Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_25247 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 4.5e-225 784.3 398 100.0
SEGI_07118 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 1.0e-192 676.8 343 100.0
SEGI_29284 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 3.8e-163 578.6 326 88.7
MBI18_g25945_MAGBIO Magnolia biondii HOM05D005030 ORTHO05D006490 1.1e-93 347.8 326 52.1
GSVIVG01026545001 Vitis vinifera HOM05D005030 ORTHO05D006490 1.1e-90 337.8 326 51.8
Ciclev10024723m.g Citrus clementina HOM05D005030 ORTHO05D006490 9.5e-90 334.7 326 50.0
Actinidia06653 Actinidia chinensis HOM05D005030 ORTHO05D006490 4.7e-89 332.4 326 51.2
Thecc.01G124600 Theobroma cacao HOM05D005030 ORTHO05D006490 8.1e-89 331.6 326 50.6
CSS0019451 Camellia sinensis var. sinensis HOM05D005030 ORTHO05D006490 2.3e-88 330.1 326 50.3
Gohir.D11G232200 Gossypium hirsutum HOM05D005030 ORTHO05D006490 3.1e-88 329.7 326 50.3
Gorai.002G151400 Gossypium raimondii HOM05D005030 ORTHO05D006490 3.1e-88 329.7 326 50.3
Dinv24313 Davidia involucrata HOM05D005030 ORTHO05D006490 4.0e-88 329.3 326 49.7
Nitab4.5_0002909g0070 Nicotiana tabacum HOM05D005030 ORTHO05D006490 4.0e-88 329.3 326 52.1
Gohir.A11G230400 Gossypium hirsutum HOM05D005030 ORTHO05D006490 6.8e-88 328.6 326 49.7
Nitab4.5_0003048g0010 Nicotiana tabacum HOM05D005030 ORTHO05D006490 8.9e-88 328.2 326 51.5
Os02g0782800 Oryza sativa ssp. japonica HOM05D005030 ORTHO05D006490 1.2e-87 327.8 326 51.2
Sc03g0005100 Simmondsia chinensis HOM05D005030 ORTHO05D006490 1.5e-87 327.4 326 51.2
Atru.chr4.774 Acer truncatum HOM05D005030 ORTHO05D006490 2.0e-87 327.0 326 50.6
Zm00001eb192940 Zea mays HOM05D005030 ORTHO05D006490 2.6e-87 326.6 326 50.6
PSO832G2315 Papaver somniferum HOM05D005030 ORTHO05D006490 4.4e-87 325.9 328 49.7
Eucgr.H04934 Eucalyptus grandis HOM05D005030 ORTHO05D006490 5.8e-87 325.5 326 50.3
PSO210G3052 Papaver somniferum HOM05D005030 ORTHO05D006490 5.8e-87 325.5 328 49.4
Cfa002838 Carpinus fangiana HOM05D005030 ORTHO05D006490 9.9e-87 324.7 326 48.8
Duzib147G1675 Durio zibethinus HOM05D005030 ORTHO05D006490 1.7e-86 323.9 326 49.7
Lj2A602G37 Lonicera japonica HOM05D005030 ORTHO05D006490 2.2e-86 323.6 326 48.5
Psat7g048200 Pisum sativum HOM05D005030 ORTHO05D006490 2.9e-86 323.2 345 47.8
CDE06G1651 Ceratophyllum demersum HOM05D005030 ORTHO05D006490 6.4e-86 322.0 326 48.5
Prupe.3G147500 Prunus persica HOM05D005030 ORTHO05D006490 8.3e-86 321.6 326 49.1
Ca_17653_v3 Cicer arietinum L. HOM05D005030 ORTHO05D006490 1.4e-85 320.9 326 49.1
Cc08_g02710 Coffea canephora HOM05D005030 ORTHO05D006490 4.1e-85 319.3 326 49.1
MSTRG.2678 Avicennia marina HOM05D005030 ORTHO05D006490 5.4e-85 318.9 345 47.5
HanXRQChr02g0043651 Helianthus annuus HOM05D005030 ORTHO05D006490 1.2e-84 317.8 326 48.2
VMungo0251G0340 Vigna mungo HOM05D005030 ORTHO05D006490 1.6e-84 317.4 326 48.2
Solyc11g005690.3 Solanum lycopersicum HOM05D005030 ORTHO05D006490 3.5e-84 316.2 326 50.3
Sopen11g001650 Solanum pennellii HOM05D005030 ORTHO05D006490 3.5e-84 316.2 326 50.3
HPP92_005719 Vanilla planifolia HOM05D005030 ORTHO05D006490 7.8e-84 315.1 305 50.5
Nn5g28681 Nelumbo nucifera HOM05D005030 ORTHO05D006490 1.3e-83 314.3 326 48.2
RcHm_v2.0_Chr2g0120111 Rosa chinensis HOM05D005030 ORTHO05D006490 1.3e-83 314.3 326 49.1
PGR102G2159 Punica granatum HOM05D005030 ORTHO05D006490 1.7e-83 313.9 326 47.9
QL06p030436 Quercus lobata HOM05D005030 ORTHO05D006490 1.7e-83 313.9 326 48.8
ECA240G4559 Erigeron canadensis HOM05D005030 ORTHO05D006490 3.9e-83 312.8 325 46.5
AUR62017924 Chenopodium quinoa HOM05D005030 ORTHO05D006490 5.1e-83 312.4 326 49.7
THA.LOC104821859 Tarenaya hassleriana HOM05D005030 ORTHO05D006490 5.1e-83 312.4 326 48.2
TWI31G0652 Tripterygium wilfordii HOM05D005030 ORTHO05D006490 2.5e-82 310.1 326 49.4
AUR62003613 Chenopodium quinoa HOM05D005030 ORTHO05D006490 1.6e-81 307.4 326 49.1
DCAR_001349 Daucus carota HOM05D005030 ORTHO05D006490 1.6e-81 307.4 326 48.8
unitig_0.g2514 Utricularia gibba HOM05D005030 ORTHO05D006490 1.6e-81 307.4 326 48.2
Ah.03g146670 Amaranthus hybridus HOM05D005030 ORTHO05D006490 4.7e-81 305.8 326 49.1
Hma1.2p1_0006F.1_g004750 Hydrangea macrophylla HOM05D005030 ORTHO05D006490 4.7e-81 305.8 368 44.0
Manes.12G152000 Manihot esculenta HOM05D005030 ORTHO05D006490 6.2e-81 305.4 326 47.2
Peaxi162Scf00012g02419 Petunia axillaris HOM05D005030 ORTHO05D006490 6.2e-81 305.4 326 49.1
Medtr8g093100 Medicago truncatula HOM05D005030 ORTHO05D006490 8.1e-81 305.1 326 48.2
Migut.H01102 Erythranthe guttata HOM05D005030 ORTHO05D006490 4.0e-80 302.8 326 48.8
Aa31LG8G5540 Aethionema arabicum HOM05D005030 ORTHO05D006490 1.2e-79 301.2 361 44.0
FAN26G2615 Fragaria x ananassa HOM05D005030 ORTHO05D006490 1.2e-79 301.2 326 46.6
SHI11439 Sapria himalayana HOM05D005030 ORTHO05D006490 1.2e-79 301.2 326 47.5
TPR.G37387 Trifolium pratense HOM05D005030 ORTHO05D006490 1.2e-79 301.2 342 45.3
THA.LOC104820424 Tarenaya hassleriana HOM05D005030 ORTHO05D006490 3.4e-79 299.7 326 46.6
FAN28G1848 Fragaria x ananassa HOM05D005030 ORTHO05D006490 4.4e-79 299.3 326 46.6
A05p30890 Brassica napus HOM05D005030 ORTHO05D006490 7.6e-79 298.5 326 46.0
FAN19G2772 Fragaria x ananassa HOM05D005030 ORTHO05D006490 9.9e-79 298.1 326 46.3
FAN23G1259 Fragaria x ananassa HOM05D005030 ORTHO05D006490 9.9e-79 298.1 326 46.3
BcaC05g28579 Brassica carinata HOM05D005030 ORTHO05D006490 1.7e-78 297.4 326 46.0
C05p46820 Brassica napus HOM05D005030 ORTHO05D006490 1.7e-78 297.4 326 46.0
BolC5t33412H Brassica oleracea HOM05D005030 ORTHO05D006490 1.7e-78 297.4 326 46.0
FvH4_1g23980 Fragaria vesca HOM05D005030 ORTHO05D006490 1.7e-78 297.4 326 46.3
BcaB06g25924 Brassica carinata HOM05D005030 ORTHO05D006490 2.9e-78 296.6 326 45.7
BraA05t21931Z Brassica rapa HOM05D005030 ORTHO05D006490 3.8e-78 296.2 326 45.7
Sp3g16780 Schrenkiella parvula HOM05D005030 ORTHO05D006490 6.4e-78 295.4 326 46.9
CsaV3_6G041830 Cucumis sativus L. HOM05D005030 ORTHO05D006490 1.4e-77 294.3 326 46.6
Aqoxy5G02153 Aquilegia oxysepala HOM05D005030 ORTHO05D006490 1.9e-77 293.9 326 48.5
CARHR094120 Cardamine hirsuta HOM05D005030 ORTHO05D006490 3.2e-77 293.1 326 46.0
Hund04465 Selenicereus undatus HOM05D005030 ORTHO05D006490 5.4e-77 292.4 326 47.5
Thhalv10019906m.g Eutrema salsugineum HOM05D005030 ORTHO05D006490 1.2e-76 291.2 326 45.7
Potri.007G110800 Populus trichocarpa HOM05D005030 ORTHO05D006490 1.6e-76 290.8 326 47.2
Phvul.002G270100 Phaseolus vulgaris HOM05D005030 ORTHO05D006490 4.6e-76 289.3 326 46.6
MD00G1172700 Malus domestica HOM05D005030 ORTHO05D006490 1.0e-75 288.1 326 44.5
SGA_v2.0_scaffold137G35137 Striga asiatica HOM05D005030 ORTHO05D006490 1.3e-75 287.7 329 45.0
AT3G18730 Arabidopsis thaliana HOM05D005030 ORTHO05D006490 1.7e-75 287.3 326 44.2
AL3G32080 Arabidopsis lyrata HOM05D005030 ORTHO05D006490 2.3e-75 287.0 326 44.8
ATR0772G104 Amborella trichopoda HOM05D005030 ORTHO05D006490 8.7e-75 285.0 325 45.8
Sed0011527 Sechium edule HOM05D005030 ORTHO05D006490 4.3e-74 282.7 326 44.8
CiPaw.03G127100 Carya illinoinensis HOM05D005030 ORTHO05D006490 4.0e-72 276.2 326 44.2
Glyma.05G189400 Glycine max HOM05D005030 ORTHO05D006490 4.0e-72 276.2 326 44.5
MELO3C008038.2 Cucumis melo HOM05D005030 ORTHO05D006490 5.3e-72 275.8 326 44.2
Lsat_1_v5_gn_1_117161 Lactuca sativa HOM05D005030 ORTHO05D006490 9.0e-72 275.0 326 44.8
Sabra07G0090700 Salix brachista HOM05D005030 ORTHO05D006490 5.8e-71 272.3 351 43.3
Mapoly0047s0105 Marchantia polymorpha HOM05D005030 ORTHO05D006490 7.6e-71 271.9 327 45.3
Lalb_Chr13g0296501 Lupinus albus HOM05D005030 ORTHO05D006490 2.2e-70 270.4 326 44.5
ClCG01G015590 Citrullus lanatus HOM05D005030 ORTHO05D006490 6.4e-70 268.9 326 43.9
CiPaw.03G127600 Carya illinoinensis HOM05D005030 ORTHO05D006490 1.1e-69 268.1 326 43.3
Lalb_Chr12g0203281 Lupinus albus HOM05D005030 ORTHO05D006490 2.4e-69 266.9 330 43.9
CANSAT01G2434 Cannabis sativa HOM05D005030 ORTHO05D006490 5.4e-69 265.8 326 46.0
Glyma.08G147000 Glycine max HOM05D005030 ORTHO05D006490 7.1e-69 265.4 326 43.3
Cpa.g.sc42.107 Carica papaya HOM05D005030 ORTHO05D006490 1.2e-68 264.6 326 45.1
Haze_25140 Corylus avellana HOM05D005030 ORTHO05D006490 2.7e-68 263.5 267 47.9
AagrBONN_evm.TU.Sc2ySwM_228.5700 Anthoceros agrestis HOM05D005030 ORTHO05D006490 3.0e-67 260.0 334 44.3
arahy.Tifrunner.gnm1.ann1.CRY23I Arachis hypogaea HOM05D005030 ORTHO05D006490 5.1e-67 259.2 326 42.0
EL10Ac6g15267 Beta vulgaris HOM05D005030 ORTHO05D006490 9.6e-66 255.0 264 48.5
MD17G1248700 Malus domestica HOM05D005030 ORTHO05D000105 9.6e-66 255.0 296 45.3
arahy.Tifrunner.gnm1.ann1.HR53B8 Arachis hypogaea HOM05D005030 ORTHO05D006490 2.8e-65 253.4 326 41.7
CDE08G0761 Ceratophyllum demersum HOM05D005030 ORTHO05D006490 4.8e-65 252.7 267 46.4
Lj4g0022240 Lotus japonicus HOM05D005030 ORTHO05D006490 8.1e-65 251.9 326 42.0
Oeu037792.2 Olea europaea HOM05D005030 ORTHO05D006490 8.1e-65 251.9 326 43.9
CiPaw.03G127500 Carya illinoinensis HOM05D005030 ORTHO05D006490 4.0e-64 249.6 326 41.1
Carub.0003s1851 Capsella rubella HOM05D005030 ORTHO05D006490 2.0e-63 247.3 326 41.7
Pp3c6_6440 Physcomitrium patens HOM05D005030 ORTHO05D006490 1.3e-62 244.6 294 44.2
SMO203G0163 Selaginella moellendorffii HOM05D005030 ORTHO05D006490 3.8e-62 243.0 330 40.9
Dinv05712 Davidia involucrata HOM05D005030 ORTHO05D006490 7.9e-60 235.3 288 44.4
Cc07_g17780 Coffea canephora HOM05D005030 ORTHO05D006490 6.5e-54 215.7 294 39.8
ECA234G2315 Erigeron canadensis HOM05D005030 ORTHO05D006490 1.2e-52 211.5 292 38.0
Rhsim10G0138800 Rhododendron simsii HOM05D005030 ORTHO05D006490 1.6e-52 211.1 273 43.2
COL.COLO4_13999 Corchorus olitorius HOM05D005030 ORTHO05D006490 3.3e-50 203.4 326 37.7
FAN23G1614 Fragaria x ananassa HOM05D005030 ORTHO05D006490 6.1e-36 156.0 308 36.7
TAR625G0665 Trochodendron aralioides HOM05D005030 ORTHO05D006490 5.5e-29 132.9 114 51.8
ECA234G1901 Erigeron canadensis HOM05D005030 ORTHO05D006490 7.4e-26 122.5 253 32.0
CBR_g61481 Chara braunii HOM05D005030 ORTHO05D001575 4.2e-21 106.7 339 26.5
TAR381G0402 Trochodendron aralioides HOM05D005030 ORTHO05D006490 2.1e-20 104.4 129 45.7
CBR_g36663 Chara braunii HOM05D005030 ORTHO05D006490 5.9e-15 86.3 313 25.9
Sopen11g004310 Solanum pennellii HOM05D000399 ORTHO05D000304 1.5e-13 81.6 81 53.1


User provided reference genes

Program Settings