Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_15011 Sequoiadendron giganteum HOM05D003546 ORTHO05D005667 2.6e-47 191.8 102 100.0
SEGI_24352 Sequoiadendron giganteum HOM05D003546 ORTHO05D005667 2.6e-47 191.8 102 100.0
Cpa.g.sc77.106 Carica papaya HOM05D003546 ORTHO05D005667 2.2e-22 109.0 84 63.1
Sabra11G0100300 Salix brachista HOM05D003546 ORTHO05D005667 2.8e-22 108.6 73 72.6
Aqoxy1G01847 Aquilegia oxysepala HOM05D003546 ORTHO05D005667 4.9e-22 107.8 82 64.6
SalBow8G3953 Salvia bowleyana HOM05D003546 ORTHO05D005667 6.3e-22 107.5 74 70.3
Sc03g0010770 Simmondsia chinensis HOM05D003546 ORTHO05D005667 6.3e-22 107.5 76 68.4
TAR629G0142 Trochodendron aralioides HOM05D003546 ORTHO05D005667 8.3e-22 107.1 73 71.2
Nn3g20902 Nelumbo nucifera HOM05D003546 ORTHO05D005667 1.1e-21 106.7 73 71.2
Peaxi162Scf00111g01221 Petunia axillaris HOM05D003546 ORTHO05D005667 1.1e-21 106.7 78 66.7
Potri.011G114100 Populus trichocarpa HOM05D003546 ORTHO05D005667 1.1e-21 106.7 77 70.1
Glyma.13G263400 Glycine max HOM05D003546 ORTHO05D005667 1.4e-21 106.3 77 66.2
MD11G1273100 Malus domestica HOM05D003546 ORTHO05D005667 1.4e-21 106.3 73 69.9
Actinidia12611 Actinidia chinensis HOM05D003546 ORTHO05D005667 2.4e-21 105.5 77 68.8
Dinv26695 Davidia involucrata HOM05D003546 ORTHO05D005667 2.4e-21 105.5 77 64.9
Oeu058446.1 Olea europaea HOM05D003546 ORTHO05D005667 2.4e-21 105.5 74 68.9
BcaB07g34045 Brassica carinata HOM05D003546 ORTHO05D005667 3.1e-21 105.1 73 68.5
FAN21G0932 Fragaria x ananassa HOM05D003546 ORTHO05D005667 3.1e-21 105.1 73 68.5
Sp1g15310 Schrenkiella parvula HOM05D003546 ORTHO05D005667 3.1e-21 105.1 81 65.4
Aa31LG7G2010 Aethionema arabicum HOM05D003546 ORTHO05D005667 4.1e-21 104.8 73 69.9
CARHR017740 Cardamine hirsuta HOM05D003546 ORTHO05D005667 4.1e-21 104.8 73 69.9
ClCG07G010350 Citrullus lanatus HOM05D003546 ORTHO05D005667 4.1e-21 104.8 79 67.1
Thhalv10007918m.g Eutrema salsugineum HOM05D003546 ORTHO05D005667 4.1e-21 104.8 73 69.9
Glyma.13G263300 Glycine max HOM05D003546 ORTHO05D005667 4.1e-21 104.8 63 76.2
A06p13070 Brassica napus HOM05D003546 ORTHO05D005667 5.4e-21 104.4 75 69.3
BraA06t24467Z Brassica rapa HOM05D003546 ORTHO05D005667 5.4e-21 104.4 75 69.3
Migut.G00787 Erythranthe guttata HOM05D003546 ORTHO05D005667 5.4e-21 104.4 73 69.9
AUR62013937 Chenopodium quinoa HOM05D003546 ORTHO05D005667 7.0e-21 104.0 79 65.8
Duzib213G0800 Durio zibethinus HOM05D003546 ORTHO05D005667 7.0e-21 104.0 73 68.5
Lalb_Chr25g0285581 Lupinus albus HOM05D003546 ORTHO05D005667 7.0e-21 104.0 71 70.4
Manes.15G101700 Manihot esculenta HOM05D003546 ORTHO05D005667 7.0e-21 104.0 74 67.6
Sed0005020 Sechium edule HOM05D003546 ORTHO05D005667 7.0e-21 104.0 73 71.2
Cfa019500 Carpinus fangiana HOM05D003546 ORTHO05D005667 9.2e-21 103.6 73 68.5
Haze_08456 Corylus avellana HOM05D003546 ORTHO05D005667 9.2e-21 103.6 73 68.5
FvH4_3g17420 Fragaria vesca HOM05D003546 ORTHO05D005667 9.2e-21 103.6 73 67.1
FAN11G2746 Fragaria x ananassa HOM05D003546 ORTHO05D005667 9.2e-21 103.6 73 67.1
FAN16G1735 Fragaria x ananassa HOM05D003546 ORTHO05D005667 9.2e-21 103.6 73 67.1
PSO541G1993 Papaver somniferum HOM05D003546 ORTHO05D005667 9.2e-21 103.6 73 68.5
PSO675G0773 Papaver somniferum HOM05D003546 ORTHO05D005667 9.2e-21 103.6 73 68.5
SGA_v2.0_scaffold73G24377 Striga asiatica HOM05D003546 ORTHO05D005667 9.2e-21 103.6 73 68.5
THA.LOC104812287 Tarenaya hassleriana HOM05D003546 ORTHO05D005667 9.2e-21 103.6 59 83.1
AL1G29390 Arabidopsis lyrata HOM05D003546 ORTHO05D005667 1.2e-20 103.2 73 68.5
AT1G17160 Arabidopsis thaliana HOM05D003546 ORTHO05D005667 1.2e-20 103.2 73 68.5
BcaC07g41403 Brassica carinata HOM05D003546 ORTHO05D005667 1.2e-20 103.2 73 67.1
Carub.0001s1691 Capsella rubella HOM05D003546 ORTHO05D005667 1.2e-20 103.2 73 68.5
MELO3C016138.2 Cucumis melo HOM05D003546 ORTHO05D005667 1.2e-20 103.2 73 68.5
DCAR_021047 Daucus carota HOM05D003546 ORTHO05D005667 1.2e-20 103.2 78 65.4
Mapoly0014s0091 Marchantia polymorpha HOM05D003546 ORTHO05D005667 1.2e-20 103.2 61 82.0
Nitab4.5_0001140g0050 Nicotiana tabacum HOM05D003546 ORTHO05D005667 1.2e-20 103.2 73 68.5
Solyc07g062070.3 Solanum lycopersicum HOM05D003546 ORTHO05D005667 1.2e-20 103.2 73 69.9
Sopen07g030330 Solanum pennellii HOM05D003546 ORTHO05D005667 1.2e-20 103.2 73 69.9
AUR62019676 Chenopodium quinoa HOM05D003546 ORTHO05D005667 1.6e-20 102.8 77 66.2
Glyma.15G240800 Glycine max HOM05D003546 ORTHO05D005667 1.6e-20 102.8 60 78.3
Gohir.A08G234000 Gossypium hirsutum HOM05D003546 ORTHO05D005667 1.6e-20 102.8 73 68.5
Gohir.D08G254200 Gossypium hirsutum HOM05D003546 ORTHO05D005667 1.6e-20 102.8 73 68.5
Gorai.004G271100 Gossypium raimondii HOM05D003546 ORTHO05D005667 1.6e-20 102.8 73 68.5
Prupe.4G154400 Prunus persica HOM05D003546 ORTHO05D005667 1.6e-20 102.8 71 70.4
Sed0015060 Sechium edule HOM05D003546 ORTHO05D005667 1.6e-20 102.8 73 69.9
Ah.06g187600 Amaranthus hybridus HOM05D000137 ORTHO05D000503 2.0e-20 102.4 71 69.0
BcaC05g25661 Brassica carinata HOM05D003546 ORTHO05D005667 2.0e-20 102.4 75 68.0
BolC5t30265H Brassica oleracea HOM05D003546 ORTHO05D005667 2.0e-20 102.4 75 68.0
CiPaw.11G154600 Carya illinoinensis HOM05D003546 ORTHO05D005667 2.0e-20 102.4 78 62.8
Lj3g0000931 Lotus japonicus HOM05D003546 ORTHO05D005667 2.0e-20 102.4 73 65.8
CANSAT56G3227 Cannabis sativa HOM05D003546 ORTHO05D005667 2.7e-20 102.1 73 68.5
Eucgr.F03224 Eucalyptus grandis HOM05D003546 ORTHO05D005667 2.7e-20 102.1 73 67.1
Hund10394 Selenicereus undatus HOM05D003546 ORTHO05D005667 2.7e-20 102.1 83 61.4
Thecc.07G148500 Theobroma cacao HOM05D003546 ORTHO05D005667 2.7e-20 102.1 73 68.5
VMungo1080G0318 Vigna mungo HOM05D003546 ORTHO05D005667 2.7e-20 102.1 57 84.2
C05p15580 Brassica napus HOM05D003546 ORTHO05D005667 3.5e-20 101.7 69 71.0
CsaV3_4G007980 Cucumis sativus L. HOM05D003546 ORTHO05D005667 3.5e-20 101.7 73 67.1
Lj8A144T67 Lonicera japonica HOM05D003546 ORTHO05D005667 3.5e-20 101.7 78 64.1
Nitab4.5_0003618g0070 Nicotiana tabacum HOM05D003546 ORTHO05D005667 3.5e-20 101.7 73 67.1
RcHm_v2.0_Chr5g0028951 Rosa chinensis HOM05D003546 ORTHO05D005667 3.5e-20 101.7 71 67.6
PGSC0003DMG400007057 Solanum tuberosum HOM05D003546 ORTHO05D005667 3.5e-20 101.7 73 67.1
arahy.Tifrunner.gnm1.ann1.UIE2A5 Arachis hypogaea HOM05D003546 ORTHO05D005667 4.5e-20 101.3 64 73.4
COL.COLO4_17394 Corchorus olitorius HOM05D003546 ORTHO05D005667 4.5e-20 101.3 59 79.7
TWI38G2125 Tripterygium wilfordii HOM05D003546 ORTHO05D005667 4.5e-20 101.3 86 58.1
Atru.chr2.1822 Acer truncatum HOM05D003546 ORTHO05D005667 5.9e-20 100.9 69 69.6
arahy.Tifrunner.gnm1.ann1.Y31H1M Arachis hypogaea HOM05D003546 ORTHO05D005667 5.9e-20 100.9 64 73.4
Pp3c6_13210 Physcomitrium patens HOM05D003546 ORTHO05D005667 7.8e-20 100.5 71 70.4
THA.LOC104813974 Tarenaya hassleriana HOM05D003546 ORTHO05D005667 7.8e-20 100.5 90 57.8
arahy.Tifrunner.gnm1.ann1.T44SL9 Arachis hypogaea HOM05D003546 ORTHO05D005667 1.0e-19 100.1 64 71.9
CAN.G375.59 Capsicum annuum HOM05D003546 ORTHO05D005667 1.0e-19 100.1 73 65.8
ECA236G3331 Erigeron canadensis HOM05D003546 ORTHO05D005667 1.0e-19 100.1 82 61.0
Oeu010039.1 Olea europaea HOM05D003546 ORTHO05D005667 1.0e-19 100.1 60 76.7
TPR.G27299 Trifolium pratense HOM05D003546 ORTHO05D005667 1.0e-19 100.1 60 75.0
Psat1g007800 Pisum sativum HOM05D003546 ORTHO05D005667 1.3e-19 99.8 60 75.0
Lsat_1_v5_gn_7_100340 Lactuca sativa HOM05D003546 ORTHO05D005667 1.7e-19 99.4 77 61.0
Medtr2g072830 Medicago truncatula HOM05D003546 ORTHO05D005667 1.7e-19 99.4 60 75.0
vmacro11984 Vaccinium macrocarpon HOM05D003546 ORTHO05D005667 1.7e-19 99.4 73 64.4
HanXRQChr15g0495341 Helianthus annuus HOM05D003546 ORTHO05D005667 2.3e-19 99.0 74 64.9
PGR031G2804 Punica granatum HOM05D003546 ORTHO05D005667 2.3e-19 99.0 60 76.7
Rhsim06G0213200 Rhododendron simsii HOM05D003546 ORTHO05D005667 2.3e-19 99.0 77 62.3
SMO163G0088 Selaginella moellendorffii HOM05D003546 ORTHO05D005667 2.9e-19 98.6 57 82.5
ATR0256G001 Amborella trichopoda HOM05D003546 ORTHO05D005667 3.8e-19 98.2 81 64.2
CDE02G3780 Ceratophyllum demersum HOM05D003546 ORTHO05D005667 3.8e-19 98.2 78 62.8
Pp3c5_14610 Physcomitrium patens HOM05D000518 ORTHO05D005667 3.8e-19 98.2 69 72.5
HPP92_024629 Vanilla planifolia HOM05D003546 ORTHO05D005667 3.8e-19 98.2 71 67.6
AagrBONN_evm.TU.Sc2ySwM_344.5210 Anthoceros agrestis HOM05D003546 ORTHO05D005667 5.0e-19 97.8 76 60.5
MSTRG.6697 Avicennia marina HOM05D003546 ORTHO05D005667 6.6e-19 97.4 72 65.3
CSS0041975 Camellia sinensis var. sinensis HOM05D003546 ORTHO05D005667 6.6e-19 97.4 59 76.3
Ciclev10020632m.g Citrus clementina HOM05D003546 ORTHO05D005667 6.6e-19 97.4 76 63.2
Hma1.2p1_0713F.1_g207830 Hydrangea macrophylla HOM05D003546 ORTHO05D005667 6.6e-19 97.4 60 75.0
Phvul.005G070000 Phaseolus vulgaris HOM05D003546 ORTHO05D005667 6.6e-19 97.4 63 71.4
QL08p024489 Quercus lobata HOM05D003546 ORTHO05D005667 6.6e-19 97.4 74 63.5
SMO119G0495 Selaginella moellendorffii HOM05D003546 ORTHO05D005667 6.6e-19 97.4 57 80.7
VMungo1080G1435 Vigna mungo HOM05D003546 ORTHO05D005667 1.1e-18 96.7 63 71.4
Ca_03453_v3 Cicer arietinum L. HOM05D003546 ORTHO05D005667 1.5e-18 96.3 59 71.2
Rhsim06G0212800 Rhododendron simsii HOM05D003546 ORTHO05D005667 7.3e-18 94.0 69 62.3
SHI19235 Sapria himalayana HOM05D003546 ORTHO05D005667 1.5e-15 86.3 74 58.1
Zm00001eb359730 Zea mays HOM05D003546 ORTHO05D005667 2.6e-15 85.5 60 73.3
CBR_g61469 Chara braunii HOM05D003546 ORTHO05D005667 4.4e-15 84.7 57 71.9
Os01g0665400 Oryza sativa ssp. japonica HOM05D003546 ORTHO05D005667 9.8e-15 83.6 58 74.1
Aqoxy4G00144 Aquilegia oxysepala HOM05D003546 ORTHO05D005667 1.1e-13 80.1 61 60.7
Cre10.g424500 Chlamydomonas reinhardtii HOM05D003546 ORTHO05D005667 7.8e-12 73.9 57 59.6
SMO111G0185 Selaginella moellendorffii HOM05D002451 ORTHO05D005601 1.1e-08 63.5 71 45.1
Phvul.005G070200 Phaseolus vulgaris HOM05D003546 ORTHO05D005667 9.8e-07 57.0 56 51.8


User provided reference genes

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