Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.6e-250 869.0 449 100.0
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 4.3e-171 605.1 310 100.0
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 1.9e-158 563.1 399 70.7
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 4.3e-155 552.0 399 69.4
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 1.8e-153 546.6 401 69.6
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 5.8e-152 541.6 399 67.4
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 3.2e-150 535.8 399 67.7
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 4.6e-149 531.9 400 66.8
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 4.6e-149 531.9 400 66.2
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 6.0e-149 531.6 400 66.8
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 1.7e-148 530.0 399 67.7
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 3.0e-148 529.3 399 67.9
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 5.1e-148 528.5 399 67.9
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 8.7e-148 527.7 399 66.4
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 3.3e-147 525.8 399 66.4
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 4.3e-147 525.4 399 66.4
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 4.3e-147 525.4 399 67.2
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 1.2e-146 523.9 399 65.4
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 2.8e-146 522.7 399 65.9
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 3.6e-146 522.3 399 65.9
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 6.2e-146 521.5 399 64.9
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 8.1e-146 521.2 400 65.5
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 1.1e-145 520.8 399 66.4
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 1.1e-145 520.8 399 65.7
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 1.4e-145 520.4 399 65.4
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 1.4e-145 520.4 399 65.9
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 5.3e-145 518.5 399 64.9
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 6.9e-145 518.1 400 66.0
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 1.2e-144 517.3 400 66.0
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 4.4e-144 515.4 399 65.4
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 4.4e-144 515.4 400 65.8
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 1.3e-143 513.8 400 65.0
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 1.3e-143 513.8 400 65.2
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 2.9e-143 512.7 400 65.5
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 3.8e-143 512.3 400 65.5
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 3.8e-143 512.3 400 64.8
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 4.9e-143 511.9 400 64.5
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 8.4e-143 511.1 399 64.9
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 5.4e-142 508.4 399 64.7
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 9.3e-142 507.7 399 64.7
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 2.1e-141 506.5 399 63.7
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 4.6e-141 505.4 399 64.2
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 6.0e-141 505.0 398 63.8
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 6.0e-141 505.0 400 64.2
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 7.8e-141 504.6 399 63.2
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 7.8e-141 504.6 401 64.1
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 6.6e-140 501.5 400 64.2
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 8.7e-140 501.1 399 63.4
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 1.5e-139 500.4 399 62.7
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 2.5e-139 499.6 400 61.8
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 2.5e-139 499.6 399 63.4
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 3.3e-139 499.2 399 62.2
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 3.3e-139 499.2 422 61.6
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 5.6e-139 498.4 399 62.9
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 9.6e-139 497.7 399 62.2
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 1.3e-138 497.3 399 62.4
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 1.6e-138 496.9 399 61.4
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 1.6e-138 496.9 399 62.7
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 2.1e-138 496.5 399 61.7
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 2.8e-138 496.1 400 61.5
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 4.8e-138 495.4 400 62.5
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 4.8e-138 495.4 400 63.2
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 6.2e-138 495.0 399 62.2
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 8.1e-138 494.6 399 62.9
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 8.1e-138 494.6 400 64.0
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 1.1e-137 494.2 399 62.9
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 1.4e-137 493.8 399 61.7
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 1.8e-137 493.4 399 62.2
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 2.4e-137 493.0 399 61.2
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 2.4e-137 493.0 399 62.2
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 2.4e-137 493.0 399 60.9
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 6.9e-137 491.5 400 63.8
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 2.6e-136 489.6 399 61.4
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 3.4e-136 489.2 399 61.4
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 3.4e-136 489.2 400 61.5
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 1.7e-135 486.9 432 59.7
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 2.9e-135 486.1 399 61.9
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 3.8e-135 485.7 398 61.8
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 3.8e-135 485.7 399 61.7
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 1.1e-134 484.2 401 61.8
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 4.2e-134 482.3 399 58.9
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 1.6e-133 480.3 399 61.2
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 2.1e-133 479.9 401 60.1
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 7.9e-133 478.0 399 61.4
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 7.9e-133 478.0 399 60.7
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 3.0e-132 476.1 400 61.2
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 1.5e-131 473.8 399 60.4
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 1.3e-130 470.7 402 60.9
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 1.4e-129 467.2 399 58.4
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 1.8e-129 466.8 403 61.3
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 2.4e-129 466.5 398 61.6
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 9.0e-129 464.5 401 59.6
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 9.0e-129 464.5 401 59.6
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 1.3e-122 444.1 399 57.9
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 3.7e-122 442.6 326 67.2
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 2.5e-115 419.9 399 56.6
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 2.8e-114 416.4 403 52.9
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 4.6e-109 399.1 304 64.8
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 3.0e-108 396.4 410 52.4
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 1.8e-105 387.1 403 50.6
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 2.6e-99 366.7 401 50.1
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 1.0e-95 354.8 403 51.4
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 8.5e-79 298.5 222 65.8
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 1.4e-68 264.6 290 45.5
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 1.9e-54 217.6 161 67.1
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.4e-44 184.9 94 98.9
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 5.3e-28 129.8 130 55.4
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 4.3e-22 110.2 75 62.7
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 8.1e-21 105.9 98 65.3
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 3.9e-07 60.5 60 56.7


User provided reference genes

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