Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26169 Sequoiadendron giganteum HOM05D000212 ORTHO05D005509 4.0e-69 264.6 131 100.0
TAR381G1304 Trochodendron aralioides HOM05D000212 ORTHO05D005509 6.7e-24 114.4 61 88.5
Lj5C178T12 Lonicera japonica HOM05D000212 ORTHO05D005509 8.7e-24 114.0 61 85.2
Nn5g30798 Nelumbo nucifera HOM05D000212 ORTHO05D005509 1.5e-23 113.2 61 86.9
Dinv41936 Davidia involucrata HOM05D000212 ORTHO05D005509 1.9e-23 112.8 61 85.2
arahy.Tifrunner.gnm1.ann1.KVXN1E Arachis hypogaea HOM05D000212 ORTHO05D005509 2.5e-23 112.5 61 86.9
CSS0004363 Camellia sinensis var. sinensis HOM05D000212 ORTHO05D005509 2.5e-23 112.5 61 86.9
Oeu005702.1 Olea europaea HOM05D000212 ORTHO05D005509 3.3e-23 112.1 61 83.6
Glyma.10G281400 Glycine max HOM05D000212 ORTHO05D005509 5.6e-23 111.3 61 85.2
Gohir.A01G169100 Gossypium hirsutum HOM05D000212 ORTHO05D005509 5.6e-23 111.3 61 85.2
Gohir.D01G160100 Gossypium hirsutum HOM05D000212 ORTHO05D005509 5.6e-23 111.3 61 85.2
Gorai.002G198600 Gossypium raimondii HOM05D000212 ORTHO05D005509 5.6e-23 111.3 61 85.2
MBI08_g29141_MAGBIO Magnolia biondii HOM05D000212 ORTHO05D005509 1.3e-22 110.2 61 86.9
PSO541G1525 Papaver somniferum HOM05D000212 ORTHO05D005509 1.3e-22 110.2 61 85.2
SGA_v2.0_scaffold207G41924 Striga asiatica HOM05D000212 ORTHO05D005509 1.3e-22 110.2 61 83.6
VMungo0720G0733 Vigna mungo HOM05D000212 ORTHO05D005509 1.3e-22 110.2 61 85.2
Dinv14109 Davidia involucrata HOM05D000212 ORTHO05D005509 1.6e-22 109.8 61 82.0
Eucgr.I01423 Eucalyptus grandis HOM05D000212 ORTHO05D005509 1.6e-22 109.8 61 82.0
Medtr1g112510 Medicago truncatula HOM05D000212 ORTHO05D005509 1.6e-22 109.8 61 83.6
Phvul.007G019300 Phaseolus vulgaris HOM05D000212 ORTHO05D005509 1.6e-22 109.8 61 85.2
GSVIVG01024012001 Vitis vinifera HOM05D000212 ORTHO05D005509 1.6e-22 109.8 61 86.9
Psat6g231880 Pisum sativum HOM05D000212 ORTHO05D005509 2.1e-22 109.4 61 83.6
SalBow7G0410 Salvia bowleyana HOM05D000212 ORTHO05D005509 2.1e-22 109.4 61 83.6
Duzib132G0804 Durio zibethinus HOM05D000212 ORTHO05D005509 2.8e-22 109.0 61 83.6
PSO675G7560 Papaver somniferum HOM05D000212 ORTHO05D005509 2.8e-22 109.0 61 85.2
Hma1.2p1_0163F.1_g072520 Hydrangea macrophylla HOM05D000212 ORTHO05D005509 3.7e-22 108.6 61 83.6
Aqoxy6G02140 Aquilegia oxysepala HOM05D000212 ORTHO05D005509 4.8e-22 108.2 61 83.6
Lalb_Chr06g0163651 Lupinus albus HOM05D000212 ORTHO05D005509 4.8e-22 108.2 61 83.6
RcHm_v2.0_Chr7g0224761 Rosa chinensis HOM05D000212 ORTHO05D005509 4.8e-22 108.2 61 82.0
CANSAT25G2634 Cannabis sativa HOM05D000212 ORTHO05D005509 6.2e-22 107.8 61 82.0
Solyc01g111630.3 Solanum lycopersicum HOM05D000212 ORTHO05D005509 6.2e-22 107.8 61 82.0
PGSC0003DMG400006186 Solanum tuberosum HOM05D000212 ORTHO05D005509 6.2e-22 107.8 61 80.3
unitig_899.g15611 Utricularia gibba HOM05D000212 ORTHO05D005509 6.2e-22 107.8 61 80.3
ATR0180G008 Amborella trichopoda HOM05D000212 ORTHO05D005509 8.1e-22 107.5 61 82.0
EL10Ac9g21375 Beta vulgaris HOM05D000212 ORTHO05D005509 8.1e-22 107.5 61 82.0
AUR62013028 Chenopodium quinoa HOM05D000212 ORTHO05D005509 8.1e-22 107.5 61 82.0
AUR62043666 Chenopodium quinoa HOM05D000212 ORTHO05D005509 8.1e-22 107.5 61 82.0
Sopen01g053670 Solanum pennellii HOM05D000212 ORTHO05D005509 8.1e-22 107.5 61 80.3
Peaxi162Scf00362g00646 Petunia axillaris HOM05D000212 ORTHO05D005509 1.1e-21 107.1 61 80.3
SalBow7G0649 Salvia bowleyana HOM05D000212 ORTHO05D005509 1.1e-21 107.1 61 80.3
SalBow7G2155 Salvia bowleyana HOM05D000212 ORTHO05D005509 1.1e-21 107.1 61 80.3
Actinidia21457 Actinidia chinensis HOM05D000212 ORTHO05D005509 1.4e-21 106.7 61 80.3
Glyma.20G107800 Glycine max HOM05D000212 ORTHO05D005509 1.4e-21 106.7 61 83.6
Sc08g0002900 Simmondsia chinensis HOM05D000212 ORTHO05D005509 1.4e-21 106.7 61 80.3
MSTRG.5454 Avicennia marina HOM05D000212 ORTHO05D005509 1.8e-21 106.3 61 77.0
FvH4_5g30340 Fragaria vesca HOM05D000212 ORTHO05D005509 1.8e-21 106.3 61 80.3
FAN13G2675 Fragaria x ananassa HOM05D000212 ORTHO05D005509 1.8e-21 106.3 61 80.3
Ca_11207_v3 Cicer arietinum L. HOM05D000212 ORTHO05D005509 2.4e-21 105.9 61 82.0
Rhsim05G0056500 Rhododendron simsii HOM05D000212 ORTHO05D005509 2.4e-21 105.9 60 80.0
Sed0017644 Sechium edule HOM05D000212 ORTHO05D005509 2.4e-21 105.9 61 82.0
TPR.G36351 Trifolium pratense HOM05D000212 ORTHO05D005509 2.4e-21 105.9 61 82.0
ECA246G1556 Erigeron canadensis HOM05D000212 ORTHO05D005509 3.1e-21 105.5 61 82.0
Hund00191 Selenicereus undatus HOM05D000212 ORTHO05D005509 3.1e-21 105.5 61 80.3
TWI79G0672 Tripterygium wilfordii HOM05D000212 ORTHO05D005509 4.0e-21 105.1 61 80.3
vmacro17343 Vaccinium macrocarpon HOM05D000212 ORTHO05D005509 4.0e-21 105.1 62 77.4
HanXRQChr17g0544201 Helianthus annuus HOM05D000212 ORTHO05D005509 5.3e-21 104.8 61 78.7
Manes.04G076300 Manihot esculenta HOM05D000212 ORTHO05D005509 5.3e-21 104.8 61 78.7
Prupe.8G166000 Prunus persica HOM05D000212 ORTHO05D005509 5.3e-21 104.8 61 80.3
THA.LOC104824763 Tarenaya hassleriana HOM05D000212 ORTHO05D005509 5.3e-21 104.8 61 77.0
Aa31LG11G2730 Aethionema arabicum HOM05D000212 ORTHO05D005509 6.9e-21 104.4 61 78.7
QL11p050728 Quercus lobata HOM05D000212 ORTHO05D005509 6.9e-21 104.4 60 80.0
CDE02G3685 Ceratophyllum demersum HOM05D000212 ORTHO05D005509 9.0e-21 104.0 72 69.4
Lalb_Chr21g0306931 Lupinus albus HOM05D000212 ORTHO05D005509 9.0e-21 104.0 61 82.0
Sp5g23030 Schrenkiella parvula HOM05D000212 ORTHO05D005509 9.0e-21 104.0 61 78.7
Lalb_Chr02g0143391 Lupinus albus HOM05D000212 ORTHO05D005509 1.2e-20 103.6 59 81.4
Sabra04G0117700 Salix brachista HOM05D000212 ORTHO05D005509 1.2e-20 103.6 61 78.7
SMO145G0129 Selaginella moellendorffii HOM05D000212 ORTHO05D005509 1.2e-20 103.6 59 78.0
Cfa005249 Carpinus fangiana HOM05D000212 ORTHO05D005509 1.5e-20 103.2 61 80.3
CiPaw.05G082600 Carya illinoinensis HOM05D000212 ORTHO05D005509 1.5e-20 103.2 61 80.3
CDE04G1730 Ceratophyllum demersum HOM05D000212 ORTHO05D005509 1.5e-20 103.2 76 67.1
DCAR_022947 Daucus carota HOM05D000212 ORTHO05D005509 1.5e-20 103.2 61 77.0
Lsat_1_v5_gn_3_46860 Lactuca sativa HOM05D000212 ORTHO05D005509 1.5e-20 103.2 61 78.7
Potri.004G175800 Populus trichocarpa HOM05D000212 ORTHO05D005509 1.5e-20 103.2 61 80.3
Ah.01g023040 Amaranthus hybridus HOM05D000212 ORTHO05D005509 2.0e-20 102.8 61 78.7
BcaB03g15394 Brassica carinata HOM05D000212 ORTHO05D005509 2.0e-20 102.8 61 77.0
Ciclev10028639m.g Citrus clementina HOM05D000212 ORTHO05D005509 2.0e-20 102.8 61 78.7
Thhalv10018534m.g Eutrema salsugineum HOM05D000212 ORTHO05D005509 2.0e-20 102.8 61 77.0
MD05G1122100 Malus domestica HOM05D000212 ORTHO05D005509 2.0e-20 102.8 61 77.0
Os02g0101500 Oryza sativa ssp. japonica HOM05D000212 ORTHO05D005509 2.0e-20 102.8 61 80.3
Thecc.02G059100 Theobroma cacao HOM05D000212 ORTHO05D005509 2.0e-20 102.8 61 78.7
Carub.0002s1449 Capsella rubella HOM05D000212 ORTHO05D005509 2.6e-20 102.4 61 75.4
CARHR060660 Cardamine hirsuta HOM05D000212 ORTHO05D005509 2.6e-20 102.4 61 75.4
Migut.N01323 Erythranthe guttata HOM05D000212 ORTHO05D005509 2.6e-20 102.4 61 75.4
Nitab4.5_0000283g0400 Nicotiana tabacum HOM05D000212 ORTHO05D005509 2.6e-20 102.4 61 77.0
Nitab4.5_0003914g0050 Nicotiana tabacum HOM05D000212 ORTHO05D005509 2.6e-20 102.4 61 77.0
Prupe.7G264000 Prunus persica HOM05D000212 ORTHO05D005509 2.6e-20 102.4 61 75.4
AL2G26910 Arabidopsis lyrata HOM05D000212 ORTHO05D005509 3.4e-20 102.1 61 75.4
AT1G68010 Arabidopsis thaliana HOM05D000212 ORTHO05D005509 3.4e-20 102.1 61 75.4
BcaB03g15139 Brassica carinata HOM05D000212 ORTHO05D005509 4.5e-20 101.7 61 75.4
BcaC08g46227 Brassica carinata HOM05D000212 ORTHO05D005509 4.5e-20 101.7 61 75.4
BcaNung05109 Brassica carinata HOM05D000212 ORTHO05D005509 4.5e-20 101.7 61 75.4
Cpa.g.sc20.87 Carica papaya HOM05D000212 ORTHO05D005509 5.8e-20 101.3 55 83.6
ClCG02G004060 Citrullus lanatus HOM05D000212 ORTHO05D005509 7.6e-20 100.9 54 85.2
Cc09_g10170 Coffea canephora HOM05D000212 ORTHO05D005509 7.6e-20 100.9 60 76.7
MELO3C013350.2 Cucumis melo HOM05D000212 ORTHO05D005509 7.6e-20 100.9 54 85.2
CsaV3_7G001060 Cucumis sativus L. HOM05D000212 ORTHO05D005509 7.6e-20 100.9 54 85.2
Lj5g0017900 Lotus japonicus HOM05D000212 ORTHO05D005509 7.6e-20 100.9 53 88.7
Hma1.2p1_0163F.1_g072510 Hydrangea macrophylla HOM05D000212 ORTHO05D005509 1.0e-19 100.5 54 85.2
BcaC08g46003 Brassica carinata HOM05D000212 ORTHO05D005509 2.9e-19 99.0 61 77.0
CAN.G1040.7 Capsicum annuum HOM05D000212 ORTHO05D005509 3.8e-19 98.6 60 76.7
THA.LOC104807808 Tarenaya hassleriana HOM05D000212 ORTHO05D005509 4.9e-19 98.2 56 78.6
arahy.Tifrunner.gnm1.ann1.71EHKP Arachis hypogaea HOM05D000212 ORTHO05D005509 6.5e-19 97.8 53 84.9
FAN08G0938 Fragaria x ananassa HOM05D000212 ORTHO05D005509 1.1e-18 97.1 53 83.0
FAN18G0770 Fragaria x ananassa HOM05D000212 ORTHO05D005509 1.1e-18 97.1 53 83.0
A07p34520 Brassica napus HOM05D000212 ORTHO05D005509 5.5e-18 94.7 54 77.8
Haze_02134 Corylus avellana HOM05D000212 ORTHO05D005509 5.5e-18 94.7 54 79.6
CiPaw.06G121600 Carya illinoinensis HOM05D000212 ORTHO05D005509 7.1e-18 94.4 58 75.9
Hund01460 Selenicereus undatus HOM05D000212 ORTHO05D005509 7.1e-18 94.4 59 76.3
C06p42000 Brassica napus HOM05D000573 ORTHO05D005509 1.2e-17 93.6 54 75.9
BolC6t39228H Brassica oleracea HOM05D000212 ORTHO05D005509 1.2e-17 93.6 54 75.9
Pp3c19_20080 Physcomitrium patens HOM05D000212 ORTHO05D005509 1.2e-17 93.6 55 74.5
Zm00001eb229250 Zea mays HOM05D000212 ORTHO05D005509 6.0e-17 91.3 53 75.5
Mapoly0015s0044 Marchantia polymorpha HOM05D000212 ORTHO05D005509 7.9e-17 90.9 58 69.0
TAR633G2032 Trochodendron aralioides HOM05D000212 ORTHO05D005509 1.8e-16 89.7 55 80.0
AagrBONN_evm.TU.Sc2ySwM_117.3207 Anthoceros agrestis HOM05D000212 ORTHO05D005509 8.7e-16 87.4 55 70.9
Hund28420 Selenicereus undatus HOM05D000212 ORTHO05D005509 8.7e-16 87.4 59 71.2
Hund28422 Selenicereus undatus HOM05D000212 ORTHO05D005509 8.7e-16 87.4 59 71.2
Actinidia28255 Actinidia chinensis HOM05D000212 ORTHO05D005509 1.5e-15 86.7 51 74.5
Actinidia33560 Actinidia chinensis HOM05D000212 ORTHO05D005509 1.5e-15 86.7 51 74.5
CAN.G588.84 Capsicum annuum HOM05D000212 ORTHO05D005509 1.5e-15 86.7 58 75.9
CBR_g49204 Chara braunii HOM05D000212 ORTHO05D005509 4.3e-15 85.1 55 67.3
COL.COLO4_17344 Corchorus olitorius HOM05D000212 ORTHO05D005509 5.7e-15 84.7 44 84.1
HPP92_022190 Vanilla planifolia HOM05D000212 ORTHO05D005509 5.7e-15 84.7 49 73.5
CAN.G518.15 Capsicum annuum HOM05D000212 ORTHO05D005509 1.1e-13 80.5 58 72.4
Pp3c18_12500 Physcomitrium patens HOM05D000212 ORTHO05D005509 1.2e-12 77.0 56 66.1
Ah.01g008420 Amaranthus hybridus HOM05D000212 ORTHO05D005509 1.0e-11 73.9 46 71.7
CAN.G798.47 Capsicum annuum HOM05D000212 ORTHO05D005509 2.9e-11 72.4 45 75.6
CAN.G937.5 Capsicum annuum HOM05D000212 ORTHO05D005509 1.9e-10 69.7 45 71.1
Cre06.g295450 Chlamydomonas reinhardtii HOM05D000212 ORTHO05D005509 6.7e-08 61.2 57 56.1
Atru.chr5.3324 Acer truncatum HOM05D000212 ORTHO05D005509 1.1e-07 60.5 59 49.2
PRCOL_00005045 Prasinoderma coloniale HOM05D000212 ORTHO05D005509 2.5e-07 59.3 56 51.8


User provided reference genes

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