolium pratense HOM05D001891 ORTHO05D005832 4.5e-18 95.1 125 42.4
Atru.chr6.3148 Acer truncatum HOM05D001891 ORTHO05D005832 5.9e-18 94.7 134 39.6
Prupe.3G220400 Prunus persica HOM05D001891 ORTHO05D005832 5.9e-18 94.7 115 42.6
Aa31LG8G8410 Aethionema arabicum HOM05D001891 ORTHO05D005832 7.7e-18 94.4 114 41.2
Lj3g0012140 Lotus japonicus HOM05D001891 ORTHO05D005832 7.7e-18 94.4 132 43.2
TWI18G0733 Tripterygium wilfordii HOM05D001891 ORTHO05D005832 7.7e-18 94.4 133 39.1
Eucgr.K00860 Eucalyptus grandis HOM05D001891 ORTHO05D005832 1.3e-17 93.6 139 34.5
THA.LOC104821752 Tarenaya hassleriana HOM05D001891 ORTHO05D005832 1.3e-17 93.6 117 40.2
Hund01107 Selenicereus undatus HOM05D001891 ORTHO05D005832 1.7e-17 93.2 118 40.7
CDE01G0775 Ceratophyllum demersum HOM05D001891 ORTHO05D005832 2.3e-17 92.8 134 40.3
Potri.017G038700 Populus trichocarpa HOM05D001891 ORTHO05D005832 2.3e-17 92.8 106 40.6
FAN02G0497 Fragaria x ananassa HOM05D001891 ORTHO05D005832 2.9e-17 92.4 113 40.7
Psat5g265280 Pisum sativum HOM05D001891 ORTHO05D005832 2.9e-17 92.4 125 42.4
Sopen07g026180 Solanum pennellii HOM05D001891 ORTHO05D005832 2.9e-17 92.4 144 36.1
EL10Ac7g17313 Beta vulgaris HOM05D001891 ORTHO05D005832 3.8e-17 92.0 120 40.0
CARHR097810 Cardamine hirsuta HOM05D001891 ORTHO05D005832 5.0e-17 91.7 114 39.5
Os04g0629100 Oryza sativa ssp. japonica HOM05D001891 ORTHO05D005832 6.5e-17 91.3 120 41.7
C05p41560 Brassica napus HOM05D001891 ORTHO05D005832 8.6e-17 90.9 106 39.6
BolC5t32893H Brassica oleracea HOM05D001891 ORTHO05D005832 8.6e-17 90.9 106 39.6
Thhalv10020639m.g Eutrema salsugineum HOM05D001891 ORTHO05D005832 8.6e-17 90.9 117 39.3
AL3G35970 Arabidopsis lyrata HOM05D001891 ORTHO05D005832 1.1e-16 90.5 117 37.6
AL3G35980 Arabidopsis lyrata HOM05D001891 ORTHO05D005832 1.1e-16 90.5 117 37.6
Nn1g03668 Nelumbo nucifera HOM05D001891 ORTHO05D005832 1.1e-16 90.5 130 38.5
PSO541G2722 Papaver somniferum HOM05D001891 ORTHO05D005832 1.1e-16 90.5 138 41.3
FAN09G1075 Fragaria x ananassa HOM05D001891 ORTHO05D005832 1.5e-16 90.1 113 40.7
Eucgr.K00839 Eucalyptus grandis HOM05D001891 ORTHO05D005832 1.9e-16 89.7 133 37.6
RcHm_v2.0_Chr2g0160071 Rosa chinensis HOM05D001891 ORTHO05D005832 1.9e-16 89.7 118 39.8
A05p26920 Brassica napus HOM05D001891 ORTHO05D005832 2.5e-16 89.4 106 41.5
BraA05t21572Z Brassica rapa HOM05D001891 ORTHO05D005832 2.5e-16 89.4 106 41.5
MELO3C019236.2 Cucumis melo HOM05D001891 ORTHO05D005832 2.5e-16 89.4 131 38.2
CsaV3_2G035180 Cucumis sativus L. HOM05D001891 ORTHO05D005832 2.5e-16 89.4 131 38.2
Gohir.D01G014600 Gossypium hirsutum HOM05D001891 ORTHO05D005832 2.5e-16 89.4 123 38.2
Gorai.002G016300 Gossypium raimondii HOM05D001891 ORTHO05D005832 2.5e-16 89.4 123 38.2
Medtr2g088820 Medicago truncatula HOM05D001891 ORTHO05D005832 2.5e-16 89.4 127 39.4
Carub.0003s2190 Capsella rubella HOM05D001891 ORTHO05D005832 3.3e-16 89.0 117 37.6
Gohir.A01G013300 Gossypium hirsutum HOM05D001891 ORTHO05D005832 3.3e-16 89.0 123 38.2
Mapoly0057s0093 Marchantia polymorpha HOM05D001891 ORTHO05D005832 3.3e-16 89.0 127 40.2
Sp3g19820 Schrenkiella parvula HOM05D001891 ORTHO05D005832 3.3e-16 89.0 117 36.8
Sabra17G0025700 Salix brachista HOM05D001891 ORTHO05D005832 4.2e-16 88.6 106 39.6
ClCG02G008450 Citrullus lanatus HOM05D001891 ORTHO05D005832 5.5e-16 88.2 131 36.6
Phvul.005G113700 Phaseolus vulgaris HOM05D001891 ORTHO05D005832 5.5e-16 88.2 122 41.8
AT3G21820 Arabidopsis thaliana HOM05D001891 ORTHO05D005832 7.2e-16 87.8 115 37.4
BcaC05g28122 Brassica carinata HOM05D001891 ORTHO05D005832 9.5e-16 87.4 106 39.6
VMungo1080G1248 Vigna mungo HOM05D001891 ORTHO05D005832 9.5e-16 87.4 122 40.2
FAN05G1073 Fragaria x ananassa HOM05D001891 ORTHO05D005832 2.1e-15 86.3 113 39.8
HanXRQChr10g0297501 Helianthus annuus HOM05D001891 ORTHO05D005832 1.0e-14 84.0 106 40.6
arahy.Tifrunner.gnm1.ann1.F9GSXH Arachis hypogaea HOM05D003886 ORTHO05D019782 1.8e-14 83.2 105 40.0
BcaB06g26287 Brassica carinata HOM05D001891 ORTHO05D005832 1.8e-14 83.2 116 37.1
Manes.13G073100 Manihot esculenta HOM05D001891 ORTHO05D005832 1.8e-14 83.2 131 35.9
Zm00001eb069580 Zea mays HOM05D001891 ORTHO05D005832 1.8e-14 83.2 153 35.9
Eucgr.K00819 Eucalyptus grandis HOM05D001891 ORTHO05D005832 2.3e-14 82.8 138 32.6
Eucgr.K00822 Eucalyptus grandis HOM05D001891 ORTHO05D005832 3.0e-14 82.4 133 35.3
ATR0008G001 Amborella trichopoda HOM05D001891 ORTHO05D005832 6.8e-14 81.3 123 35.8
Peaxi162Scf00007g01229 Petunia axillaris HOM05D001891 ORTHO05D005832 1.2e-13 80.5 112 37.5
Cc05_g05050 Coffea canephora HOM05D001891 ORTHO05D005832 1.3e-12 77.0 134 35.8
Pp3c13_21910 Physcomitrium patens HOM05D001891 ORTHO05D005832 2.8e-12 75.9 135 32.6
DCAR_012957 Daucus carota HOM05D001891 ORTHO05D005832 3.7e-12 75.5 134 35.1
MCO06G294 Micromonas commoda HOM05D001891 ORTHO05D005832 1.8e-11 73.2 105 39.0
Eucgr.K00818 Eucalyptus grandis HOM05D001891 ORTHO05D005832 5.4e-11 71.6 121 30.6
Cpa.g.sc8.235 Carica papaya HOM05D001891 ORTHO05D005832 7.0e-11 71.2 101 37.6
MBI18_g41692_MAGBIO Magnolia biondii HOM05D001891 ORTHO05D005832 7.0e-11 71.2 59 59.3
FAN14G5299 Fragaria x ananassa HOM05D001891 ORTHO05D005832 1.0e-09 67.4 95 35.8
SMO167G0005 Selaginella moellendorffii HOM05D001891 ORTHO05D005832 2.3e-09 66.2 107 40.2
Sed0014701 Sechium edule HOM05D001891 ORTHO05D005832 6.6e-09 64.7 127 31.5
SMO347G0022 Selaginella moellendorffii HOM05D001891 ORTHO05D005832 4.3e-08 62.0 106 38.7
arahy.Tifrunner.gnm1.ann1.6T7UPN Arachis hypogaea HOM05D003636 ORTHO05D005832 2.8e-07 59.3 65 40.0


User provided reference genes

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