Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26480 Sequoiadendron giganteum HOM05D006807 ORTHO05D008528 3.9e-41 171.0 85 100.0
TAR371G0294 Trochodendron aralioides HOM05D006807 ORTHO05D008528 2.2e-12 75.5 54 68.5
Gohir.D12G190500 Gossypium hirsutum HOM05D006807 ORTHO05D008528 2.9e-12 75.1 44 81.8
Sed0006468 Sechium edule HOM05D006807 ORTHO05D008528 2.9e-12 75.1 43 81.4
PSO170G3265 Papaver somniferum HOM05D006807 ORTHO05D008528 5.0e-12 74.3 44 81.8
Dinv11117 Davidia involucrata HOM05D006807 ORTHO05D008528 6.5e-12 73.9 44 79.5
Eucgr.B00162 Eucalyptus grandis HOM05D006807 ORTHO05D008528 6.5e-12 73.9 63 65.1
Gohir.A12G187500 Gossypium hirsutum HOM05D006807 ORTHO05D008528 6.5e-12 73.9 44 79.5
MD14G1165700 Malus domestica HOM05D006807 ORTHO05D008528 6.5e-12 73.9 44 79.5
Hund18532 Selenicereus undatus HOM05D006807 ORTHO05D008528 6.5e-12 73.9 76 56.6
Duzib205G0271 Durio zibethinus HOM05D006807 ORTHO05D008528 8.5e-12 73.6 44 81.8
QL10p005592 Quercus lobata HOM05D006807 ORTHO05D008528 8.5e-12 73.6 44 79.5
Sc22g0003890 Simmondsia chinensis HOM05D006807 ORTHO05D008528 8.5e-12 73.6 76 57.9
Thecc.03G121100 Theobroma cacao HOM05D006807 ORTHO05D008528 8.5e-12 73.6 76 57.9
ClCG03G003400 Citrullus lanatus HOM05D006807 ORTHO05D008528 1.1e-11 73.2 44 77.3
Gorai.008G204300 Gossypium raimondii HOM05D006807 ORTHO05D008528 1.1e-11 73.2 44 79.5
Manes.14G056000 Manihot esculenta HOM05D006807 ORTHO05D008528 1.1e-11 73.2 44 81.8
PSO063G3624 Papaver somniferum HOM05D006807 ORTHO05D008528 1.1e-11 73.2 44 81.8
Rhsim12G0171200 Rhododendron simsii HOM05D006807 ORTHO05D008528 1.1e-11 73.2 44 79.5
AUR62025746 Chenopodium quinoa HOM05D006807 ORTHO05D008528 1.4e-11 72.8 44 75.0
Aqoxy3G01322 Aquilegia oxysepala HOM05D006807 ORTHO05D008528 1.9e-11 72.4 44 77.3
Phvul.009G169800 Phaseolus vulgaris HOM05D006807 ORTHO05D008528 1.9e-11 72.4 44 75.0
Prupe.5G159400 Prunus persica HOM05D006807 ORTHO05D008528 1.9e-11 72.4 44 79.5
CANSAT80G1796 Cannabis sativa HOM05D006807 ORTHO05D008528 2.5e-11 72.0 44 77.3
Lj1g0024485 Lotus japonicus HOM05D006807 ORTHO05D008528 2.5e-11 72.0 44 77.3
EL10Ac7g18054 Beta vulgaris HOM05D006807 ORTHO05D008528 3.2e-11 71.6 76 52.6
ATR0824G221 Amborella trichopoda HOM05D006807 ORTHO05D008528 4.2e-11 71.2 54 63.0
CSS0019908 Camellia sinensis var. sinensis HOM05D006807 ORTHO05D008528 4.2e-11 71.2 44 75.0
COL.COLO4_04554 Corchorus olitorius HOM05D006807 ORTHO05D008528 4.2e-11 71.2 44 77.3
MELO3C002326.2 Cucumis melo HOM05D006807 ORTHO05D008528 4.2e-11 71.2 44 75.0
Lalb_Chr08g0236911 Lupinus albus HOM05D006807 ORTHO05D008528 4.2e-11 71.2 42 83.3
vmacro16698 Vaccinium macrocarpon HOM05D006807 ORTHO05D008528 5.5e-11 70.9 44 77.3
Glyma.04G191800 Glycine max HOM05D006807 ORTHO05D008528 7.2e-11 70.5 44 72.7
PGR083G0032 Punica granatum HOM05D006807 ORTHO05D008528 7.2e-11 70.5 44 79.5
FAN08G1325 Fragaria x ananassa HOM05D006807 ORTHO05D008528 9.4e-11 70.1 44 72.7
Hma1.2p1_0014F.1_g010010 Hydrangea macrophylla HOM05D006807 ORTHO05D008528 9.4e-11 70.1 44 77.3
Hma1.2p1_0014F.1_g010020 Hydrangea macrophylla HOM05D006807 ORTHO05D008528 9.4e-11 70.1 44 77.3
Potri.015G088900 Populus trichocarpa HOM05D006807 ORTHO05D008528 9.4e-11 70.1 44 75.0
VMungo1309G2613 Vigna mungo HOM05D006807 ORTHO05D008528 9.4e-11 70.1 44 70.5
CiPaw.11G013300 Carya illinoinensis HOM05D006807 ORTHO05D008528 1.2e-10 69.7 44 77.3
PSO017G6759 Papaver somniferum HOM05D006807 ORTHO05D008528 1.2e-10 69.7 44 79.5
PSO478G3056 Papaver somniferum HOM05D006807 ORTHO05D008528 1.2e-10 69.7 44 79.5
THA.LOC104821499 Tarenaya hassleriana HOM05D006807 ORTHO05D008528 1.2e-10 69.7 44 75.0
GSVIVG01007565001 Vitis vinifera HOM05D006807 ORTHO05D008528 1.6e-10 69.3 44 75.0
arahy.Tifrunner.gnm1.ann1.Q2B2KY Arachis hypogaea HOM05D006807 ORTHO05D008528 3.6e-10 68.2 44 72.7
arahy.Tifrunner.gnm1.ann1.X96BEI Arachis hypogaea HOM05D006807 ORTHO05D008528 3.6e-10 68.2 44 72.7
Cc04_g10630 Coffea canephora HOM05D006807 ORTHO05D008528 3.6e-10 68.2 44 75.0
RcHm_v2.0_Chr7g0191471 Rosa chinensis HOM05D006807 ORTHO05D008528 3.6e-10 68.2 44 72.7
Os12g0279600 Oryza sativa ssp. japonica HOM05D006807 ORTHO05D008528 6.1e-10 67.4 44 68.2
Peaxi162Scf00089g00837 Petunia axillaris HOM05D006807 ORTHO05D008528 6.1e-10 67.4 44 72.7
FvH4_5g07080 Fragaria vesca HOM05D006807 ORTHO05D008528 7.9e-10 67.0 44 70.5
FAN18G3349 Fragaria x ananassa HOM05D006807 ORTHO05D008528 7.9e-10 67.0 44 70.5
Haze_07288 Corylus avellana HOM05D006807 ORTHO05D008528 1.0e-09 66.6 44 72.7
Migut.I00265 Erythranthe guttata HOM05D006807 ORTHO05D008528 1.0e-09 66.6 44 70.5
TWI14G0970 Tripterygium wilfordii HOM05D006807 ORTHO05D008528 1.0e-09 66.6 44 70.5
Lj9A473T62 Lonicera japonica HOM05D006807 ORTHO05D008528 1.4e-09 66.2 44 72.7
SGA_v2.0_scaffold168G38478 Striga asiatica HOM05D006807 ORTHO05D008528 1.4e-09 66.2 44 68.2
A06p19250 Brassica napus HOM05D006807 ORTHO05D008528 1.8e-09 65.9 63 58.7
C08p23430 Brassica napus HOM05D006807 ORTHO05D008528 1.8e-09 65.9 44 72.7
BolC8t49971H Brassica oleracea HOM05D006807 ORTHO05D008528 1.8e-09 65.9 44 72.7
BraA06t25009Z Brassica rapa HOM05D006807 ORTHO05D008528 1.8e-09 65.9 63 58.7
FAN04G0573 Fragaria x ananassa HOM05D006807 ORTHO05D008528 2.3e-09 65.5 44 68.2
CDE02G3945 Ceratophyllum demersum HOM05D006807 ORTHO05D008528 3.0e-09 65.1 65 53.8
Nitab4.5_0001360g0080 Nicotiana tabacum HOM05D006807 ORTHO05D008528 3.0e-09 65.1 44 70.5
HPP92_021433 Vanilla planifolia HOM05D006807 ORTHO05D008528 3.9e-09 64.7 44 68.2
MSTRG.11302 Avicennia marina HOM05D006807 ORTHO05D008528 6.7e-09 63.9 44 65.9
Ciclev10020730m.g Citrus clementina HOM05D006807 ORTHO05D008528 6.7e-09 63.9 44 72.7
Solyc03g111600.4 Solanum lycopersicum HOM05D006807 ORTHO05D008528 6.7e-09 63.9 44 68.2
Sopen03g030720 Solanum pennellii HOM05D006807 ORTHO05D008528 6.7e-09 63.9 44 68.2
FAN13G3089 Fragaria x ananassa HOM05D006807 ORTHO05D008528 8.8e-09 63.5 44 68.2
unitig_32.g11163 Utricularia gibba HOM05D006807 ORTHO05D008528 8.8e-09 63.5 44 70.5
HPP92_027095 Vanilla planifolia HOM05D006807 ORTHO05D008528 8.8e-09 63.5 44 65.9
Nitab4.5_0002531g0140 Nicotiana tabacum HOM05D006807 ORTHO05D008528 1.5e-08 62.8 44 68.2
Atru.chr9.992 Acer truncatum HOM05D006807 ORTHO05D008528 2.5e-08 62.0 44 68.2
Medtr3g075220 Medicago truncatula HOM05D006807 ORTHO05D008528 3.3e-08 61.6 49 63.3
Thhalv10010480m.g Eutrema salsugineum HOM05D006807 ORTHO05D008528 5.7e-08 60.8 44 68.2
TPR.G38619 Trifolium pratense HOM05D006807 ORTHO05D008528 5.7e-08 60.8 48 64.6
AL5G27820 Arabidopsis lyrata HOM05D006807 ORTHO05D008528 1.7e-07 59.3 44 68.2
AT3G48425 Arabidopsis thaliana HOM05D006807 ORTHO05D008528 2.2e-07 58.9 44 68.2
Psat5g141120 Pisum sativum HOM05D006807 ORTHO05D008528 2.2e-07 58.9 48 62.5
BcaB01g00811 Brassica carinata HOM05D006807 ORTHO05D008528 3.7e-07 58.2 57 57.9
CARHR157170 Cardamine hirsuta HOM05D006807 ORTHO05D008528 3.7e-07 58.2 44 65.9
Sp5g13620 Schrenkiella parvula HOM05D006807 ORTHO05D008528 3.7e-07 58.2 63 55.6
Sabra15G0111700 Salix brachista HOM05D006807 ORTHO05D008528 6.3e-07 57.4 70 48.6
Pp3c24_19470 Physcomitrium patens HOM05D006807 ORTHO05D008528 1.4e-06 56.2 44 59.1
TAR374G0317 Trochodendron aralioides HOM05D006807 ORTHO05D008528 1.4e-06 56.2 38 68.4
Carub.0005s1459 Capsella rubella HOM05D006807 ORTHO05D008528 1.8e-06 55.8 44 65.9
HanXRQChr09g0272791 Helianthus annuus HOM05D006807 ORTHO05D008528 3.1e-06 55.1 44 61.4
Lsat_1_v5_gn_4_78300 Lactuca sativa HOM05D006807 ORTHO05D008528 5.3e-06 54.3 44 61.4
Aa31LG4G17000 Aethionema arabicum HOM05D006807 ORTHO05D008528 9.1e-06 53.5 42 64.3
ECA232G3921 Erigeron canadensis HOM05D005390 ORTHO05D007086 9.1e-06 53.5 44 59.1
SHI17323 Sapria himalayana HOM05D006807 ORTHO05D008528 9.1e-06 53.5 90 37.8


User provided reference genes

Program Settings