Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_27963 Sequoiadendron giganteum HOM05D003893 ORTHO05D005167 0.0e+00 1095.1 543 100.0
TAR375G0027 Trochodendron aralioides HOM05D003893 ORTHO05D005167 1.5e-82 311.2 509 35.2
Potri.001G150900 Populus trichocarpa HOM05D003893 ORTHO05D005167 3.8e-81 306.6 506 36.0
Nitab4.5_0000500g0300 Nicotiana tabacum HOM05D003893 ORTHO05D005167 1.9e-80 304.3 526 35.2
Solyc08g077850.2 Solanum lycopersicum HOM05D003893 ORTHO05D005167 3.2e-80 303.5 511 34.6
QL12p008764 Quercus lobata HOM05D003893 ORTHO05D005167 5.5e-80 302.8 500 37.0
Atru.chr9.1207 Acer truncatum HOM05D003893 ORTHO05D005167 1.2e-79 301.6 500 37.4
Sabra01G0120900 Salix brachista HOM05D003893 ORTHO05D005167 1.0e-78 298.5 506 34.8
Sopen08g026360 Solanum pennellii HOM05D003893 ORTHO05D005167 5.1e-78 296.2 502 34.7
CSS0002187 Camellia sinensis var. sinensis HOM05D003893 ORTHO05D005167 1.9e-77 294.3 512 34.8
DCAR_005586 Daucus carota HOM05D003893 ORTHO05D005167 3.3e-77 293.5 513 34.7
Manes.01G088800 Manihot esculenta HOM05D003893 ORTHO05D005167 5.7e-77 292.7 501 36.5
CAN.G572.10 Capsicum annuum HOM05D003893 ORTHO05D005167 4.8e-76 289.7 522 34.9
CANSAT21G1178 Cannabis sativa HOM05D003893 ORTHO05D005167 6.3e-76 289.3 516 34.9
Eucgr.E00353 Eucalyptus grandis HOM05D003893 ORTHO05D005167 8.2e-76 288.9 509 36.3
PGR042G1290 Punica granatum HOM05D003893 ORTHO05D005167 1.1e-75 288.5 515 33.2
Dinv25135 Davidia involucrata HOM05D003893 ORTHO05D005167 5.3e-75 286.2 510 35.3
Peaxi162Scf00301g00417 Petunia axillaris HOM05D003893 ORTHO05D005167 5.3e-75 286.2 525 34.3
PSO675G1423 Papaver somniferum HOM05D003893 ORTHO05D005167 6.9e-75 285.8 505 36.0
Rhsim11G0002100 Rhododendron simsii HOM05D003893 ORTHO05D005167 9.0e-75 285.4 505 33.5
Thecc.03G240200 Theobroma cacao HOM05D003893 ORTHO05D005167 1.2e-74 285.0 507 35.1
Lalb_Chr09g0329781 Lupinus albus HOM05D003893 ORTHO05D005167 2.6e-74 283.9 509 34.6
Gorai.008G230900 Gossypium raimondii HOM05D003893 ORTHO05D005167 4.5e-74 283.1 520 34.4
Actinidia25908 Actinidia chinensis HOM05D003893 ORTHO05D005167 1.0e-73 282.0 511 33.1
Duzib205G1731 Durio zibethinus HOM05D003893 ORTHO05D005167 1.0e-73 282.0 505 34.3
PSO732G0344 Papaver somniferum HOM05D003893 ORTHO05D005167 1.0e-73 282.0 508 35.8
Prupe.5G055400 Prunus persica HOM05D003893 ORTHO05D005167 1.0e-73 282.0 507 33.9
THA.LOC104798352 Tarenaya hassleriana HOM05D003893 ORTHO05D005167 1.0e-73 282.0 509 35.8
FvH4_5g20370 Fragaria vesca HOM05D003893 ORTHO05D005167 1.3e-73 281.6 504 34.3
Mapoly0105s0045 Marchantia polymorpha HOM05D003893 ORTHO05D005167 1.3e-73 281.6 515 35.5
MELO3C013898.2 Cucumis melo HOM05D003893 ORTHO05D005167 3.8e-73 280.0 513 35.3
MSTRG.1953 Avicennia marina HOM05D003893 ORTHO05D005167 5.0e-73 279.6 510 34.1
Aqoxy5G02623 Aquilegia oxysepala HOM05D003893 ORTHO05D005167 1.4e-72 278.1 510 34.5
Cfa012326 Carpinus fangiana HOM05D003893 ORTHO05D005167 3.2e-72 276.9 407 39.6
RcHm_v2.0_Chr7g0205631 Rosa chinensis HOM05D003893 ORTHO05D005167 4.2e-72 276.6 506 32.4
Cc08_g11340 Coffea canephora HOM05D003893 ORTHO05D005167 7.2e-72 275.8 526 32.7
ClCG10G002220 Citrullus lanatus HOM05D003893 ORTHO05D005167 9.4e-72 275.4 505 35.2
CsaV3_3G002270 Cucumis sativus L. HOM05D003893 ORTHO05D005167 1.6e-71 274.6 512 35.2
Gohir.A12G212800 Gossypium hirsutum HOM05D003893 ORTHO05D005167 3.6e-71 273.5 509 34.6
Medtr4g099300 Medicago truncatula HOM05D003893 ORTHO05D005167 3.6e-71 273.5 509 34.4
FAN18G3472 Fragaria x ananassa HOM05D003893 ORTHO05D005167 1.0e-70 271.9 513 33.5
EL10Ac5g12271 Beta vulgaris HOM05D003893 ORTHO05D005167 2.3e-70 270.8 495 36.0
AT4G17610 Arabidopsis thaliana HOM05D003893 ORTHO05D005167 6.7e-70 269.2 510 33.1
TPR.G25755 Trifolium pratense HOM05D003893 ORTHO05D005167 8.8e-70 268.9 507 33.5
Ca_22016_v3 Cicer arietinum L. HOM05D003893 ORTHO05D005167 1.1e-69 268.5 512 34.2
Lj4g0018101 Lotus japonicus HOM05D003893 ORTHO05D005167 1.5e-69 268.1 508 34.4
FAN08G3381 Fragaria x ananassa HOM05D003893 ORTHO05D005167 3.3e-69 266.9 511 33.5
Glyma.17G148200 Glycine max HOM05D003893 ORTHO05D005167 4.3e-69 266.5 512 34.6
Aa31LG6G350 Aethionema arabicum HOM05D003893 ORTHO05D005167 5.7e-69 266.2 507 34.3
Ciclev10024446m.g Citrus clementina HOM05D003893 ORTHO05D005167 5.7e-69 266.2 510 34.3
Psat4g076000 Pisum sativum HOM05D003893 ORTHO05D005167 5.7e-69 266.2 506 34.0
AUR62018840 Chenopodium quinoa HOM05D003893 ORTHO05D005167 7.4e-69 265.8 500 33.6
BcaNung00076 Brassica carinata HOM05D003893 ORTHO05D005167 9.7e-69 265.4 503 34.0
Migut.E01633 Erythranthe guttata HOM05D003893 ORTHO05D005167 9.7e-69 265.4 515 32.6
CARHR224310 Cardamine hirsuta HOM05D003893 ORTHO05D005167 2.2e-68 264.2 502 33.9
Carub.0007s2378 Capsella rubella HOM05D003893 ORTHO05D005167 6.3e-68 262.7 503 32.6
Thhalv10024195m.g Eutrema salsugineum HOM05D003893 ORTHO05D005167 8.2e-68 262.3 503 34.6
Sc07g0009060 Simmondsia chinensis HOM05D003893 ORTHO05D005167 1.1e-67 261.9 509 32.4
Phvul.003G225400 Phaseolus vulgaris HOM05D003893 ORTHO05D005167 2.4e-67 260.8 511 34.8
AL7G36990 Arabidopsis lyrata HOM05D003893 ORTHO05D005167 6.9e-67 259.2 502 33.3
Oeu054285.1 Olea europaea HOM05D003893 ORTHO05D005167 6.9e-67 259.2 490 34.7
Sed0003705 Sechium edule HOM05D003893 ORTHO05D005167 9.1e-67 258.8 515 34.0
Hund14479 Selenicereus undatus HOM05D003893 ORTHO05D005167 2.0e-66 257.7 490 35.1
HanXRQChr16g0504541 Helianthus annuus HOM05D003893 ORTHO05D005167 2.2e-65 254.2 505 32.5
Sp7g16550 Schrenkiella parvula HOM05D003893 ORTHO05D005167 2.2e-65 254.2 500 33.8
C01p11280 Brassica napus HOM05D003893 ORTHO05D005167 2.5e-64 250.8 500 33.0
BolC1t01093H Brassica oleracea HOM05D003893 ORTHO05D005167 2.5e-64 250.8 500 33.0
A01p09670 Brassica napus HOM05D003893 ORTHO05D005167 3.9e-62 243.4 502 32.9
BcaC09g51627 Brassica carinata HOM05D003893 ORTHO05D005167 5.1e-62 243.0 501 32.7
BraA01t00910Z Brassica rapa HOM05D003893 ORTHO05D005167 6.7e-62 242.7 500 32.2
SGA_v2.0_scaffold20G09254 Striga asiatica HOM05D003893 ORTHO05D005167 4.4e-61 240.0 333 40.5
ECA233G0269 Erigeron canadensis HOM05D003893 ORTHO05D005167 9.7e-61 238.8 328 40.2
arahy.Tifrunner.gnm1.ann1.763U0W Arachis hypogaea HOM05D003893 ORTHO05D005167 1.3e-60 238.4 490 35.3
Gohir.D12G215300 Gossypium hirsutum HOM05D003893 ORTHO05D005167 3.7e-60 236.9 288 44.1
Lsat_1_v5_gn_6_67000 Lactuca sativa HOM05D003893 ORTHO05D005167 7.7e-58 229.2 508 30.7
Zm00001eb000190 Zea mays HOM05D003893 ORTHO05D005167 1.0e-57 228.8 497 31.6
ATR0665G055 Amborella trichopoda HOM05D003893 ORTHO05D005167 8.0e-55 219.2 409 35.7
arahy.Tifrunner.gnm1.ann1.TA1JJE Arachis hypogaea HOM05D003893 ORTHO05D005167 3.3e-53 213.8 471 34.4
Lj8C277G4 Lonicera japonica HOM05D003893 ORTHO05D005167 9.7e-53 212.2 428 34.8
Nitab4.5_0009451g0070 Nicotiana tabacum HOM05D003893 ORTHO05D005167 4.8e-52 209.9 242 44.6
vmacro17755 Vaccinium macrocarpon HOM05D003893 ORTHO05D005167 3.5e-50 203.8 489 30.5
MD04G1055600 Malus domestica HOM05D003893 ORTHO05D005167 1.7e-49 201.4 239 44.4
AUR62007166 Chenopodium quinoa HOM05D003893 ORTHO05D005167 2.3e-46 191.0 426 31.9
Haze_08365 Corylus avellana HOM05D003893 ORTHO05D005167 2.0e-45 188.0 396 32.8
SalBow1G0831 Salvia bowleyana HOM05D003893 ORTHO05D005167 1.0e-41 175.6 413 32.4
CDE12G0047 Ceratophyllum demersum HOM05D003893 ORTHO05D005167 2.5e-40 171.0 179 48.6
COL.COLO4_07201 Corchorus olitorius HOM05D003893 ORTHO05D005167 6.8e-38 162.9 396 31.1
COL.COLO4_22133 Corchorus olitorius HOM05D003893 ORTHO05D005167 2.0e-34 151.4 253 37.2
CBR_g21120 Chara braunii HOM05D003893 ORTHO05D005167 1.4e-30 138.7 348 31.0
VMungo0251G3747 Vigna mungo HOM05D003893 ORTHO05D005167 1.0e-25 122.5 681 22.5
Os10g0142900 Oryza sativa ssp. japonica HOM05D003893 ORTHO05D005167 4.3e-24 117.1 189 38.1
Haze_08366 Corylus avellana HOM05D003893 ORTHO05D005167 6.8e-22 109.8 80 56.2
Ca_30504_v3 Cicer arietinum L. HOM05D003893 ORTHO05D005167 1.9e-19 101.7 80 51.2
Ah.07g199160 Amaranthus hybridus HOM05D003893 ORTHO05D005167 3.9e-17 94.0 69 53.6
Migut.E01263 Erythranthe guttata HOM05D003893 ORTHO05D005167 8.6e-17 92.8 294 26.2
SalBow1G6370 Salvia bowleyana HOM05D003893 ORTHO05D005167 6.8e-14 83.2 69 49.3
unitig_21.g20369 Utricularia gibba HOM05D003893 ORTHO05D005167 4.9e-12 77.0 121 40.5


User provided reference genes

Program Settings