Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28853 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 0.0e+00 1313.1 712 100.0
Mapoly0043s0041 Marchantia polymorpha HOM05D006616 ORTHO05D008435 1.6e-63 248.4 619 38.9
ATR0326G030 Amborella trichopoda HOM05D006616 ORTHO05D008435 1.5e-61 241.9 367 51.0
TAR622G0026 Trochodendron aralioides HOM05D006616 ORTHO05D008435 5.3e-59 233.4 358 49.4
MBI16_g32949_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 2.1e-55 221.5 475 42.1
PSO478G1375 Papaver somniferum HOM05D006616 ORTHO05D008435 9.8e-53 212.6 360 46.9
Actinidia03423 Actinidia chinensis HOM05D006616 ORTHO05D008435 6.3e-52 209.9 373 45.6
Nn3g18184 Nelumbo nucifera HOM05D006616 ORTHO05D008435 6.3e-52 209.9 354 46.6
Pp3c10_1890 Physcomitrium patens HOM05D006616 ORTHO05D008435 1.8e-51 208.4 774 34.4
Pp3c10_1896 Physcomitrium patens HOM05D006616 ORTHO05D008435 1.8e-51 208.4 774 34.4
Hma1.2p1_2178F.1_g316210 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 7.0e-51 206.5 355 47.9
Dinv27270 Davidia involucrata HOM05D006616 ORTHO05D008435 9.1e-51 206.1 447 43.2
Glyma.02G162000 Glycine max HOM05D006616 ORTHO05D008435 5.5e-48 196.8 357 47.3
GSVIVG01025818001 Vitis vinifera HOM05D006616 ORTHO05D008435 1.6e-47 195.3 360 47.8
arahy.Tifrunner.gnm1.ann1.QA0LD5 Arachis hypogaea HOM05D006616 ORTHO05D008435 6.1e-47 193.4 351 45.3
Prupe.7G020500 Prunus persica HOM05D006616 ORTHO05D008435 6.1e-47 193.4 361 44.0
Thecc.05G123900 Theobroma cacao HOM05D006616 ORTHO05D008435 1.0e-46 192.6 361 44.9
Lj5g0015037 Lotus japonicus HOM05D006616 ORTHO05D008435 4.0e-46 190.7 368 45.1
Ciclev10011646m.g Citrus clementina HOM05D006616 ORTHO05D008435 5.2e-46 190.3 360 47.5
TWI74G0800 Tripterygium wilfordii HOM05D006616 ORTHO05D008435 8.9e-46 189.5 360 46.4
arahy.Tifrunner.gnm1.ann1.958W0C Arachis hypogaea HOM05D006616 ORTHO05D008435 1.5e-45 188.7 351 45.0
CDE04G3611 Ceratophyllum demersum HOM05D006616 ORTHO05D008435 2.0e-45 188.3 410 42.9
SalBow2G2978 Salvia bowleyana HOM05D006616 ORTHO05D008435 2.6e-45 188.0 366 38.0
CANSAT78G0100 Cannabis sativa HOM05D006616 ORTHO05D008435 4.4e-45 187.2 360 44.4
Cc10_g12770 Coffea canephora HOM05D006616 ORTHO05D008435 5.7e-45 186.8 362 42.8
Ca_02795_v3 Cicer arietinum L. HOM05D006616 ORTHO05D008435 7.5e-45 186.4 351 46.4
Atru.chr1.1509 Acer truncatum HOM05D006616 ORTHO05D008435 1.3e-44 185.7 359 45.1
VMungo0720G0485 Vigna mungo HOM05D006616 ORTHO05D008435 1.7e-44 185.3 348 40.8
Aqoxy3G00148 Aquilegia oxysepala HOM05D006616 ORTHO05D008435 2.8e-44 184.5 634 35.2
CiPaw.10G044000 Carya illinoinensis HOM05D006616 ORTHO05D008435 3.7e-44 184.1 351 44.7
Migut.N03264 Erythranthe guttata HOM05D006616 ORTHO05D008435 4.9e-44 183.7 401 42.1
MD00G1150000 Malus domestica HOM05D006616 ORTHO05D008435 4.9e-44 183.7 362 43.6
Potri.006G032200 Populus trichocarpa HOM05D006616 ORTHO05D008435 4.9e-44 183.7 358 42.5
Rhsim11G0071400 Rhododendron simsii HOM05D006616 ORTHO05D008435 4.9e-44 183.7 363 45.7
Medtr1g051155 Medicago truncatula HOM05D006616 ORTHO05D008435 1.8e-43 181.8 352 44.6
Peaxi162Scf00066g00130 Petunia axillaris HOM05D006616 ORTHO05D008435 2.4e-43 181.4 354 44.4
ECA246G4188 Erigeron canadensis HOM05D006616 ORTHO05D008435 3.2e-43 181.0 361 42.4
CAN.G526.15 Capsicum annuum HOM05D006616 ORTHO05D008435 4.1e-43 180.6 356 43.5
Lalb_Chr21g0316821 Lupinus albus HOM05D006616 ORTHO05D008435 4.1e-43 180.6 354 46.6
Oeu038315.2 Olea europaea HOM05D006616 ORTHO05D008435 7.0e-43 179.9 381 41.7
TPR.G13802 Trifolium pratense HOM05D006616 ORTHO05D008435 9.2e-43 179.5 355 44.2
CSS0027023 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 1.2e-42 179.1 445 41.6
Sabra06G0021500 Salix brachista HOM05D006616 ORTHO05D008435 1.6e-42 178.7 351 43.3
Duzib128G1745 Durio zibethinus HOM05D006616 ORTHO05D008435 2.7e-42 177.9 361 44.0
Manes.09G002500 Manihot esculenta HOM05D006616 ORTHO05D008435 2.7e-42 177.9 357 43.1
QL07p014063 Quercus lobata HOM05D006616 ORTHO05D008435 2.7e-42 177.9 406 39.7
Gorai.007G351400 Gossypium raimondii HOM05D006616 ORTHO05D008435 3.5e-42 177.6 356 44.7
Phvul.007G243700 Phaseolus vulgaris HOM05D006616 ORTHO05D008435 3.5e-42 177.6 348 40.2
Gohir.A11G305800 Gossypium hirsutum HOM05D006616 ORTHO05D008435 4.6e-42 177.2 356 43.3
RcHm_v2.0_Chr3g0494671 Rosa chinensis HOM05D006616 ORTHO05D008435 1.3e-41 175.6 351 44.2
Solyc11g005110.3 Solanum lycopersicum HOM05D006616 ORTHO05D008435 1.7e-41 175.3 355 44.5
Cfa019948 Carpinus fangiana HOM05D006616 ORTHO05D008435 2.9e-41 174.5 371 43.4
Sopen11g001110 Solanum pennellii HOM05D006616 ORTHO05D008435 6.6e-41 173.3 355 44.2
Hund19065 Selenicereus undatus HOM05D006616 ORTHO05D008435 8.6e-41 172.9 462 40.3
Lsat_1_v5_gn_6_110180 Lactuca sativa HOM05D006616 ORTHO05D008435 1.1e-40 172.6 354 43.2
Gohir.D11G321200 Gossypium hirsutum HOM05D006616 ORTHO05D008435 1.9e-40 171.8 356 44.7
Psat6g087360 Pisum sativum HOM05D006616 ORTHO05D008435 3.3e-40 171.0 365 42.5
HPP92_023122 Vanilla planifolia HOM05D006616 ORTHO05D008435 5.6e-40 170.2 353 41.6
PGR042G1816 Punica granatum HOM05D006616 ORTHO05D008435 7.3e-40 169.9 567 37.2
SGA_v2.0_scaffold25G11136 Striga asiatica HOM05D006616 ORTHO05D008435 1.2e-39 169.1 356 43.0
HanXRQChr05g0149371 Helianthus annuus HOM05D006616 ORTHO05D008435 5.2e-38 163.7 451 38.4
Sed0024074 Sechium edule HOM05D006616 ORTHO05D008435 1.5e-37 162.2 393 39.9
Zm00001eb364810 Zea mays HOM05D006616 ORTHO05D008435 1.5e-37 162.2 355 41.7
Ah.13g077310 Amaranthus hybridus HOM05D006616 ORTHO05D008435 4.4e-37 160.6 579 34.2
MSTRG.24176 Avicennia marina HOM05D006616 ORTHO05D008435 4.4e-37 160.6 363 41.6
Eucgr.A02183 Eucalyptus grandis HOM05D006616 ORTHO05D008435 7.5e-37 159.8 660 32.6
Hma1.2p1_2178F.1_g316200 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 7.5e-37 159.8 281 41.6
CSS0040058 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 1.3e-36 159.1 355 43.1
THA.LOC104815412 Tarenaya hassleriana HOM05D006616 ORTHO05D008435 1.7e-36 158.7 362 42.5
FvH4_1g29230 Fragaria vesca HOM05D006616 ORTHO05D008435 2.2e-36 158.3 348 42.2
Os01g0916300 Oryza sativa ssp. japonica HOM05D006616 ORTHO05D008435 2.2e-36 158.3 355 40.8
EL10Ac3g07308 Beta vulgaris HOM05D006616 ORTHO05D008435 8.3e-36 156.4 424 38.2
FAN26G1972 Fragaria x ananassa HOM05D006616 ORTHO05D008435 9.2e-35 152.9 347 42.9
AUR62018417 Chenopodium quinoa HOM05D006616 ORTHO05D008435 2.7e-34 151.4 636 33.8
CsaV3_3G040470 Cucumis sativus L. HOM05D006616 ORTHO05D008435 3.5e-34 151.0 472 35.6
Nitab4.5_0001168g0150 Nicotiana tabacum HOM05D006616 ORTHO05D008435 3.5e-34 151.0 377 31.6
FAN28G1824 Fragaria x ananassa HOM05D006616 ORTHO05D008435 7.8e-34 149.8 347 41.5
Aa31LG3G1010 Aethionema arabicum HOM05D006616 ORTHO05D008435 1.0e-33 149.4 360 38.9
CBR_g8767 Chara braunii HOM05D006616 ORTHO05D008435 1.3e-33 149.1 404 38.1
DCAR_014373 Daucus carota HOM05D006616 ORTHO05D008435 1.3e-33 149.1 559 33.3
FAN19G2668 Fragaria x ananassa HOM05D006616 ORTHO05D008435 1.3e-33 149.1 346 40.5
AUR62021025 Chenopodium quinoa HOM05D006616 ORTHO05D008435 3.0e-33 147.9 598 35.5
Lj7A350T24 Lonicera japonica HOM05D006616 ORTHO05D008435 3.0e-33 147.9 376 33.5
Sc13g0000840 Simmondsia chinensis HOM05D006616 ORTHO05D008435 8.6e-33 146.4 524 31.3
ClCG10G015990 Citrullus lanatus HOM05D006616 ORTHO05D008435 1.1e-32 146.0 370 40.8
BcaC02g12875 Brassica carinata HOM05D006616 ORTHO05D008435 1.5e-32 145.6 362 38.4
C04p68740 Brassica napus HOM05D006616 ORTHO05D008435 2.5e-32 144.8 362 38.1
BolC4t28379H Brassica oleracea HOM05D006616 ORTHO05D008435 2.5e-32 144.8 362 38.1
PSO017G2359 Papaver somniferum HOM05D006616 ORTHO05D008435 2.5e-32 144.8 299 43.1
AT2G41020 Arabidopsis thaliana HOM05D006616 ORTHO05D008435 3.3e-32 144.4 360 38.9
Thhalv10002504m.g Eutrema salsugineum HOM05D006616 ORTHO05D008435 2.8e-31 141.4 389 35.7
A04p31340 Brassica napus HOM05D006616 ORTHO05D002641 3.6e-31 141.0 365 38.6
Sp4g23340 Schrenkiella parvula HOM05D006616 ORTHO05D008435 8.1e-31 139.8 365 38.6
BraA04t18591Z Brassica rapa HOM05D006616 ORTHO05D002641 1.4e-30 139.0 365 38.1
AL4G39000 Arabidopsis lyrata HOM05D006616 ORTHO05D008435 1.8e-30 138.7 360 38.1
Cpa.g.sc33.190 Carica papaya HOM05D006616 ORTHO05D008435 7.1e-27 126.7 259 37.8
Nitab4.5_0003863g0030 Nicotiana tabacum HOM05D006616 ORTHO05D008435 2.1e-26 125.2 224 37.9
Actinidia25416 Actinidia chinensis HOM05D006616 ORTHO05D008435 4.6e-26 124.0 280 35.7
unitig_52.g17546 Utricularia gibba HOM05D006616 ORTHO05D008435 3.0e-25 121.3 354 34.7
Carub.0004s2335 Capsella rubella HOM05D006616 ORTHO05D008435 2.1e-23 115.2 367 36.8
COL.COLO4_33517 Corchorus olitorius HOM05D006616 ORTHO05D008435 2.6e-21 108.2 191 38.7
CARHR136140 Cardamine hirsuta HOM05D006616 ORTHO05D008435 9.9e-21 106.3 327 37.0
MELO3C009780.2 Cucumis melo HOM05D006616 ORTHO05D008435 2.4e-14 85.1 273 29.7
Psat1g016240 Pisum sativum HOM05D006616 ORTHO05D008435 3.1e-14 84.7 110 50.0
Psat7g065560 Pisum sativum HOM05D006616 ORTHO05D008435 5.2e-14 84.0 115 47.8
PSO478G1191 Papaver somniferum HOM05D006616 ORTHO05D008435 3.4e-13 81.3 181 45.3
Haze_20291 Corylus avellana HOM05D006616 ORTHO05D008435 7.6e-13 80.1 92 50.0
vmacro00863 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 2.9e-12 78.2 83 54.2
AagrBONN_evm.TU.Sc2ySwM_228.200 Anthoceros agrestis HOM05D006616 ORTHO05D008435 1.9e-11 75.5 138 31.2
Actinidia29490 Actinidia chinensis HOM05D006616 ORTHO05D008435 1.1e-06 59.7 143 34.3
MCO09G511 Micromonas commoda HOM05D006616 ORTHO05D008435 1.8e-06 58.9 175 33.1


User provided reference genes

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