Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26592 Sequoiadendron giganteum HOM05D001969 ORTHO05D009003 8.1e-63 243.8 145 100.0
RcHm_v2.0_Chr2g0127151 Rosa chinensis HOM05D001969 ORTHO05D009003 9.0e-30 134.0 132 53.8
DCAR_011200 Daucus carota HOM05D001969 ORTHO05D009003 4.5e-29 131.7 139 44.6
Nn1g03931 Nelumbo nucifera HOM05D001969 ORTHO05D009003 1.7e-28 129.8 131 63.4
Nn1g06730 Nelumbo nucifera HOM05D001969 ORTHO05D009003 1.7e-28 129.8 130 54.6
Lsat_1_v5_gn_3_137700 Lactuca sativa HOM05D001969 ORTHO05D009003 8.4e-28 127.5 131 52.7
TAR629G1647 Trochodendron aralioides HOM05D001969 ORTHO05D009003 1.9e-27 126.3 129 62.0
TAR627G0582 Trochodendron aralioides HOM05D001969 ORTHO05D009003 3.2e-27 125.6 140 56.4
ECA236G1367 Erigeron canadensis HOM05D001969 ORTHO05D009003 4.2e-27 125.2 130 59.2
Peaxi162Scf00423g00066 Petunia axillaris HOM05D001969 ORTHO05D009003 4.2e-27 125.2 133 61.7
Thecc.02G172900 Theobroma cacao HOM05D001969 ORTHO05D009003 4.2e-27 125.2 134 59.7
CANSAT78G0375 Cannabis sativa HOM05D001969 ORTHO05D003463 5.5e-27 124.8 131 58.0
ECA233G3782 Erigeron canadensis HOM05D001969 ORTHO05D009003 5.5e-27 124.8 130 58.5
TAR627G0343 Trochodendron aralioides HOM05D001969 ORTHO05D009003 9.3e-27 124.0 131 59.5
Potri.013G145800 Populus trichocarpa HOM05D001969 ORTHO05D009003 3.5e-26 122.1 144 54.9
Cc11_g01780 Coffea canephora HOM05D001969 ORTHO05D009003 4.6e-26 121.7 140 57.1
QL08p048209 Quercus lobata HOM05D001969 ORTHO05D009003 4.6e-26 121.7 136 56.6
Aqoxy6G02660 Aquilegia oxysepala HOM05D001969 ORTHO05D009003 6.0e-26 121.3 133 60.9
Cfa003704 Carpinus fangiana HOM05D001969 ORTHO05D009003 6.0e-26 121.3 128 60.9
Ciclev10017445m.g Citrus clementina HOM05D001969 ORTHO05D003463 6.0e-26 121.3 138 49.3
Cc11_g01770 Coffea canephora HOM05D001969 ORTHO05D009003 6.0e-26 121.3 133 58.6
Duzib248G0251 Durio zibethinus HOM05D001969 ORTHO05D009003 1.0e-25 120.6 134 59.0
Atru.chr6.3054 Acer truncatum HOM05D001969 ORTHO05D009003 1.3e-25 120.2 142 53.5
vmacro09267 Vaccinium macrocarpon HOM05D001969 ORTHO05D009003 1.8e-25 119.8 137 56.2
HanXRQChr09g0274351 Helianthus annuus HOM05D001969 ORTHO05D009003 2.3e-25 119.4 130 58.5
MBI06_g08467_MAGBIO Magnolia biondii HOM05D001969 ORTHO05D009003 2.3e-25 119.4 136 55.1
Nitab4.5_0003358g0010 Nicotiana tabacum HOM05D001969 ORTHO05D009003 2.3e-25 119.4 133 61.7
Solyc07g064840.3 Solanum lycopersicum HOM05D001969 ORTHO05D009003 2.3e-25 119.4 137 61.3
HanXRQChr11g0350221 Helianthus annuus HOM05D001969 ORTHO05D009003 3.0e-25 119.0 130 58.5
Nitab4.5_0002260g0270 Nicotiana tabacum HOM05D001969 ORTHO05D009003 3.0e-25 119.0 133 60.9
SGA_v2.0_scaffold3G01553 Striga asiatica HOM05D001969 ORTHO05D009003 3.0e-25 119.0 132 54.5
MBI04_g38761_MAGBIO Magnolia biondii HOM05D001969 ORTHO05D009003 3.9e-25 118.6 134 56.7
Sopen07g033040 Solanum pennellii HOM05D001969 ORTHO05D009003 3.9e-25 118.6 137 60.6
ATR1001G005 Amborella trichopoda HOM05D001969 ORTHO05D009003 5.1e-25 118.2 129 54.3
Gohir.D02G182700 Gossypium hirsutum HOM05D001969 ORTHO05D009003 6.7e-25 117.9 134 58.2
PGSC0003DMG400022306 Solanum tuberosum HOM05D001969 ORTHO05D009003 6.7e-25 117.9 137 60.6
CANSAT21G1059 Cannabis sativa HOM05D001969 ORTHO05D009003 8.7e-25 117.5 130 56.2
TWI18G1087 Tripterygium wilfordii HOM05D001969 ORTHO05D009003 8.7e-25 117.5 134 49.3
Migut.H00150 Erythranthe guttata HOM05D001969 ORTHO05D009003 1.1e-24 117.1 135 54.8
SalBow1G0343 Salvia bowleyana HOM05D001969 ORTHO05D009003 1.5e-24 116.7 132 55.3
SalBow7G2523 Salvia bowleyana HOM05D001969 ORTHO05D009003 1.5e-24 116.7 132 55.3
SalBow7G4035 Salvia bowleyana HOM05D001969 ORTHO05D009003 1.5e-24 116.7 132 55.3
SGA_v2.0_scaffold135G34841 Striga asiatica HOM05D001969 ORTHO05D009003 1.5e-24 116.7 132 53.8
CAN.G1310.15 Capsicum annuum HOM05D001969 ORTHO05D009003 2.5e-24 115.9 130 60.8
Nitab4.5_0006575g0040 Nicotiana tabacum HOM05D001969 ORTHO05D009003 2.5e-24 115.9 135 56.3
Gohir.A03G159600 Gossypium hirsutum HOM05D001969 ORTHO05D009003 3.3e-24 115.5 134 57.5
HanXRQChr06g0167021 Helianthus annuus HOM05D001969 ORTHO05D009003 3.3e-24 115.5 130 57.7
COL.COLO4_13690 Corchorus olitorius HOM05D001969 ORTHO05D009003 4.3e-24 115.2 134 56.7
SEGI_19463 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 4.3e-24 115.2 104 68.3
Lsat_1_v5_gn_2_3941 Lactuca sativa HOM05D001969 ORTHO05D009003 9.6e-24 114.0 135 42.2
Nitab4.5_0003069g0040 Nicotiana tabacum HOM05D001969 ORTHO05D009003 9.6e-24 114.0 135 56.3
MSTRG.23988 Avicennia marina HOM05D001969 ORTHO05D009003 1.3e-23 113.6 129 56.6
CDE04G1317 Ceratophyllum demersum HOM05D004539 ORTHO05D009003 1.3e-23 113.6 122 61.5
Manes.13G150950 Manihot esculenta HOM05D001969 ORTHO05D009003 2.1e-23 112.8 104 51.0
Oeu047331.1 Olea europaea HOM05D001969 ORTHO05D009003 2.1e-23 112.8 131 58.0
CSS0025708 Camellia sinensis var. sinensis HOM05D001969 ORTHO05D009003 2.8e-23 112.5 135 51.9
AUR62029451 Chenopodium quinoa HOM05D001969 ORTHO05D009003 4.8e-23 111.7 131 53.4
Glyma.09G257600 Glycine max HOM05D001969 ORTHO05D009003 4.8e-23 111.7 130 56.2
MD09G1092600 Malus domestica HOM05D001969 ORTHO05D009003 6.2e-23 111.3 128 57.8
Sed0009336 Sechium edule HOM05D001969 ORTHO05D009003 8.2e-23 110.9 129 55.8
VMungo1127G0255 Vigna mungo HOM05D001969 ORTHO05D009003 8.2e-23 110.9 130 55.4
Haze_15783 Corylus avellana HOM05D001969 ORTHO05D009003 1.8e-22 109.8 116 62.1
Lalb_Chr19g0135421 Lupinus albus HOM05D001969 ORTHO05D009003 1.8e-22 109.8 130 54.6
EL10Ac3g05654 Beta vulgaris HOM05D001969 ORTHO05D003463 3.1e-22 109.0 137 56.2
Dinv23700 Davidia involucrata HOM05D001969 ORTHO05D009003 3.1e-22 109.0 131 51.1
Rhsim04G0021700 Rhododendron simsii HOM05D001969 ORTHO05D009003 3.1e-22 109.0 132 53.8
TPR.G21647 Trifolium pratense HOM05D001969 ORTHO05D009003 6.9e-22 107.8 136 52.9
CAN.G1720.5 Capsicum annuum HOM05D001969 ORTHO05D009003 1.2e-21 107.1 140 55.0
MD17G1082700 Malus domestica HOM05D001969 ORTHO05D009003 1.2e-21 107.1 129 56.6
Phvul.011G177800 Phaseolus vulgaris HOM05D001969 ORTHO05D009003 1.2e-21 107.1 130 53.1
Glyma.18G235000 Glycine max HOM05D001969 ORTHO05D009003 1.5e-21 106.7 130 54.6
THA.LOC104811178 Tarenaya hassleriana HOM05D001969 ORTHO05D009003 2.0e-21 106.3 139 36.0
CiPaw.16G086600 Carya illinoinensis HOM05D001969 ORTHO05D009003 2.6e-21 105.9 128 57.0
Lju41E32T0 Lonicera japonica HOM05D001969 ORTHO05D009003 2.6e-21 105.9 81 54.3
FAN05G0495 Fragaria x ananassa HOM05D001969 ORTHO05D003463 3.4e-21 105.5 82 51.2
unitig_748.g8143 Utricularia gibba HOM05D001969 ORTHO05D009003 4.5e-21 105.1 126 55.6
GSVIVG01030575001 Vitis vinifera HOM05D001969 ORTHO05D009003 4.5e-21 105.1 126 54.8
Actinidia39674 Actinidia chinensis HOM05D001969 ORTHO05D003463 5.8e-21 104.8 132 49.2
Actinidia39300 Actinidia chinensis HOM05D001969 ORTHO05D009003 7.6e-21 104.4 132 53.8
Mapoly0071s0092 Marchantia polymorpha HOM05D001969 ORTHO05D009003 7.6e-21 104.4 132 54.5
Sed0013701 Sechium edule HOM05D001969 ORTHO05D009003 7.6e-21 104.4 100 45.0
Gorai.005G205100 Gossypium raimondii HOM05D001969 ORTHO05D003463 1.0e-20 104.0 117 58.1
Psat7g197120 Pisum sativum HOM05D001969 ORTHO05D009003 1.3e-20 103.6 136 50.7
Medtr4g046043 Medicago truncatula HOM05D001969 ORTHO05D009003 1.7e-20 103.2 136 50.7
Ca_20693_v3 Cicer arietinum L. HOM05D001969 ORTHO05D009003 2.2e-20 102.8 136 50.0
Ca_30106_v3 Cicer arietinum L. HOM05D001969 ORTHO05D009003 2.2e-20 102.8 136 50.0
PGR142G0421 Punica granatum HOM05D001969 ORTHO05D003463 2.9e-20 102.4 123 56.1
Medtr4g065010 Medicago truncatula HOM05D001969 ORTHO05D009003 4.9e-20 101.7 136 50.7
Manes.06G013500 Manihot esculenta HOM05D001969 ORTHO05D009003 8.4e-20 100.9 116 42.2
Lj3g0006045 Lotus japonicus HOM05D001969 ORTHO05D009003 3.2e-19 99.0 132 48.5
SEGI_38009 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 3.2e-19 99.0 76 72.4
Zm00001eb194600 Zea mays HOM05D001969 ORTHO05D009003 3.2e-19 99.0 131 51.1
Zm00001eb225500 Zea mays HOM05D001969 ORTHO05D009003 3.2e-19 99.0 131 51.1
CsaV3_6G012510 Cucumis sativus L. HOM05D001969 ORTHO05D003463 4.2e-19 98.6 113 56.6
Zm00001eb072880 Zea mays HOM05D001969 ORTHO05D009003 4.2e-19 98.6 129 51.9
Zm00001eb414500 Zea mays HOM05D001969 ORTHO05D009003 4.2e-19 98.6 131 50.4
Sc03g0002190 Simmondsia chinensis HOM05D001969 ORTHO05D009003 5.5e-19 98.2 135 44.4
Zm00001eb194610 Zea mays HOM05D001969 ORTHO05D009003 7.1e-19 97.8 131 50.4
Zm00001eb350110 Zea mays HOM05D001969 ORTHO05D009003 1.2e-18 97.1 131 50.4
AL3G54010 Arabidopsis lyrata HOM05D001969 ORTHO05D009003 1.6e-18 96.7 138 43.5
Eucgr.K00935 Eucalyptus grandis HOM05D001969 ORTHO05D009003 1.6e-18 96.7 126 49.2
Aa31LG9G15650 Aethionema arabicum HOM05D001969 ORTHO05D009003 2.1e-18 96.3 139 33.1
HPP92_010084 Vanilla planifolia HOM05D001969 ORTHO05D009003 2.1e-18 96.3 134 50.0
HPP92_010093 Vanilla planifolia HOM05D001969 ORTHO05D009003 2.1e-18 96.3 134 50.0
Pp3c6_17280 Physcomitrium patens HOM05D001969 ORTHO05D009003 7.9e-18 94.4 132 49.2
Lj2g0006312 Lotus japonicus HOM05D001969 ORTHO05D009003 3.0e-17 92.4 132 47.0
TPR.G31971 Trifolium pratense HOM05D001669 ORTHO05D006496 1.1e-16 90.5 81 44.4
Os07g0530300 Oryza sativa ssp. japonica HOM05D001969 ORTHO05D009003 1.5e-16 90.1 131 48.9
Ah.07g207260 Amaranthus hybridus HOM05D001969 ORTHO05D003463 2.8e-15 85.9 118 45.8
PSO384G2148 Papaver somniferum HOM05D001969 ORTHO05D009003 8.2e-15 84.3 72 47.2
BcaC07g41194 Brassica carinata HOM05D001969 ORTHO05D003463 3.1e-14 82.4 134 32.8
C08p42010 Brassica napus HOM05D001969 ORTHO05D003463 3.1e-14 82.4 134 32.8
BolC8t51763H Brassica oleracea HOM05D001969 ORTHO05D003463 3.1e-14 82.4 134 32.8
PSO339G1404 Papaver somniferum HOM05D001969 ORTHO05D009003 4.1e-14 82.0 121 43.0
Rhsim04G0065900 Rhododendron simsii HOM05D001969 ORTHO05D003463 9.0e-14 80.9 101 58.4
Cpa.g.sc17.168 Carica papaya HOM05D001969 ORTHO05D003463 1.2e-13 80.5 121 46.3
FAN02G3777 Fragaria x ananassa HOM05D001969 ORTHO05D009003 1.2e-13 80.5 96 50.0
A09p58710 Brassica napus HOM05D001969 ORTHO05D003463 2.2e-12 76.3 132 29.5
BraA09t41257Z Brassica rapa HOM05D001969 ORTHO05D003463 2.2e-12 76.3 132 29.5
BcaB08g34941 Brassica carinata HOM05D001969 ORTHO05D003463 2.9e-12 75.9 116 31.0
Hma1.2p1_0832F.1_g225700 Hydrangea macrophylla HOM05D001969 ORTHO05D009003 2.9e-12 75.9 108 51.9
Aa31LG8G17650 Aethionema arabicum HOM05D001969 ORTHO05D003463 1.4e-11 73.6 97 33.0
SMO351G0323 Selaginella moellendorffii HOM05D001969 ORTHO05D009003 1.4e-11 73.6 129 41.9
Thhalv10001991m.g Eutrema salsugineum HOM05D001969 ORTHO05D003463 2.5e-11 72.8 117 30.8
Zm00001eb414510 Zea mays HOM05D001969 ORTHO05D009003 9.4e-11 70.9 63 50.8
PSO017G7338 Papaver somniferum HOM05D001969 ORTHO05D009003 1.6e-10 70.1 128 40.6
MCO02G305 Micromonas commoda HOM05D001969 ORTHO05D009003 2.0e-08 63.2 128 39.1
Eucgr.K00932 Eucalyptus grandis HOM05D001969 ORTHO05D009003 9.7e-08 60.8 57 42.1
PSO675G3991 Papaver somniferum HOM05D001969 ORTHO05D009003 3.7e-07 58.9 108 29.6
Cre02.g075550 Chlamydomonas reinhardtii HOM05D001969 ORTHO05D009003 8.2e-07 57.8 128 39.8
Hma1.2p1_0384F.1_g141150 Hydrangea macrophylla HOM05D001969 ORTHO05D009003 3.1e-06 55.8 73 35.6


User provided reference genes

Program Settings