Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_27473 Sequoiadendron giganteum HOM05D005566 ORTHO05D007534 0.0e+00 1297.3 670 100.0
Phvul.002G287600 Phaseolus vulgaris HOM05D005566 ORTHO05D007534 1.1e-26 125.9 188 41.5
Nn6g33532 Nelumbo nucifera HOM05D005566 ORTHO05D007534 1.3e-25 122.5 178 39.3
Os02g0115600 Oryza sativa ssp. japonica HOM05D005566 ORTHO05D007534 1.3e-25 122.5 191 37.7
Aqoxy5G04022 Aquilegia oxysepala HOM05D005566 ORTHO05D007534 2.1e-25 121.7 175 40.0
Sc22g0000210 Simmondsia chinensis HOM05D005566 ORTHO05D007534 2.1e-25 121.7 175 41.1
Glyma.08G012600 Glycine max HOM05D005566 ORTHO05D007534 3.6e-25 120.9 188 39.9
Glyma.05G205700 Glycine max HOM05D005566 ORTHO05D007534 4.8e-25 120.6 188 39.9
Dinv38972 Davidia involucrata HOM05D005566 ORTHO05D007534 6.2e-25 120.2 171 42.1
GSVIVG01019806001 Vitis vinifera HOM05D005566 ORTHO05D007534 6.2e-25 120.2 227 35.2
CANSAT21G2631 Cannabis sativa HOM05D005566 ORTHO05D007534 8.1e-25 119.8 185 40.0
Lalb_Chr09g0333291 Lupinus albus HOM05D005566 ORTHO05D007534 8.1e-25 119.8 259 33.6
TAR629G1018 Trochodendron aralioides HOM05D005566 ORTHO05D007534 8.1e-25 119.8 321 32.7
FAN04G1912 Fragaria x ananassa HOM05D005566 ORTHO05D007534 1.4e-24 119.0 320 32.2
Lsat_1_v5_gn_6_5820 Lactuca sativa HOM05D005566 ORTHO05D007534 2.4e-24 118.2 179 40.2
FAN13G1151 Fragaria x ananassa HOM05D005566 ORTHO05D007534 3.1e-24 117.9 317 30.6
Hma1.2p1_1943F.1_g308460 Hydrangea macrophylla HOM05D005566 ORTHO05D007534 6.9e-24 116.7 175 40.6
MBI17_g08175_MAGBIO Magnolia biondii HOM05D005566 ORTHO05D004184 6.9e-24 116.7 191 39.3
PSO782G1537 Papaver somniferum HOM05D005566 ORTHO05D007534 6.9e-24 116.7 233 35.2
FAN08G2943 Fragaria x ananassa HOM05D005566 ORTHO05D007534 9.0e-24 116.3 319 31.7
RcHm_v2.0_Chr7g0198431 Rosa chinensis HOM05D005566 ORTHO05D007534 1.2e-23 115.9 320 33.1
Zm00001eb229900 Zea mays HOM05D005566 ORTHO05D007534 1.2e-23 115.9 318 28.0
FvH4_5g01950 Fragaria vesca HOM05D005566 ORTHO05D007534 1.5e-23 115.5 320 31.9
FAN18G1004 Fragaria x ananassa HOM05D005566 ORTHO05D007534 1.5e-23 115.5 320 31.9
MD06G1077900 Malus domestica HOM05D005566 ORTHO05D007534 1.5e-23 115.5 175 38.9
PSO063G1293 Papaver somniferum HOM05D005566 ORTHO05D007534 1.5e-23 115.5 233 34.3
VMungo0251G1600 Vigna mungo HOM05D005566 ORTHO05D007534 2.6e-23 114.8 283 34.3
Peaxi162Scf00102g01550 Petunia axillaris HOM05D005566 ORTHO05D007534 4.5e-23 114.0 279 33.7
Psat7g035520 Pisum sativum HOM05D005566 ORTHO05D007534 4.5e-23 114.0 279 32.3
PGR031G0987 Punica granatum HOM05D005566 ORTHO05D007534 4.5e-23 114.0 182 39.6
Sopen08g003840 Solanum pennellii HOM05D005566 ORTHO05D007534 5.8e-23 113.6 183 38.8
CSS0044378 Camellia sinensis var. sinensis HOM05D005566 ORTHO05D007534 7.6e-23 113.2 170 39.4
Solyc08g007950.3 Solanum lycopersicum HOM05D005566 ORTHO05D007534 7.6e-23 113.2 183 38.8
Nitab4.5_0004032g0020 Nicotiana tabacum HOM05D005566 ORTHO05D007534 9.9e-23 112.8 269 34.2
SalBow6G1897 Salvia bowleyana HOM05D005566 ORTHO05D007534 1.3e-22 112.5 307 32.2
TWI81G0928 Tripterygium wilfordii HOM05D005566 ORTHO05D007534 1.3e-22 112.5 262 32.1
CSS0022681 Camellia sinensis var. sinensis HOM05D005566 ORTHO05D007534 1.7e-22 112.1 178 38.2
Cc08_g14350 Coffea canephora HOM05D005566 ORTHO05D007534 1.7e-22 112.1 522 24.9
ECA233G6007 Erigeron canadensis HOM05D005566 ORTHO05D007534 1.7e-22 112.1 189 37.6
CiPaw.12G095300 Carya illinoinensis HOM05D005566 ORTHO05D007534 2.2e-22 111.7 275 31.3
Lsat_1_v5_gn_3_7621 Lactuca sativa HOM05D005566 ORTHO05D007534 2.2e-22 111.7 317 30.0
Oeu049553.1 Olea europaea HOM05D005566 ORTHO05D007534 2.2e-22 111.7 175 40.0
HanXRQChr02g0048911 Helianthus annuus HOM05D005566 ORTHO05D007534 3.8e-22 110.9 175 36.6
Lj2A187T86 Lonicera japonica HOM05D005566 ORTHO05D007534 3.8e-22 110.9 230 36.5
Prupe.5G095700 Prunus persica HOM05D005566 ORTHO05D007534 3.8e-22 110.9 175 38.3
Lj4g0021136 Lotus japonicus HOM05D005566 ORTHO05D007534 4.9e-22 110.5 271 33.2
ATR0680G084 Amborella trichopoda HOM05D005566 ORTHO05D007534 6.4e-22 110.2 223 37.7
MSTRG.11999 Avicennia marina HOM05D005566 ORTHO05D007534 6.4e-22 110.2 263 31.9
CAN.G792.89 Capsicum annuum HOM05D005566 ORTHO05D007534 6.4e-22 110.2 181 38.1
Aa31LG1G1950 Aethionema arabicum HOM05D005566 ORTHO05D007534 1.1e-21 109.4 282 31.2
BcaC05g25112 Brassica carinata HOM05D005566 ORTHO05D007534 1.4e-21 109.0 272 29.4
CDE08G0014 Ceratophyllum demersum HOM05D005566 ORTHO05D007534 1.4e-21 109.0 314 30.6
AUR62010607 Chenopodium quinoa HOM05D005566 ORTHO05D007534 1.4e-21 109.0 275 32.0
AUR62017248 Chenopodium quinoa HOM05D005566 ORTHO05D007534 1.4e-21 109.0 253 33.6
DCAR_004649 Daucus carota HOM05D005566 ORTHO05D007534 1.4e-21 109.0 251 33.9
Ah.12g057290 Amaranthus hybridus HOM05D005566 ORTHO05D007534 2.4e-21 108.2 180 36.1
EL10Ac5g12770 Beta vulgaris HOM05D005566 ORTHO05D007534 2.4e-21 108.2 230 33.0
ECA246G0114 Erigeron canadensis HOM05D005566 ORTHO05D007534 2.4e-21 108.2 176 38.6
Haze_08893 Corylus avellana HOM05D005566 ORTHO05D007534 4.2e-21 107.5 177 39.0
DCAR_008409 Daucus carota HOM05D005566 ORTHO05D007534 4.2e-21 107.5 179 36.3
Nitab4.5_0001200g0190 Nicotiana tabacum HOM05D005566 ORTHO05D007534 4.2e-21 107.5 309 31.7
Potri.003G124200 Populus trichocarpa HOM05D005566 ORTHO05D007534 4.2e-21 107.5 275 31.6
Ciclev10024399m.g Citrus clementina HOM05D005566 ORTHO05D007534 7.1e-21 106.7 174 37.4
COL.COLO4_34426 Corchorus olitorius HOM05D005566 ORTHO05D007534 7.1e-21 106.7 284 31.0
Duzib084G0536 Durio zibethinus HOM05D005566 ORTHO05D007534 7.1e-21 106.7 177 39.0
QL12p018066 Quercus lobata HOM05D005566 ORTHO05D007534 7.1e-21 106.7 273 32.6
Cpa.g.sc76.21 Carica papaya HOM05D005566 ORTHO05D007534 9.3e-21 106.3 171 39.2
Cfa012142 Carpinus fangiana HOM05D005566 ORTHO05D007534 9.3e-21 106.3 177 40.1
SalBow5G3774 Salvia bowleyana HOM05D005566 ORTHO05D007534 1.2e-20 105.9 292 32.9
Sed0016580 Sechium edule HOM05D005566 ORTHO05D007534 1.2e-20 105.9 251 31.9
CsaV3_5G003020 Cucumis sativus L. HOM05D005566 ORTHO05D007534 1.6e-20 105.5 362 29.0
HanXRQChr06g0165791 Helianthus annuus HOM05D005566 ORTHO05D007534 1.6e-20 105.5 180 36.1
unitig_744.g24358 Utricularia gibba HOM05D005566 ORTHO05D007534 1.6e-20 105.5 187 35.8
CARHR013110 Cardamine hirsuta HOM05D005566 ORTHO05D007534 2.1e-20 105.1 291 28.5
Eucgr.D01874 Eucalyptus grandis HOM05D005566 ORTHO05D007534 2.1e-20 105.1 202 38.1
Gohir.D12G229000 Gossypium hirsutum HOM05D005566 ORTHO05D007534 2.1e-20 105.1 285 32.6
Medtr8g097290 Medicago truncatula HOM05D005566 ORTHO05D007534 2.1e-20 105.1 270 30.0
Actinidia14546 Actinidia chinensis HOM05D005566 ORTHO05D007534 3.5e-20 104.4 173 37.6
AT1G12800 Arabidopsis thaliana HOM05D005566 ORTHO05D007534 4.6e-20 104.0 260 29.2
Actinidia27393 Actinidia chinensis HOM05D005566 ORTHO05D007534 6.0e-20 103.6 178 35.4
AL1G24430 Arabidopsis lyrata HOM05D005566 ORTHO05D007534 6.0e-20 103.6 247 29.6
TPR.G12738 Trifolium pratense HOM05D005566 ORTHO05D007534 7.9e-20 103.2 184 35.3
Gohir.A12G226600 Gossypium hirsutum HOM05D005566 ORTHO05D007534 1.0e-19 102.8 219 34.7
Atru.chr9.204 Acer truncatum HOM05D005566 ORTHO05D007534 1.3e-19 102.4 426 27.9
BraA06t24082Z Brassica rapa HOM05D005566 ORTHO05D007534 1.3e-19 102.4 274 28.8
Migut.A00792 Erythranthe guttata HOM05D005566 ORTHO05D007534 1.3e-19 102.4 290 31.4
Actinidia02022 Actinidia chinensis HOM05D005566 ORTHO05D007534 1.8e-19 102.1 258 30.6
Sp1g11360 Schrenkiella parvula HOM05D005566 ORTHO05D007534 1.8e-19 102.1 260 29.6
BcaC05g25155 Brassica carinata HOM05D005566 ORTHO05D007534 2.3e-19 101.7 272 28.3
A06p08880 Brassica napus HOM05D005566 ORTHO05D007534 2.3e-19 101.7 271 29.2
Gorai.008G245200 Gossypium raimondii HOM05D005566 ORTHO05D007534 2.3e-19 101.7 285 31.6
Manes.02G024200 Manihot esculenta HOM05D005566 ORTHO05D007534 2.3e-19 101.7 310 30.6
vmacro11305 Vaccinium macrocarpon HOM05D005566 ORTHO05D007534 2.3e-19 101.7 175 35.4
ClCG01G002940 Citrullus lanatus HOM05D005566 ORTHO05D007534 3.0e-19 101.3 431 26.0
Thecc.03G275300 Theobroma cacao HOM05D005566 ORTHO05D007534 3.0e-19 101.3 224 34.8
Carub.0001s1252 Capsella rubella HOM05D005566 ORTHO05D007534 3.9e-19 100.9 258 29.5
Sabra03G0087800 Salix brachista HOM05D005566 ORTHO05D007534 3.9e-19 100.9 275 30.5
Rhsim02G0223600 Rhododendron simsii HOM05D005566 ORTHO05D007534 5.1e-19 100.5 257 30.0
Duzib205G0430 Durio zibethinus HOM05D005566 ORTHO05D007534 6.7e-19 100.1 271 32.5
SGA_v2.0_scaffold253G45116 Striga asiatica HOM05D005566 ORTHO05D007534 1.1e-18 99.4 267 32.6
C05p10500 Brassica napus HOM05D005566 ORTHO05D007534 1.9e-18 98.6 179 33.0
BolC5t29796H Brassica oleracea HOM05D005566 ORTHO05D007534 1.9e-18 98.6 179 33.0
AL1G24290 Arabidopsis lyrata HOM05D005566 ORTHO05D007534 2.5e-18 98.2 237 28.3
CDE05G3632 Ceratophyllum demersum HOM05D005566 ORTHO05D007534 5.6e-18 97.1 446 25.8
THA.LOC104809401 Tarenaya hassleriana HOM05D005566 ORTHO05D007534 5.6e-18 97.1 173 35.8
Thhalv10006889m.g Eutrema salsugineum HOM05D005566 ORTHO05D007534 1.3e-17 95.9 271 27.7
HPP92_014800 Vanilla planifolia HOM05D005566 ORTHO05D007534 2.8e-17 94.7 183 32.2
MD14G1098600 Malus domestica HOM05D005566 ORTHO05D007534 8.1e-17 93.2 148 37.8
Ca_17550_v3 Cicer arietinum L. HOM05D005566 ORTHO05D007534 5.3e-16 90.5 186 34.9
MELO3C005651.2 Cucumis melo HOM05D005566 ORTHO05D007534 2.0e-15 88.6 353 28.6
arahy.Tifrunner.gnm1.ann1.H32RIC Arachis hypogaea HOM05D005566 ORTHO05D007534 7.6e-15 86.7 144 38.9
Hund11490 Selenicereus undatus HOM05D005566 ORTHO05D007534 1.7e-14 85.5 214 31.3
arahy.Tifrunner.gnm1.ann1.8RU08H Arachis hypogaea HOM05D005566 ORTHO05D007534 3.8e-14 84.3 144 36.1
THA.LOC104809657 Tarenaya hassleriana HOM05D005566 ORTHO05D007534 1.1e-13 82.8 249 29.3
Mapoly0023s0130 Marchantia polymorpha HOM05D005566 ORTHO05D007534 1.6e-12 79.0 207 31.4
AagrBONN_evm.TU.Sc2ySwM_117.842 Anthoceros agrestis HOM05D005566 ORTHO05D007534 8.2e-09 66.6 205 29.3
Glyma.06G293800 Glycine max HOM05D005566 ORTHO05D007534 3.1e-08 64.7 74 45.9
arahy.Tifrunner.gnm1.ann1.SR6UK4 Arachis hypogaea HOM05D005566 ORTHO05D007534 4.0e-08 64.3 131 32.8


User provided reference genes

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