Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_25392 Sequoiadendron giganteum HOM05D003169 ORTHO05D003700 9.5e-83 310.1 150 100.0
SEGI_09386 Sequoiadendron giganteum HOM05D003169 ORTHO05D003700 2.1e-21 106.3 62 85.5
ATR0794G028 Amborella trichopoda HOM05D003169 ORTHO05D003700 4.3e-19 98.6 75 57.3
Pp3c3_5410 Physcomitrium patens HOM05D003169 ORTHO05D003700 2.2e-18 96.3 72 59.7
GSVIVG01036703001 Vitis vinifera HOM05D003169 ORTHO05D003700 6.3e-18 94.7 75 58.7
PSO541G6458 Papaver somniferum HOM05D003169 ORTHO05D003700 1.8e-17 93.2 81 56.8
PSO675G7315 Papaver somniferum HOM05D003169 ORTHO05D003700 1.8e-17 93.2 81 56.8
QL04p010784 Quercus lobata HOM05D003169 ORTHO05D003700 1.8e-17 93.2 75 58.7
QL04p095761 Quercus lobata HOM05D003169 ORTHO05D003700 1.8e-17 93.2 75 58.7
Nn7g38410 Nelumbo nucifera HOM05D003169 ORTHO05D003700 2.4e-17 92.8 75 56.0
RcHm_v2.0_Chr5g0023151 Rosa chinensis HOM05D003169 ORTHO05D003700 3.1e-17 92.4 80 55.0
Actinidia26204 Actinidia chinensis HOM05D003169 ORTHO05D003700 4.1e-17 92.0 75 54.7
BcaB02g08679 Brassica carinata HOM05D003169 ORTHO05D003700 4.1e-17 92.0 75 57.3
BcaB02g08681 Brassica carinata HOM05D003169 ORTHO05D003700 4.1e-17 92.0 75 57.3
BcaC08g47495 Brassica carinata HOM05D003169 ORTHO05D003700 4.1e-17 92.0 75 57.3
A07p44430 Brassica napus HOM05D003169 ORTHO05D003700 4.1e-17 92.0 75 57.3
C06p53240 Brassica napus HOM05D003169 ORTHO05D003700 4.1e-17 92.0 75 57.3
BolC6t40342H Brassica oleracea HOM05D003169 ORTHO05D003700 4.1e-17 92.0 75 57.3
BraA07t31952Z Brassica rapa HOM05D003169 ORTHO05D003700 4.1e-17 92.0 75 57.3
Cfa017765 Carpinus fangiana HOM05D003169 ORTHO05D003700 4.1e-17 92.0 75 57.3
FAN16G1231 Fragaria x ananassa HOM05D003169 ORTHO05D003700 4.1e-17 92.0 96 50.0
TAR627G0022 Trochodendron aralioides HOM05D003169 ORTHO05D003700 4.1e-17 92.0 75 57.3
CSS0011288 Camellia sinensis var. sinensis HOM05D003169 ORTHO05D003700 5.3e-17 91.7 75 54.7
Dinv42454 Davidia involucrata HOM05D003169 ORTHO05D003700 5.3e-17 91.7 75 56.0
Thecc.07G189500 Theobroma cacao HOM05D003169 ORTHO05D003700 5.3e-17 91.7 75 57.3
COL.COLO4_25001 Corchorus olitorius HOM05D003169 ORTHO05D003700 6.9e-17 91.3 75 56.0
Thhalv10018021m.g Eutrema salsugineum HOM05D003169 ORTHO05D003700 6.9e-17 91.3 75 56.0
FvH4_3g13920 Fragaria vesca HOM05D003169 ORTHO05D003700 6.9e-17 91.3 80 53.8
FAN21G1262 Fragaria x ananassa HOM05D003169 ORTHO05D003700 6.9e-17 91.3 80 53.8
FAN25G3213 Fragaria x ananassa HOM05D003169 ORTHO05D003700 6.9e-17 91.3 80 53.8
Gohir.A13G126700 Gossypium hirsutum HOM05D003169 ORTHO05D003700 6.9e-17 91.3 75 56.0
Gohir.D13G130400 Gossypium hirsutum HOM05D003169 ORTHO05D003700 6.9e-17 91.3 75 56.0
Gorai.013G146500 Gossypium raimondii HOM05D003169 ORTHO05D003700 6.9e-17 91.3 75 56.0
Sp5g34410 Schrenkiella parvula HOM05D003169 ORTHO05D003700 6.9e-17 91.3 75 56.0
Carub.0002s2621 Capsella rubella HOM05D003169 ORTHO05D003700 9.0e-17 90.9 75 56.0
Cpa.g.sc32.147 Carica papaya HOM05D003169 ORTHO05D003700 9.0e-17 90.9 75 56.0
DCAR_016853 Daucus carota HOM05D003169 ORTHO05D003700 9.0e-17 90.9 91 47.3
Glyma.08G233702 Glycine max HOM05D003169 ORTHO05D003700 9.0e-17 90.9 80 57.5
Glyma.15G219200 Glycine max HOM05D003169 ORTHO05D003700 9.0e-17 90.9 80 57.5
Lj2A8G61 Lonicera japonica HOM05D003169 ORTHO05D003700 9.0e-17 90.9 75 56.0
Potri.010G174900 Populus trichocarpa HOM05D003169 ORTHO05D003700 9.0e-17 90.9 75 57.3
Sabra10G0134700 Salix brachista HOM05D003169 ORTHO05D003700 9.0e-17 90.9 75 57.3
Aa31LG4G1680 Aethionema arabicum HOM05D003169 ORTHO05D003700 1.2e-16 90.5 75 56.0
SMO358G0497 Selaginella moellendorffii HOM05D003169 ORTHO05D003700 1.2e-16 90.5 75 54.7
THA.LOC104812392 Tarenaya hassleriana HOM05D003169 ORTHO05D003700 1.2e-16 90.5 75 58.7
HPP92_005947 Vanilla planifolia HOM05D003169 ORTHO05D003700 1.2e-16 90.5 72 56.9
CiPaw.15G111900 Carya illinoinensis HOM05D003169 ORTHO05D003700 1.5e-16 90.1 75 54.7
AUR62043014 Chenopodium quinoa HOM05D003169 ORTHO05D003700 1.5e-16 90.1 83 50.6
Duzib213G0284 Durio zibethinus HOM05D003169 ORTHO05D003700 1.5e-16 90.1 75 54.7
Manes.16G048930 Manihot esculenta HOM05D003169 ORTHO05D003700 1.5e-16 90.1 81 54.3
AT1G79350 Arabidopsis thaliana HOM05D003169 ORTHO05D003700 2.0e-16 89.7 75 54.7
ECA240G3251 Erigeron canadensis HOM05D003169 ORTHO05D003700 2.0e-16 89.7 85 52.9
Migut.M01496 Erythranthe guttata HOM05D003169 ORTHO05D003700 2.0e-16 89.7 75 54.7
Prupe.4G126100 Prunus persica HOM05D003169 ORTHO05D003700 2.0e-16 89.7 75 56.0
TWI38G0104 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 2.0e-16 89.7 83 53.0
TWI38G0597 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 2.0e-16 89.7 83 53.0
Hma1.2p1_0754F.1_g213010 Hydrangea macrophylla HOM05D003169 ORTHO05D003700 2.6e-16 89.4 75 54.7
Atru.chr1.22 Acer truncatum HOM05D003169 ORTHO05D003700 3.4e-16 89.0 75 56.0
Cc00_g09100 Coffea canephora HOM05D003169 ORTHO05D003700 3.4e-16 89.0 75 54.7
PGR031G0700 Punica granatum HOM05D003169 ORTHO05D003700 3.4e-16 89.0 75 57.3
Rhsim06G0244800 Rhododendron simsii HOM05D003169 ORTHO05D003700 3.4e-16 89.0 75 53.3
Hund20128 Selenicereus undatus HOM05D003169 ORTHO05D003700 3.4e-16 89.0 75 52.0
vmacro22494 Vaccinium macrocarpon HOM05D003169 ORTHO05D003700 3.4e-16 89.0 75 53.3
Lalb_Chr19g0133151 Lupinus albus HOM05D003169 ORTHO05D003700 4.5e-16 88.6 75 53.3
MD05G1239900 Malus domestica HOM05D003169 ORTHO05D003700 4.5e-16 88.6 75 54.7
Medtr8g447090 Medicago truncatula HOM05D003169 ORTHO05D003700 4.5e-16 88.6 75 54.7
Phvul.011G180100 Phaseolus vulgaris HOM05D003169 ORTHO05D003700 4.5e-16 88.6 75 56.0
VMungo1127G0192 Vigna mungo HOM05D003169 ORTHO05D003700 4.5e-16 88.6 75 56.0
CANSAT56G1976 Cannabis sativa HOM05D003169 ORTHO05D003700 5.9e-16 88.2 72 55.6
Peaxi162Scf00670g00216 Petunia axillaris HOM05D003169 ORTHO05D003700 5.9e-16 88.2 75 54.7
TPR.G30141 Trifolium pratense HOM05D003169 ORTHO05D003700 5.9e-16 88.2 75 54.7
TPR.G3619 Trifolium pratense HOM05D003169 ORTHO05D003700 5.9e-16 88.2 85 52.9
AUR62041054 Chenopodium quinoa HOM05D003169 ORTHO05D003700 7.6e-16 87.8 83 49.4
Psat4g185200 Pisum sativum HOM05D003169 ORTHO05D003700 7.6e-16 87.8 75 54.7
Sed0006985 Sechium edule HOM05D003169 ORTHO05D003700 7.6e-16 87.8 84 51.2
arahy.Tifrunner.gnm1.ann1.4D9FZH Arachis hypogaea HOM05D003169 ORTHO05D003700 1.0e-15 87.4 70 55.7
Ca_22977_v3 Cicer arietinum L. HOM05D003169 ORTHO05D003700 1.0e-15 87.4 75 54.7
Lj3g0024633 Lotus japonicus HOM05D003169 ORTHO05D003700 1.0e-15 87.4 75 53.3
arahy.Tifrunner.gnm1.ann1.0T77JN Arachis hypogaea HOM05D003169 ORTHO05D003700 1.3e-15 87.0 70 55.7
Nitab4.5_0003291g0060 Nicotiana tabacum HOM05D003169 ORTHO05D003700 1.3e-15 87.0 75 53.3
Nitab4.5_0007774g0020 Nicotiana tabacum HOM05D003169 ORTHO05D003700 1.3e-15 87.0 75 53.3
CAN.G492.81 Capsicum annuum HOM05D003169 ORTHO05D003700 1.7e-15 86.7 75 53.3
MELO3C019615.2 Cucumis melo HOM05D003169 ORTHO05D003700 1.7e-15 86.7 75 53.3
Eucgr.F04478 Eucalyptus grandis HOM05D003169 ORTHO05D003700 1.7e-15 86.7 75 52.0
MD10G1218000 Malus domestica HOM05D003169 ORTHO05D003700 1.7e-15 86.7 75 54.7
Oeu025995.1 Olea europaea HOM05D003169 ORTHO05D003700 1.7e-15 86.7 75 50.7
MSTRG.7098 Avicennia marina HOM05D003169 ORTHO05D003700 2.2e-15 86.3 75 52.0
TAR629G1197 Trochodendron aralioides HOM05D003169 ORTHO05D003700 2.2e-15 86.3 75 53.3
ClCG02G018810 Citrullus lanatus HOM05D003169 ORTHO05D003700 3.8e-15 85.5 75 53.3
Lj3g0007581 Lotus japonicus HOM05D003169 ORTHO05D003700 3.8e-15 85.5 78 48.7
Aqoxy1G01380 Aquilegia oxysepala HOM05D003169 ORTHO05D003700 5.0e-15 85.1 69 56.5
HanXRQChr03g0077801 Helianthus annuus HOM05D003169 ORTHO05D003700 5.0e-15 85.1 75 53.3
EL10Ac2g03244 Beta vulgaris HOM05D003169 ORTHO05D003700 6.5e-15 84.7 83 49.4
Potri.008G081200 Populus trichocarpa HOM05D003169 ORTHO05D003700 6.5e-15 84.7 75 52.0
CsaV3_6G013370 Cucumis sativus L. HOM05D003169 ORTHO05D003700 8.5e-15 84.3 75 52.0
Sopen10g001470 Solanum pennellii HOM05D003169 ORTHO05D003700 1.1e-14 84.0 75 50.7
Mapoly0153s0011 Marchantia polymorpha HOM05D003169 ORTHO05D003700 1.9e-14 83.2 72 54.2
Oeu029455.1 Olea europaea HOM05D003169 ORTHO05D003700 1.9e-14 83.2 84 47.6
Psat0s11g0040 Pisum sativum HOM05D003169 ORTHO05D003700 1.9e-14 83.2 78 52.6
Zm00001eb413950 Zea mays HOM05D003169 ORTHO05D003700 2.5e-14 82.8 72 51.4
Ca_03194_v3 Cicer arietinum L. HOM05D003845 ORTHO05D003700 3.2e-14 82.4 85 50.6
Lsat_1_v5_gn_7_69060 Lactuca sativa HOM05D003169 ORTHO05D003700 3.2e-14 82.4 73 53.4
AagrBONN_evm.TU.Sc2ySwM_228.2486 Anthoceros agrestis HOM05D003169 ORTHO05D003700 7.2e-14 81.3 72 54.2
Peaxi162Scf00166g00077 Petunia axillaris HOM05D003169 ORTHO05D003700 7.2e-14 81.3 75 52.0
SGA_v2.0_scaffold186G40168 Striga asiatica HOM05D003169 ORTHO05D003700 9.3e-14 80.9 75 53.3
CSS0003080 Camellia sinensis var. sinensis HOM05D003169 ORTHO05D003700 1.6e-13 80.1 70 54.3
Sc06g0001640 Simmondsia chinensis HOM05D003169 ORTHO05D003700 2.1e-13 79.7 70 51.4
arahy.Tifrunner.gnm1.ann1.JSN7JY Arachis hypogaea HOM05D003169 ORTHO05D003700 2.7e-13 79.3 70 52.9
Lalb_Chr20g0108381 Lupinus albus HOM05D003169 ORTHO05D003700 2.7e-13 79.3 81 48.1
Medtr2g063620 Medicago truncatula HOM05D003169 ORTHO05D003700 3.6e-13 79.0 63 60.3
Zm00001eb430630 Zea mays HOM05D003169 ORTHO05D003700 3.6e-13 79.0 75 48.0
CBR_g11926 Chara braunii HOM05D003169 ORTHO05D000002 6.1e-13 78.2 72 48.6
DCAR_013706 Daucus carota HOM05D003169 ORTHO05D003700 6.1e-13 78.2 63 57.1
Peaxi162Scf00420g00518 Petunia axillaris HOM05D003169 ORTHO05D003700 6.1e-13 78.2 69 52.2
Os04g0609700 Oryza sativa ssp. japonica HOM05D003169 ORTHO05D003700 7.9e-13 77.8 72 48.6
arahy.Tifrunner.gnm1.ann1.THX68V Arachis hypogaea HOM05D003169 ORTHO05D003700 1.0e-12 77.4 70 51.4
Rhsim02G0183500 Rhododendron simsii HOM05D003169 ORTHO05D003700 1.8e-12 76.6 70 51.4
Rhsim06G0106300 Rhododendron simsii HOM05D003169 ORTHO05D003700 1.8e-12 76.6 62 54.8
Haze_18485 Corylus avellana HOM05D003169 ORTHO05D003700 2.3e-12 76.3 75 50.7
HanXRQChr16g0505691 Helianthus annuus HOM05D003169 ORTHO05D003700 8.8e-12 74.3 74 50.0
Oeu032680.1 Olea europaea HOM05D003169 ORTHO05D003700 8.8e-12 74.3 62 51.6
HanXRQChr13g0408911 Helianthus annuus HOM05D003169 ORTHO05D003700 1.9e-11 73.2 74 48.6
HanXRQChr13g0408941 Helianthus annuus HOM05D003169 ORTHO05D003700 1.9e-11 73.2 74 48.6
DCAR_013705 Daucus carota HOM05D003169 ORTHO05D003700 9.7e-11 70.9 63 52.4
Medtr2g063813 Medicago truncatula HOM05D003169 ORTHO05D003700 1.7e-10 70.1 60 56.7
Medtr6g091960 Medicago truncatula HOM05D003169 ORTHO05D003700 1.7e-10 70.1 60 56.7
TPR.G39754 Trifolium pratense HOM05D003169 ORTHO05D003700 4.8e-10 68.6 61 54.1
Thhalv10000653m.g Eutrema salsugineum HOM05D003169 ORTHO05D003700 1.1e-09 67.4 54 55.6
TPR.G3624 Trifolium pratense HOM05D003169 ORTHO05D003700 4.1e-09 65.5 59 55.9
TPR.G7301 Trifolium pratense HOM05D003169 ORTHO05D003700 9.1e-09 64.3 55 58.2
FAN11G1789 Fragaria x ananassa HOM05D003169 ORTHO05D003700 3.4e-08 62.4 80 43.8
Ah.16g106160 Amaranthus hybridus HOM05D003169 ORTHO05D003700 5.9e-08 61.6 61 52.5
TPR.G14822 Trifolium pratense HOM05D003169 ORTHO05D003700 2.9e-07 59.3 55 54.5
TPR.G19390 Trifolium pratense HOM05D003169 ORTHO05D003700 6.5e-07 58.2 54 53.7


User provided reference genes

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