Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26598 Sequoiadendron giganteum HOM05D005948 ORTHO05D007689 6.4e-75 283.9 132 100.0
MBI04_g35669_MAGBIO Magnolia biondii HOM05D005948 ORTHO05D007689 1.4e-53 213.0 130 70.8
PSO063G6398 Papaver somniferum HOM05D005948 ORTHO05D007689 7.9e-49 197.2 132 63.6
Nitab4.5_0000072g0570 Nicotiana tabacum HOM05D005948 ORTHO05D007689 8.7e-48 193.7 131 62.6
Nitab4.5_0001548g0060 Nicotiana tabacum HOM05D005948 ORTHO05D007689 1.5e-47 193.0 131 61.8
ATR0115G032 Amborella trichopoda HOM05D005948 ORTHO05D007689 1.9e-47 192.6 131 64.1
Lj8C39T8 Lonicera japonica HOM05D005948 ORTHO05D007689 1.9e-47 192.6 131 63.4
Nn4g26350 Nelumbo nucifera HOM05D005948 ORTHO05D007689 2.5e-47 192.2 131 64.9
PGSC0003DMG402023000 Solanum tuberosum HOM05D005948 ORTHO05D007689 2.5e-47 192.2 131 62.6
TAR375G0868 Trochodendron aralioides HOM05D005948 ORTHO05D007689 3.3e-47 191.8 131 65.6
GSVIVG01018568001 Vitis vinifera HOM05D005948 ORTHO05D007689 5.6e-47 191.0 131 66.4
Sopen03g023390 Solanum pennellii HOM05D005948 ORTHO05D007689 1.3e-46 189.9 131 61.8
Aa31LG3G7950 Aethionema arabicum HOM05D005948 ORTHO05D007689 1.6e-46 189.5 131 64.1
QL09p019069 Quercus lobata HOM05D005948 ORTHO05D007689 1.6e-46 189.5 131 63.4
CAN.G152.16 Capsicum annuum HOM05D005948 ORTHO05D007689 2.8e-46 188.7 131 60.3
Solyc03g083580.3 Solanum lycopersicum HOM05D005948 ORTHO05D007689 2.8e-46 188.7 131 61.8
Mapoly0001s0567 Marchantia polymorpha HOM05D005948 ORTHO05D007689 8.2e-46 187.2 131 64.1
CiPaw.04G061500 Carya illinoinensis HOM05D005948 ORTHO05D007689 9.0e-45 183.7 131 61.1
Eucgr.K00152 Eucalyptus grandis HOM05D005948 ORTHO05D007689 9.0e-45 183.7 131 61.8
Aqoxy5G03938 Aquilegia oxysepala HOM05D005948 ORTHO05D007689 2.0e-44 182.6 131 60.3
Cpa.g.sc3.294 Carica papaya HOM05D005948 ORTHO05D007689 2.6e-44 182.2 131 61.1
HPP92_003264 Vanilla planifolia HOM05D005948 ORTHO05D007689 2.6e-44 182.2 131 62.6
HPP92_003266 Vanilla planifolia HOM05D005948 ORTHO05D007689 2.6e-44 182.2 131 62.6
AagrBONN_evm.TU.Sc2ySwM_228.3357 Anthoceros agrestis HOM05D005948 ORTHO05D007689 5.8e-44 181.0 132 59.1
Cc02_g04060 Coffea canephora HOM05D005948 ORTHO05D007689 5.8e-44 181.0 131 61.1
Pp3c16_10250 Physcomitrium patens HOM05D005948 ORTHO05D007689 5.8e-44 181.0 131 62.6
arahy.Tifrunner.gnm1.ann1.1LKT55 Arachis hypogaea HOM05D005948 ORTHO05D007689 7.6e-44 180.6 131 59.5
CARHR264310 Cardamine hirsuta HOM05D005948 ORTHO05D007689 7.6e-44 180.6 131 61.1
arahy.Tifrunner.gnm1.ann1.UP65TY Arachis hypogaea HOM05D005948 ORTHO05D007689 1.0e-43 180.3 131 59.5
Rhsim03G0169500 Rhododendron simsii HOM05D005948 ORTHO05D007689 1.0e-43 180.3 131 61.1
CDE02G2841 Ceratophyllum demersum HOM05D005948 ORTHO05D007689 1.3e-43 179.9 111 67.6
HanXRQChr08g0223861 Helianthus annuus HOM05D005948 ORTHO05D007689 1.3e-43 179.9 130 60.0
Ciclev10004402m.g Citrus clementina HOM05D005948 ORTHO05D007689 2.2e-43 179.1 131 57.3
Carub.0008s1157 Capsella rubella HOM05D005948 ORTHO05D007689 2.9e-43 178.7 132 60.6
PGR142G1204 Punica granatum HOM05D005948 ORTHO05D007689 2.9e-43 178.7 130 60.8
BcaC01g06127 Brassica carinata HOM05D005948 ORTHO05D007689 6.5e-43 177.6 132 60.6
C03p18990 Brassica napus HOM05D005948 ORTHO05D007689 6.5e-43 177.6 132 60.6
BolC3t14288H Brassica oleracea HOM05D005948 ORTHO05D007689 6.5e-43 177.6 132 60.6
BraA03t10903Z Brassica rapa HOM05D005948 ORTHO05D007689 6.5e-43 177.6 132 60.6
Manes.14G034200 Manihot esculenta HOM05D005948 ORTHO05D007689 6.5e-43 177.6 131 59.5
Sed0017785 Sechium edule HOM05D005948 ORTHO05D007689 6.5e-43 177.6 130 58.5
TWI23G0886 Tripterygium wilfordii HOM05D005948 ORTHO05D007689 6.5e-43 177.6 131 59.5
AL8G25840 Arabidopsis lyrata HOM05D005948 ORTHO05D007689 1.1e-42 176.8 132 60.6
A03p16120 Brassica napus HOM05D005948 ORTHO05D007689 1.4e-42 176.4 132 59.8
Sc19g0001930 Simmondsia chinensis HOM05D005948 ORTHO05D007689 1.9e-42 176.0 131 62.6
Os06g0686500 Oryza sativa ssp. japonica HOM05D005948 ORTHO05D007689 2.5e-42 175.6 132 59.8
Sp6g13730 Schrenkiella parvula HOM05D005948 ORTHO05D007689 2.5e-42 175.6 132 60.6
AT5G51540 Arabidopsis thaliana HOM05D005948 ORTHO05D007689 5.5e-42 174.5 132 59.8
Thhalv10012823m.g Eutrema salsugineum HOM05D005948 ORTHO05D007689 7.1e-42 174.1 132 59.8
Oeu021716.2 Olea europaea HOM05D005948 ORTHO05D007689 7.1e-42 174.1 132 58.3
AUR62016181 Chenopodium quinoa HOM05D005948 ORTHO05D007689 2.1e-41 172.6 131 59.5
Prupe.2G280500 Prunus persica HOM05D005948 ORTHO05D007689 2.1e-41 172.6 131 60.3
AUR62035100 Chenopodium quinoa HOM05D005948 ORTHO05D007689 2.7e-41 172.2 131 59.5
THA.LOC104811515 Tarenaya hassleriana HOM05D005948 ORTHO05D007689 2.7e-41 172.2 134 59.7
MD07G1256400 Malus domestica HOM05D005948 ORTHO05D007689 3.5e-41 171.8 130 59.2
Migut.F00455 Erythranthe guttata HOM05D005948 ORTHO05D007689 4.6e-41 171.4 131 59.5
Lj3g0024133 Lotus japonicus HOM05D005948 ORTHO05D007689 6.0e-41 171.0 132 56.1
Ah.07g208040 Amaranthus hybridus HOM05D005948 ORTHO05D007689 7.9e-41 170.6 131 58.8
EL10Ac3g05815 Beta vulgaris HOM05D005948 ORTHO05D007689 7.9e-41 170.6 131 59.5
Potri.015G129300 Populus trichocarpa HOM05D005948 ORTHO05D007689 7.9e-41 170.6 131 57.3
SMO172G0186 Selaginella moellendorffii HOM05D005948 ORTHO05D007689 7.9e-41 170.6 132 55.3
Hund11806 Selenicereus undatus HOM05D005948 ORTHO05D007689 7.9e-41 170.6 131 58.8
BcaB01g04169 Brassica carinata HOM05D005948 ORTHO05D007689 1.0e-40 170.2 132 58.3
CsaV3_3G016260 Cucumis sativus L. HOM05D005948 ORTHO05D007689 1.8e-40 169.5 131 57.3
FAN03G1032 Fragaria x ananassa HOM05D005948 ORTHO05D007689 1.8e-40 169.5 128 59.4
SGA_v2.0_scaffold543G52820 Striga asiatica HOM05D005948 ORTHO05D007689 1.8e-40 169.5 131 55.7
Zm00001eb225650 Zea mays HOM05D005948 ORTHO05D007689 2.3e-40 169.1 132 56.8
Haze_13840 Corylus avellana HOM05D005948 ORTHO05D007689 3.0e-40 168.7 111 65.8
MELO3C006824.2 Cucumis melo HOM05D005948 ORTHO05D007689 3.0e-40 168.7 131 57.3
FvH4_7g27930 Fragaria vesca HOM05D005948 ORTHO05D007689 3.0e-40 168.7 128 59.4
FAN06G0529 Fragaria x ananassa HOM05D005948 ORTHO05D007689 3.9e-40 168.3 128 59.4
FAN06G2156 Fragaria x ananassa HOM05D005948 ORTHO05D007689 3.9e-40 168.3 128 59.4
RcHm_v2.0_Chr1g0374891 Rosa chinensis HOM05D005948 ORTHO05D007689 3.9e-40 168.3 128 59.4
Glyma.04G117400 Glycine max HOM05D005948 ORTHO05D007689 5.1e-40 167.9 131 57.3
Lalb_Chr18g0048781 Lupinus albus HOM05D005948 ORTHO05D007689 6.7e-40 167.5 131 57.3
Cfa008218 Carpinus fangiana HOM05D005948 ORTHO05D007689 8.7e-40 167.2 108 66.7
MD17G1037100 Malus domestica HOM05D005948 ORTHO05D007689 1.1e-39 166.8 136 57.4
VMungo1080G1058 Vigna mungo HOM05D005948 ORTHO05D007689 1.5e-39 166.4 131 56.5
DCAR_018091 Daucus carota HOM05D005948 ORTHO05D007689 1.9e-39 166.0 131 55.7
Phvul.005G006700 Phaseolus vulgaris HOM05D005948 ORTHO05D007689 2.5e-39 165.6 131 55.7
Ca_14119_v3 Cicer arietinum L. HOM05D005948 ORTHO05D007689 5.7e-39 164.5 131 55.0
FAN10G0255 Fragaria x ananassa HOM05D005948 ORTHO05D007689 5.7e-39 164.5 128 58.6
Psat5g230800 Pisum sativum HOM05D005948 ORTHO05D007689 2.8e-38 162.2 129 55.8
vmacro06779 Vaccinium macrocarpon HOM05D005948 ORTHO05D007689 4.8e-38 161.4 164 48.8
Gohir.D11G010266 Gossypium hirsutum HOM05D005948 ORTHO05D007689 8.2e-38 160.6 131 55.0
Medtr3g009160 Medicago truncatula HOM05D005948 ORTHO05D007689 8.2e-38 160.6 131 53.4
Gohir.A11G007600 Gossypium hirsutum HOM05D005948 ORTHO05D007689 1.4e-37 159.8 131 54.2
Gorai.007G008100 Gossypium raimondii HOM05D005948 ORTHO05D007689 1.4e-37 159.8 131 54.2
ECA233G5295 Erigeron canadensis HOM05D005948 ORTHO05D007689 1.8e-37 159.5 120 57.5
ClCG05G007440 Citrullus lanatus HOM05D005948 ORTHO05D007689 6.9e-37 157.5 153 49.7
Lsat_1_v5_gn_8_9260 Lactuca sativa HOM05D005948 ORTHO05D007689 6.9e-37 157.5 117 55.6
unitig_46.g18766 Utricularia gibba HOM05D005948 ORTHO05D007689 2.6e-36 155.6 131 56.5
COL.COLO4_14151 Corchorus olitorius HOM05D005948 ORTHO05D007689 1.0e-35 153.7 131 52.7
Thecc.03G158700 Theobroma cacao HOM05D005948 ORTHO05D007689 1.7e-35 152.9 131 51.9
SalBow4G1780 Salvia bowleyana HOM05D005948 ORTHO05D007689 4.6e-33 144.8 131 51.1
Actinidia25023 Actinidia chinensis HOM05D005948 ORTHO05D007689 6.7e-32 141.0 81 74.1
Lj3g0024543 Lotus japonicus HOM05D005948 ORTHO05D007689 6.7e-24 114.4 125 47.2
MCO13G480 Micromonas commoda HOM05D005948 ORTHO05D007689 1.4e-18 96.7 95 47.4
Lsat_1_v5_gn_1_115820 Lactuca sativa HOM05D005112 ORTHO05D036434 1.8e-16 89.7 67 55.2
Lsat_1_v5_gn_9_95981 Lactuca sativa HOM05D005112 ORTHO05D036434 5.2e-16 88.2 66 54.5
Lsat_1_v5_gn_8_46020 Lactuca sativa HOM05D001849 ORTHO05D004689 6.3e-14 81.3 51 64.7
Lsat_1_v5_gn_7_30101 Lactuca sativa HOM05D001259 ORTHO05D001103 5.3e-13 78.2 64 51.6
Lsat_1_v5_gn_3_137840 Lactuca sativa HOM05D005112 ORTHO05D036434 9.1e-13 77.4 63 52.4
PRCOL_00002209 Prasinoderma coloniale HOM05D005948 ORTHO05D007689 2.5e-10 69.3 116 35.3
Cre02.g073400 Chlamydomonas reinhardtii HOM05D005948 ORTHO05D007689 1.0e-08 63.9 113 36.3
Lsat_1_v5_gn_4_185241 Lactuca sativa HOM05D002765 ORTHO05D001313 2.0e-07 59.7 39 59.0
TWI31G0352 Tripterygium wilfordii HOM05D005948 ORTHO05D007689 5.7e-07 58.2 36 61.1
Cfa025771 Carpinus fangiana HOM05D001304 ORTHO05D007689 3.7e-06 55.5 106 32.1
Lsat_1_v5_gn_7_52500 Lactuca sativa HOM05D001849 ORTHO05D004689 3.7e-06 55.5 57 42.1


User provided reference genes

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