Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 4.1e-153 544.7 269 100.0
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 1.3e-74 283.9 223 64.6
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 1.7e-74 283.5 226 64.6
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 2.9e-74 282.7 226 65.0
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 8.5e-74 281.2 225 62.2
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 8.5e-74 281.2 226 62.8
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.1e-73 280.8 225 62.2
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 7.2e-73 278.1 227 63.0
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 9.3e-73 277.7 223 62.3
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 9.3e-73 277.7 224 62.9
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 1.6e-72 276.9 228 61.4
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 2.1e-72 276.6 228 62.7
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 6.1e-72 275.0 226 62.4
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 6.1e-72 275.0 226 62.4
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 1.3e-71 273.9 223 62.3
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 1.3e-71 273.9 226 61.1
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 1.3e-71 273.9 226 62.4
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 1.3e-71 273.9 217 64.1
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 1.3e-71 273.9 246 59.3
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 1.8e-71 273.5 226 61.5
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 1.8e-71 273.5 226 61.5
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 3.0e-71 272.7 214 65.0
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 3.0e-71 272.7 226 61.9
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 3.9e-71 272.3 224 62.1
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 3.9e-71 272.3 225 61.8
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 3.9e-71 272.3 224 60.7
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 3.9e-71 272.3 215 62.8
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 6.7e-71 271.6 227 60.8
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 8.7e-71 271.2 225 61.3
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 8.7e-71 271.2 223 63.2
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 8.7e-71 271.2 215 63.7
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 1.1e-70 270.8 227 62.6
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 1.1e-70 270.8 225 60.9
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 1.5e-70 270.4 216 63.9
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 1.5e-70 270.4 226 61.9
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 1.5e-70 270.4 226 60.6
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 1.5e-70 270.4 225 60.0
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 1.9e-70 270.0 228 60.1
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 1.9e-70 270.0 224 62.5
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 1.9e-70 270.0 235 60.0
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 3.3e-70 269.2 226 60.6
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 3.3e-70 269.2 231 60.2
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 3.3e-70 269.2 225 60.9
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 4.3e-70 268.9 223 62.8
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 4.3e-70 268.9 211 63.5
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 4.3e-70 268.9 227 62.6
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 4.3e-70 268.9 231 59.7
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 5.7e-70 268.5 251 57.0
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 5.7e-70 268.5 223 61.4
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 7.4e-70 268.1 226 61.1
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 7.4e-70 268.1 223 61.4
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 9.7e-70 267.7 225 59.6
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 1.3e-69 267.3 227 60.4
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 1.3e-69 267.3 232 59.5
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 1.3e-69 267.3 211 64.0
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 1.3e-69 267.3 223 61.0
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 1.6e-69 266.9 233 59.2
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 2.2e-69 266.5 225 62.2
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 2.2e-69 266.5 227 61.7
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 2.8e-69 266.2 250 56.4
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 2.8e-69 266.2 223 61.0
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 3.7e-69 265.8 230 60.9
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 3.7e-69 265.8 250 56.4
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 3.7e-69 265.8 227 60.8
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 3.7e-69 265.8 227 60.8
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 4.8e-69 265.4 250 56.4
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 4.8e-69 265.4 225 61.8
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 4.8e-69 265.4 220 61.4
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 4.8e-69 265.4 227 60.4
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 6.3e-69 265.0 236 58.9
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 6.3e-69 265.0 236 58.9
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 6.3e-69 265.0 223 60.1
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 6.3e-69 265.0 223 60.5
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 8.2e-69 264.6 227 60.4
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 8.2e-69 264.6 223 61.4
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 1.1e-68 264.2 226 60.2
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 1.1e-68 264.2 226 61.1
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 1.1e-68 264.2 244 57.4
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 1.8e-68 263.5 233 58.8
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 1.8e-68 263.5 225 61.8
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 3.1e-68 262.7 206 65.5
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 3.1e-68 262.7 223 60.5
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 3.1e-68 262.7 226 58.8
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 4.1e-68 262.3 229 59.8
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 4.1e-68 262.3 215 61.9
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 4.1e-68 262.3 239 57.3
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 5.3e-68 261.9 223 61.4
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.2e-67 260.8 226 60.6
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 2.0e-67 260.0 245 55.9
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 7.7e-67 258.1 251 54.2
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 1.0e-66 257.7 229 59.0
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 2.2e-66 256.5 229 59.0
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 2.9e-66 256.1 227 58.6
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 5.0e-66 255.4 241 55.6
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 8.5e-66 254.6 229 55.0
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 3.2e-65 252.7 226 58.0
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 4.2e-65 252.3 201 64.7
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 1.0e-63 247.7 211 60.7
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 3.0e-63 246.1 204 60.8
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 8.8e-63 244.6 239 54.4
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 2.6e-62 243.0 232 55.6
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 1.7e-61 240.4 240 54.2
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 8.2e-61 238.0 225 55.1
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 1.1e-60 237.7 216 56.9
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 3.1e-60 236.1 295 47.1
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 7.9e-56 221.5 178 64.0
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 1.0e-55 221.1 171 66.1
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 2.2e-50 203.4 226 49.6
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 1.6e-43 180.6 303 40.3
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 1.2e-38 164.5 146 57.5
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 1.2e-38 164.5 136 60.3
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 5.7e-38 162.2 146 56.8
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 5.7e-38 162.2 146 56.8
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 2.2e-37 160.2 140 58.6
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 2.8e-37 159.8 126 61.9
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 1.0e-31 141.4 120 62.5
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 5.7e-30 135.6 117 59.8
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 2.4e-28 130.2 121 56.2
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 4.1e-28 129.4 96 66.7
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 1.5e-25 120.9 75 72.0
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 4.4e-22 109.4 112 53.6
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 5.7e-22 109.0 93 60.2
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 1.2e-11 74.7 152 32.2
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 8.6e-10 68.6 52 67.3
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 2.8e-08 63.5 47 61.7
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 5.2e-07 59.3 117 35.0
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 6.8e-07 58.9 58 50.0
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 1.5e-06 57.8 117 35.0


User provided reference genes

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