Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_27844 Sequoiadendron giganteum HOM05D003492 ORTHO05D005115 6.9e-306 1053.1 524 100.0
PSO339G2087 Papaver somniferum HOM05D003492 ORTHO05D005115 3.5e-193 678.7 522 63.8
PSO384G0172 Papaver somniferum HOM05D003492 ORTHO05D005115 3.5e-193 678.7 522 63.8
TAR623G0495 Trochodendron aralioides HOM05D003492 ORTHO05D005115 2.5e-191 672.5 527 64.3
Thecc.10G014500 Theobroma cacao HOM05D003492 ORTHO05D005115 8.2e-190 667.5 522 61.9
Gohir.A10G240100 Gossypium hirsutum HOM05D003492 ORTHO05D005115 1.8e-189 666.4 522 62.6
Gohir.D10G252000 Gossypium hirsutum HOM05D003492 ORTHO05D005115 1.8e-189 666.4 522 62.6
Gorai.011G292500 Gossypium raimondii HOM05D003492 ORTHO05D005115 1.8e-189 666.4 522 62.6
Atru.chr12.67 Acer truncatum HOM05D003492 ORTHO05D005115 6.9e-189 664.5 524 63.5
Prupe.2G252000 Prunus persica HOM05D003492 ORTHO05D005115 1.2e-188 663.7 523 62.0
Aqoxy4G02502 Aquilegia oxysepala HOM05D003492 ORTHO05D005115 2.6e-188 662.5 530 61.7
Ciclev10030498m.g Citrus clementina HOM05D003492 ORTHO05D005115 4.5e-188 661.8 523 62.5
Duzib106G0351 Durio zibethinus HOM05D003492 ORTHO05D005115 7.6e-188 661.0 522 61.9
Rhsim09G0177900 Rhododendron simsii HOM05D003492 ORTHO05D005115 7.6e-188 661.0 523 63.3
ATR0681G383 Amborella trichopoda HOM05D003492 ORTHO05D005115 1.0e-187 660.6 524 63.5
Nn2g10890 Nelumbo nucifera HOM05D003492 ORTHO05D005115 3.8e-187 658.7 523 63.3
TWI09G0940 Tripterygium wilfordii HOM05D003492 ORTHO05D005115 3.8e-187 658.7 523 62.1
MD07G1223400 Malus domestica HOM05D003492 ORTHO05D005115 5.0e-187 658.3 524 61.3
DCAR_011823 Daucus carota HOM05D003492 ORTHO05D005115 1.9e-186 656.4 522 61.7
CiPaw.01G300000 Carya illinoinensis HOM05D003492 ORTHO05D005115 7.2e-186 654.4 522 62.1
Lalb_Chr04g0250511 Lupinus albus HOM05D003492 ORTHO05D005115 7.2e-186 654.4 520 61.2
QL08p063313 Quercus lobata HOM05D003492 ORTHO05D005115 7.2e-186 654.4 523 61.6
arahy.Tifrunner.gnm1.ann1.J7W2E5 Arachis hypogaea HOM05D003492 ORTHO05D005115 1.2e-185 653.7 522 61.1
FAN10G4174 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.2e-185 653.7 523 60.8
Cfa001305 Carpinus fangiana HOM05D003492 ORTHO05D005115 2.1e-185 652.9 522 61.5
arahy.Tifrunner.gnm1.ann1.V2YUX7 Arachis hypogaea HOM05D003492 ORTHO05D005115 2.7e-185 652.5 522 60.9
LjContig00357g0011776 Lotus japonicus HOM05D003492 ORTHO05D005115 2.7e-185 652.5 520 61.2
GSVIVG01032797001 Vitis vinifera HOM05D003492 ORTHO05D005115 2.7e-185 652.5 523 62.1
Cpa.g.sc19.161 Carica papaya HOM05D003492 ORTHO05D005115 3.6e-185 652.1 522 61.7
CANSAT56G1673 Cannabis sativa HOM05D003492 ORTHO05D005115 1.3e-184 650.2 523 62.1
Potri.008G070300 Populus trichocarpa HOM05D003492 ORTHO05D005115 1.3e-184 650.2 520 61.9
CSS0013780 Camellia sinensis var. sinensis HOM05D003492 ORTHO05D005115 1.8e-184 649.8 520 62.7
FvH4_7g24630 Fragaria vesca HOM05D003492 ORTHO05D005115 1.8e-184 649.8 523 60.8
RcHm_v2.0_Chr1g0370461 Rosa chinensis HOM05D003492 ORTHO05D005115 2.3e-184 649.4 521 61.2
FAN06G4945 Fragaria x ananassa HOM05D003492 ORTHO05D005115 5.1e-184 648.3 523 60.6
Medtr5g082890 Medicago truncatula HOM05D003492 ORTHO05D005115 7.4e-183 644.4 520 60.4
TPR.G38386 Trifolium pratense HOM05D003492 ORTHO05D005115 1.3e-182 643.7 520 60.0
Dinv10611 Davidia involucrata HOM05D003492 ORTHO05D005115 1.6e-182 643.3 546 60.4
FAN01G1605 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.1e-181 640.6 536 59.1
Psat2g032000 Pisum sativum HOM05D003492 ORTHO05D005115 1.1e-181 640.6 520 59.4
Manes.07G131200 Manihot esculenta HOM05D003492 ORTHO05D005115 1.4e-181 640.2 527 60.0
Ca_05974_v3 Cicer arietinum L. HOM05D003492 ORTHO05D005115 1.8e-181 639.8 522 60.3
Glyma.02G258100 Glycine max HOM05D003492 ORTHO05D005115 2.0e-180 636.3 526 59.7
Glyma.14G058400 Glycine max HOM05D003492 ORTHO05D005115 4.5e-180 635.2 523 59.5
Sed0003450 Sechium edule HOM05D003492 ORTHO05D005115 5.9e-180 634.8 524 59.5
MELO3C026794.2 Cucumis melo HOM05D003492 ORTHO05D005115 1.0e-179 634.0 523 59.5
Phvul.008G222900 Phaseolus vulgaris HOM05D003492 ORTHO05D005115 1.0e-179 634.0 520 59.6
Sabra08G0051700 Salix brachista HOM05D003492 ORTHO05D005115 1.7e-179 633.3 541 59.3
CsaV3_5G010260 Cucumis sativus L. HOM05D003492 ORTHO05D005115 2.9e-179 632.5 523 59.1
MSTRG.8339 Avicennia marina HOM05D003492 ORTHO05D005115 5.0e-179 631.7 523 59.7
VMungo0647G1152 Vigna mungo HOM05D003492 ORTHO05D005115 6.5e-179 631.3 520 59.4
Sc11g0005130 Simmondsia chinensis HOM05D003492 ORTHO05D005115 8.5e-179 630.9 526 60.1
Migut.F01404 Erythranthe guttata HOM05D003492 ORTHO05D005115 1.4e-178 630.2 523 60.0
Sopen06g014600 Solanum pennellii HOM05D003492 ORTHO05D005115 1.4e-178 630.2 523 60.8
ClCG07G004320 Citrullus lanatus HOM05D003492 ORTHO05D005115 3.2e-178 629.0 518 59.5
Peaxi162Scf00284g00913 Petunia axillaris HOM05D003492 ORTHO05D005115 4.2e-178 628.6 523 60.4
Solyc06g048460.2 Solanum lycopersicum HOM05D003492 ORTHO05D005115 5.5e-178 628.2 523 60.6
THA.LOC104816541 Tarenaya hassleriana HOM05D003492 ORTHO05D005115 9.4e-178 627.5 520 59.0
AUR62012268 Chenopodium quinoa HOM05D003492 ORTHO05D005115 6.1e-177 624.8 523 59.1
vmacro10035 Vaccinium macrocarpon HOM05D003492 ORTHO05D005115 6.1e-177 624.8 559 58.7
Os05g0354300 Oryza sativa ssp. japonica HOM05D003492 ORTHO05D005115 3.9e-176 622.1 526 58.6
SGA_v2.0_scaffold365G49997 Striga asiatica HOM05D003492 ORTHO05D005115 5.1e-176 621.7 517 60.3
Eucgr.G03070 Eucalyptus grandis HOM05D003492 ORTHO05D005115 8.8e-176 620.9 527 59.0
Hund15919 Selenicereus undatus HOM05D003492 ORTHO05D005115 1.1e-175 620.5 527 58.6
HanXRQChr14g0459601 Helianthus annuus HOM05D003492 ORTHO05D005115 3.3e-175 619.0 521 58.7
Lsat_1_v5_gn_2_124500 Lactuca sativa HOM05D003492 ORTHO05D005115 1.3e-174 617.1 520 58.5
BcaB01g05759 Brassica carinata HOM05D003492 ORTHO05D005115 2.2e-174 616.3 525 57.9
PGR142G1812 Punica granatum HOM05D003492 ORTHO05D005115 1.8e-173 613.2 526 56.5
CARHR207700 Cardamine hirsuta HOM05D003492 ORTHO05D005115 5.3e-173 611.7 521 58.2
FAN03G1412 Fragaria x ananassa HOM05D003492 ORTHO05D005115 6.9e-173 611.3 498 60.2
AL6G15450 Arabidopsis lyrata HOM05D003492 ORTHO05D005115 9.1e-173 610.9 521 58.0
ECA238G3428 Erigeron canadensis HOM05D003492 ORTHO05D005115 1.2e-172 610.5 520 58.3
CAN.G1193.3 Capsicum annuum HOM05D003492 ORTHO05D005115 1.5e-172 610.1 518 59.3
Sp6g37310 Schrenkiella parvula HOM05D003492 ORTHO05D005115 2.0e-172 609.8 526 57.2
AT5G05560 Arabidopsis thaliana HOM05D003492 ORTHO05D005115 4.5e-172 608.6 521 58.2
Carub.0006s0446 Capsella rubella HOM05D003492 ORTHO05D005115 7.7e-172 607.8 528 57.8
BraA03t09597Z Brassica rapa HOM05D003492 ORTHO05D005115 3.8e-171 605.5 533 56.5
BraA02t04853Z Brassica rapa HOM05D003492 ORTHO05D005115 1.9e-170 603.2 530 56.8
A03p02330 Brassica napus HOM05D003492 ORTHO05D005115 4.2e-170 602.1 533 56.3
Nitab4.5_0000797g0050 Nicotiana tabacum HOM05D003492 ORTHO05D005115 2.7e-169 599.4 483 61.7
EL10Ac2g04850 Beta vulgaris HOM05D003492 ORTHO05D005115 4.7e-169 598.6 595 52.6
BolC2t06204H Brassica oleracea HOM05D003492 ORTHO05D005115 1.8e-168 596.7 530 56.2
C02p02390 Brassica napus HOM05D003492 ORTHO05D005115 2.3e-168 596.3 536 55.8
unitig_60.g25675 Utricularia gibba HOM05D003492 ORTHO05D005115 5.2e-168 595.1 522 58.4
C03p02660 Brassica napus HOM05D003492 ORTHO05D005115 7.4e-167 591.3 533 55.3
HPP92_012039 Vanilla planifolia HOM05D003492 ORTHO05D005115 1.7e-166 590.1 523 57.6
Aa31LG11G6620 Aethionema arabicum HOM05D003492 ORTHO05D005115 2.2e-166 589.7 521 56.6
BolC3t12820H Brassica oleracea HOM05D003492 ORTHO05D005115 2.2e-166 589.7 545 54.5
AagrBONN_evm.TU.Sc2ySwM_344.5492 Anthoceros agrestis HOM05D003492 ORTHO05D005115 6.3e-166 588.2 521 58.7
Pp3c11_19460 Physcomitrium patens HOM05D003492 ORTHO05D005115 1.2e-164 583.9 526 56.8
Mapoly0044s0071 Marchantia polymorpha HOM05D003492 ORTHO05D005115 1.6e-164 583.6 532 57.5
CDE12G0911 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 2.0e-164 583.2 468 61.3
Haze_17240 Corylus avellana HOM05D003492 ORTHO05D005115 2.2e-163 579.7 616 50.6
BcaB01g05953 Brassica carinata HOM05D003492 ORTHO05D005115 2.9e-163 579.3 525 55.4
AUR62022903 Chenopodium quinoa HOM05D003492 ORTHO05D005115 4.8e-158 562.0 523 54.5
SMO105G0008 Selaginella moellendorffii HOM05D003492 ORTHO05D005115 4.5e-156 555.4 544 55.7
Ah.16g103640 Amaranthus hybridus HOM05D003492 ORTHO05D005115 7.2e-154 548.1 527 53.3
CBR_g22845 Chara braunii HOM05D003492 ORTHO05D005115 2.0e-148 530.0 584 49.8
Thhalv10012420m.g Eutrema salsugineum HOM05D003492 ORTHO05D005115 1.0e-144 517.7 520 51.9
SHI03328 Sapria himalayana HOM05D003492 ORTHO05D005115 1.7e-142 510.4 464 53.9
SMO331G0080 Selaginella moellendorffii HOM05D003492 ORTHO05D005115 1.2e-129 467.6 516 51.6
BcaB05g21711 Brassica carinata HOM05D003492 ORTHO05D005115 1.1e-125 454.5 399 56.9
Nitab4.5_0011089g0010 Nicotiana tabacum HOM05D003492 ORTHO05D005115 7.3e-122 441.8 508 49.2
Actinidia13944 Actinidia chinensis HOM05D003492 ORTHO05D005115 2.3e-120 436.8 335 62.7
CAN.G78.71 Capsicum annuum HOM05D003492 ORTHO05D005115 6.4e-110 402.1 327 61.5
MCO04G065 Micromonas commoda HOM05D003492 ORTHO05D005115 1.5e-98 364.4 566 39.4
Lj8A65G43 Lonicera japonica HOM05D003492 ORTHO05D005115 1.5e-95 354.4 312 57.4
Cc02_g06300 Coffea canephora HOM05D003492 ORTHO05D005115 2.6e-71 273.9 210 62.4
Rhsim05G0134800 Rhododendron simsii HOM05D003492 ORTHO05D005115 9.3e-69 265.4 437 39.8
Cre13.g579100 Chlamydomonas reinhardtii HOM05D003492 ORTHO05D005115 3.3e-58 230.3 484 33.3
Cc02_g06280 Coffea canephora HOM05D003492 ORTHO05D005115 1.7e-57 228.0 203 58.6
Lj8C65G6 Lonicera japonica HOM05D003492 ORTHO05D005115 4.1e-56 223.4 205 57.1
SalBow5G5368 Salvia bowleyana HOM05D003492 ORTHO05D005115 4.1e-56 223.4 180 60.6
Rhsim10G0095300 Rhododendron simsii HOM05D003492 ORTHO05D005115 6.9e-56 222.6 225 52.0
Oeu049666.1 Olea europaea HOM05D003492 ORTHO05D005115 3.0e-51 207.2 200 52.0
Zm00001eb286110 Zea mays HOM05D003492 ORTHO05D005115 1.1e-50 205.3 198 51.5
Cfa022850 Carpinus fangiana HOM05D003492 ORTHO05D005115 7.7e-47 192.6 413 32.9
Actinidia35642 Actinidia chinensis HOM05D003492 ORTHO05D005115 1.0e-43 182.2 203 52.2
Cc02_g06290 Coffea canephora HOM05D003492 ORTHO05D005115 8.9e-27 125.9 101 60.4
MBI15_g19421_MAGBIO Magnolia biondii HOM05D003492 ORTHO05D005115 2.2e-25 121.3 225 36.4
Lsat_1_v5_gn_4_75100 Lactuca sativa HOM05D003492 ORTHO05D016080 1.6e-23 115.2 124 44.4
Lsat_1_v5_gn_1_82880 Lactuca sativa HOM05D003492 ORTHO05D005115 3.0e-19 100.9 104 54.8
BcaB01g05927 Brassica carinata HOM05D003492 ORTHO05D016080 7.0e-16 89.7 122 42.6
Lsat_1_v5_gn_7_99341 Lactuca sativa HOM05D003492 ORTHO05D016080 6.6e-14 83.2 69 47.8
Lsat_1_v5_gn_9_80501 Lactuca sativa HOM05D003662 ORTHO05D001824 2.4e-08 64.7 123 38.2


User provided reference genes

Program Settings