Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_29020 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 0.0e+00 1266.5 669 100.0
SEGI_24649 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 2.2e-301 1038.5 550 100.0
SEGI_09123 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 6.2e-259 897.5 492 96.7
Mapoly0033s0024 Marchantia polymorpha HOM05D002270 ORTHO05D002866 4.9e-139 499.2 662 45.6
Pp3c8_22130 Physcomitrium patens HOM05D002270 ORTHO05D002866 2.0e-132 477.2 634 45.3
MBI17_g19031_MAGBIO Magnolia biondii HOM05D002270 ORTHO05D002866 1.3e-128 464.5 685 42.9
Nn8g38745 Nelumbo nucifera HOM05D002270 ORTHO05D002866 1.3e-128 464.5 684 43.1
Hma1.2p1_0291F.1_g115290 Hydrangea macrophylla HOM05D002270 ORTHO05D002866 7.4e-127 458.8 558 48.6
CiPaw.01G221300 Carya illinoinensis HOM05D002270 ORTHO05D002866 1.3e-126 458.0 684 42.0
AagrBONN_evm.TU.Sc2ySwM_344.4174 Anthoceros agrestis HOM05D002270 ORTHO05D002866 2.1e-126 457.2 693 42.1
GSVIVG01016794001 Vitis vinifera HOM05D002270 ORTHO05D002866 4.8e-126 456.1 700 41.4
Potri.017G039100 Populus trichocarpa HOM05D002270 ORTHO05D002866 2.4e-125 453.8 663 44.0
Sed0013702 Sechium edule HOM05D002270 ORTHO05D002866 2.4e-125 453.8 511 49.5
CsaV3_7G034610 Cucumis sativus L. HOM05D002270 ORTHO05D002866 1.2e-124 451.4 687 42.2
Actinidia32171 Actinidia chinensis HOM05D002270 ORTHO05D002866 2.6e-124 450.3 684 43.0
Lj5C40G12 Lonicera japonica HOM05D002270 ORTHO05D002866 5.8e-124 449.1 683 43.2
Dinv37885 Davidia involucrata HOM05D002270 ORTHO05D002866 7.6e-124 448.7 687 43.5
MELO3C024369.2 Cucumis melo HOM05D002270 ORTHO05D002866 9.9e-124 448.4 683 42.5
ClCG09G000860 Citrullus lanatus HOM05D002270 ORTHO05D002866 4.9e-123 446.0 684 41.4
QL05p009063 Quercus lobata HOM05D002270 ORTHO05D002866 6.4e-123 445.7 643 42.6
Prupe.3G044200 Prunus persica HOM05D002270 ORTHO05D002866 4.2e-122 443.0 674 42.7
Cfa003549 Carpinus fangiana HOM05D002270 ORTHO05D002866 5.5e-122 442.6 690 42.8
Cc04_g01520 Coffea canephora HOM05D002270 ORTHO05D002866 5.5e-122 442.6 670 42.7
ATR0736G011 Amborella trichopoda HOM05D002270 ORTHO05D002866 1.2e-121 441.4 706 42.1
Sopen04g028450 Solanum pennellii HOM05D002270 ORTHO05D002866 7.9e-121 438.7 676 42.6
DCAR_014031 Daucus carota HOM05D002270 ORTHO05D002866 1.3e-120 438.0 525 47.4
Sabra17G0026200 Salix brachista HOM05D002270 ORTHO05D002866 1.8e-120 437.6 695 42.2
Oeu039944.3 Olea europaea HOM05D002270 ORTHO05D002866 3.9e-120 436.4 674 42.3
RcHm_v2.0_Chr2g0144641 Rosa chinensis HOM05D002270 ORTHO05D002866 8.7e-120 435.3 640 41.7
vmacro22216 Vaccinium macrocarpon HOM05D002270 ORTHO05D002866 1.5e-119 434.5 688 41.9
Atru.chr1.3813 Acer truncatum HOM05D002270 ORTHO05D002866 1.9e-119 434.1 666 42.3
Aqoxy7G03985 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 3.3e-119 433.3 716 40.2
Manes.04G142500 Manihot esculenta HOM05D002270 ORTHO05D002866 3.3e-119 433.3 660 42.7
Haze_16005 Corylus avellana HOM05D002270 ORTHO05D002866 5.6e-119 432.6 690 41.6
CSS0023775 Camellia sinensis var. sinensis HOM05D002270 ORTHO05D002866 9.6e-119 431.8 689 41.5
Sc15g0000370 Simmondsia chinensis HOM05D002270 ORTHO05D002866 9.6e-119 431.8 543 45.9
Solyc04g072260.3 Solanum lycopersicum HOM05D002270 ORTHO05D002866 9.6e-119 431.8 673 42.6
CAN.G1010.9 Capsicum annuum HOM05D002270 ORTHO05D002866 1.3e-118 431.4 681 42.3
Nitab4.5_0003025g0020 Nicotiana tabacum HOM05D002270 ORTHO05D002866 2.1e-118 430.6 689 42.2
Os10g0456900 Oryza sativa ssp. japonica HOM05D002270 ORTHO05D002866 3.7e-118 429.9 545 46.8
FAN02G3927 Fragaria x ananassa HOM05D002270 ORTHO05D002866 1.4e-117 427.9 536 46.8
FAN05G0510 Fragaria x ananassa HOM05D002270 ORTHO05D002866 1.8e-117 427.6 581 44.1
Gorai.011G062600 Gossypium raimondii HOM05D002270 ORTHO05D002866 1.8e-117 427.6 635 41.9
Nitab4.5_0000433g0200 Nicotiana tabacum HOM05D002270 ORTHO05D002866 3.1e-117 426.8 683 42.3
Gohir.D10G058500 Gossypium hirsutum HOM05D002270 ORTHO05D002866 4.0e-117 426.4 635 41.9
Thecc.06G117100 Theobroma cacao HOM05D002270 ORTHO05D002866 5.3e-117 426.0 669 42.0
HanXRQChr09g0276661 Helianthus annuus HOM05D002270 ORTHO05D002866 6.9e-117 425.6 576 45.1
HPP92_008118 Vanilla planifolia HOM05D002270 ORTHO05D002866 6.9e-117 425.6 652 42.3
Rhsim07G0217300 Rhododendron simsii HOM05D002270 ORTHO05D002866 9.0e-117 425.2 680 42.4
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 1.2e-116 424.9 683 41.0
MD05G1009600 Malus domestica HOM05D002270 ORTHO05D002866 1.2e-116 424.9 525 47.2
MSTRG.10966 Avicennia marina HOM05D002270 ORTHO05D002866 1.5e-116 424.5 677 40.8
Ciclev10024676m.g Citrus clementina HOM05D002270 ORTHO05D002866 2.0e-116 424.1 700 41.1
Lsat_1_v5_gn_4_95020 Lactuca sativa HOM05D002270 ORTHO05D002866 3.4e-116 423.3 581 44.6
FvH4_6g34300 Fragaria vesca HOM05D002270 ORTHO05D002866 7.6e-116 422.2 654 41.0
FAN14G4121 Fragaria x ananassa HOM05D002270 ORTHO05D002866 7.6e-116 422.2 654 41.0
ECA232G3855 Erigeron canadensis HOM05D002270 ORTHO05D002866 1.7e-115 421.0 697 41.5
SalBow6G4013 Salvia bowleyana HOM05D002270 ORTHO05D002866 3.8e-115 419.9 666 41.1
CDE12G0817 Ceratophyllum demersum HOM05D002270 ORTHO05D002866 4.2e-114 416.4 413 54.7
Peaxi162Scf00226g00823 Petunia axillaris HOM05D002270 ORTHO05D002866 7.1e-114 415.6 716 40.8
Zm00001eb290580 Zea mays HOM05D002270 ORTHO05D002866 7.1e-114 415.6 691 40.2
Duzib235G1111 Durio zibethinus HOM05D002270 ORTHO05D002866 9.3e-114 415.2 644 41.6
Lalb_Chr20g0113911 Lupinus albus HOM05D002270 ORTHO05D002866 2.1e-113 414.1 661 40.4
Gohir.A10G056600 Gossypium hirsutum HOM05D002270 ORTHO05D002866 1.3e-112 411.4 690 38.6
SGA_v2.0_scaffold71G23844 Striga asiatica HOM05D002270 ORTHO05D002866 3.0e-112 410.2 646 41.6
CBR_g741 Chara braunii HOM05D002270 ORTHO05D002866 6.7e-112 409.1 537 45.1
Hund05750 Selenicereus undatus HOM05D002270 ORTHO05D002866 6.7e-112 409.1 643 40.7
VMungo0464G0658 Vigna mungo HOM05D002270 ORTHO05D002866 1.5e-111 407.9 682 39.6
Psat4g180280 Pisum sativum HOM05D002270 ORTHO05D002866 7.4e-111 405.6 685 39.4
PSO423G0075 Papaver somniferum HOM05D002270 ORTHO05D002866 9.7e-111 405.2 689 39.3
CANSAT56G0650 Cannabis sativa HOM05D002270 ORTHO05D002866 3.1e-109 400.2 725 37.7
Eucgr.J02835 Eucalyptus grandis HOM05D002270 ORTHO05D002866 4.1e-109 399.8 283 68.6
Glyma.16G004800 Glycine max HOM05D002270 ORTHO05D002866 6.9e-109 399.1 678 38.3
Lj3g0006373 Lotus japonicus HOM05D002270 ORTHO05D002866 6.9e-109 399.1 539 42.9
PSO144G0138 Papaver somniferum HOM05D002270 ORTHO05D002866 1.2e-108 398.3 689 39.2
arahy.Tifrunner.gnm1.ann1.B3D1QM Arachis hypogaea HOM05D002270 ORTHO05D002866 5.9e-108 396.0 660 38.3
AUR62009863 Chenopodium quinoa HOM05D002270 ORTHO05D002866 7.6e-108 395.6 523 44.7
arahy.Tifrunner.gnm1.ann1.3D1K9T Arachis hypogaea HOM05D002270 ORTHO05D002866 1.0e-107 395.2 665 38.0
Ca_23356_v3 Cicer arietinum L. HOM05D002270 ORTHO05D002866 1.0e-107 395.2 674 40.1
AUR62001507 Chenopodium quinoa HOM05D002270 ORTHO05D002866 1.3e-107 394.8 528 44.7
Glyma.07G035600 Glycine max HOM05D002270 ORTHO05D002866 2.2e-107 394.0 676 37.9
Migut.H01763 Erythranthe guttata HOM05D002270 ORTHO05D002866 3.8e-107 393.3 685 39.9
Phvul.010G134100 Phaseolus vulgaris HOM05D002270 ORTHO05D002866 1.9e-106 391.0 698 39.0
PGR142G3590 Punica granatum HOM05D002270 ORTHO05D002866 1.6e-105 387.9 673 39.7
Sed0006033 Sechium edule HOM05D002270 ORTHO05D002866 2.1e-105 387.5 280 66.8
EL10Ac7g16387 Beta vulgaris HOM05D002270 ORTHO05D002866 3.6e-105 386.7 669 38.9
Medtr8g018890 Medicago truncatula HOM05D002270 ORTHO05D002866 1.0e-104 385.2 678 38.3
COL.COLO4_12564 Corchorus olitorius HOM05D002270 ORTHO05D002866 1.4e-104 384.8 289 65.1
THA.LOC104805560 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 1.1e-103 381.7 682 39.7
BcaNung06980 Brassica carinata HOM05D002270 ORTHO05D002866 2.8e-102 377.1 504 43.5
TWI09G1355 Tripterygium wilfordii HOM05D002270 ORTHO05D002866 3.7e-102 376.7 672 39.0
unitig_22.g5235 Utricularia gibba HOM05D002270 ORTHO05D002866 8.2e-102 375.6 619 40.5
Carub.0002s1342 Capsella rubella HOM05D002270 ORTHO05D002866 3.1e-101 373.6 652 38.7
QL03p018747 Quercus lobata HOM05D002270 ORTHO05D002866 4.1e-101 373.2 663 37.9
BraA02t06460Z Brassica rapa HOM05D002270 ORTHO05D002866 1.2e-100 371.7 624 38.9
A02p14000 Brassica napus HOM05D002270 ORTHO05D002866 1.5e-100 371.3 624 38.9
Sp5g22050 Schrenkiella parvula HOM05D002270 ORTHO05D002866 3.4e-100 370.2 592 38.9
THA.LOC104807245 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 1.0e-99 368.6 670 38.5
Thhalv10017991m.g Eutrema salsugineum HOM05D002270 ORTHO05D002866 1.3e-99 368.2 643 38.4
BolC2t08403H Brassica oleracea HOM05D002270 ORTHO05D002866 1.7e-99 367.9 620 38.4
TAR636G2258 Trochodendron aralioides HOM05D002270 ORTHO05D002866 2.2e-99 367.5 252 69.0
AT1G67120 Arabidopsis thaliana HOM05D002270 ORTHO05D002866 3.8e-99 366.7 684 37.3
Aa31LG2G3520 Aethionema arabicum HOM05D002270 ORTHO05D002866 6.5e-99 365.9 684 38.2
C02p22490 Brassica napus HOM05D002270 ORTHO05D002866 8.5e-99 365.5 637 38.3
AL2G25500 Arabidopsis lyrata HOM05D002270 ORTHO05D002866 5.5e-98 362.8 687 37.0
Carub.0002s1105 Capsella rubella HOM05D002270 ORTHO05D002866 7.2e-98 362.5 640 38.1
Rhsim08G0236800 Rhododendron simsii HOM05D002270 ORTHO05D002866 3.6e-97 360.1 685 38.0
Ah.08g216550 Amaranthus hybridus HOM05D002270 ORTHO05D002866 1.5e-95 354.8 634 37.7
CARHR059570 Cardamine hirsuta HOM05D002270 ORTHO05D002866 2.6e-95 354.0 622 37.0
FAN09G1018 Fragaria x ananassa HOM05D002270 ORTHO05D002866 2.1e-89 334.3 461 45.3
MCO14G006 Micromonas commoda HOM05D002270 ORTHO05D002866 3.2e-82 310.5 282 55.0
Cre03.g161800 Chlamydomonas reinhardtii HOM05D002270 ORTHO05D002866 9.4e-82 308.9 283 58.7
PRCOL_00003697 Prasinoderma coloniale HOM05D002270 ORTHO05D002866 1.7e-75 288.1 276 52.2
VMungo1080G1592 Vigna mungo HOM05D002270 ORTHO05D002866 1.7e-67 261.5 222 59.0
BcaC07g41079 Brassica carinata HOM05D002270 ORTHO05D002866 7.3e-58 229.6 240 50.4
Aqoxy6G02932 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 1.6e-52 211.8 144 67.4
TPR.G51 Trifolium pratense HOM05D002270 ORTHO05D002866 4.3e-50 203.8 149 65.1
BcaB03g13736 Brassica carinata HOM05D002270 ORTHO05D002866 6.6e-43 179.9 168 50.0
SMO141G0258 Selaginella moellendorffii HOM05D002270 ORTHO05D002866 8.3e-38 162.9 93 82.8
SEGI_22737 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 3.6e-33 147.5 76 97.4
SMO141G0084 Selaginella moellendorffii HOM05D002270 ORTHO05D002866 1.9e-29 135.2 81 76.5
ECA067G0003 Erigeron canadensis HOM05D002270 ORTHO05D002866 1.1e-26 125.9 83 72.3
Medtr8g019250 Medicago truncatula HOM05D002270 ORTHO05D002866 1.4e-24 119.0 81 66.7
PGSC0003DMG400044228 Solanum tuberosum HOM05D002270 ORTHO05D002866 6.9e-24 116.7 444 30.6
TPR.G9785 Trifolium pratense HOM05D002270 ORTHO05D002866 8.7e-19 99.8 73 58.9
TPR.G582 Trifolium pratense HOM05D002270 ORTHO05D002866 2.5e-18 98.2 70 62.9
QL05p008973 Quercus lobata HOM05D002270 ORTHO05D001155 4.5e-15 87.4 94 48.9
SMO141G0121 Selaginella moellendorffii HOM05D002270 ORTHO05D002866 1.0e-11 76.3 44 77.3
BolC8t51649H Brassica oleracea HOM05D002270 ORTHO05D002866 7.4e-10 70.1 78 47.4
PSO210G4815 Papaver somniferum HOM05D002270 ORTHO05D002866 9.6e-10 69.7 217 28.6
Aqoxy6G02933 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 9.9e-07 59.7 173 31.8
TAR636G2809 Trochodendron aralioides HOM05D002270 ORTHO05D002866 2.2e-06 58.5 338 25.4
Cre02.g095550 Chlamydomonas reinhardtii HOM05D053512 ORTHO05D012763 6.4e-06 57.0 174 26.4


User provided reference genes

Program Settings