Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_24160 Sequoiadendron giganteum HOM05D002263 ORTHO05D003537 1.5e-127 459.5 235 100.0
SEGI_10251 Sequoiadendron giganteum HOM05D002263 ORTHO05D003537 6.6e-22 108.6 106 63.2
SEGI_32368 Sequoiadendron giganteum HOM05D002263 ORTHO05D003537 1.6e-15 87.4 106 56.6
arahy.Tifrunner.gnm1.ann1.ES5MTE Arachis hypogaea HOM05D002263 ORTHO05D003537 1.1e-08 64.7 108 43.5
ATR0332G038 Amborella trichopoda HOM05D002263 ORTHO05D003537 1.9e-08 63.9 103 43.7
arahy.Tifrunner.gnm1.ann1.CKFG51 Arachis hypogaea HOM05D002263 ORTHO05D003537 2.4e-08 63.5 112 43.8
CAN.G219.44 Capsicum annuum HOM05D002263 ORTHO05D003537 2.4e-08 63.5 99 46.5
PGSC0003DMG400006793 Solanum tuberosum HOM05D002263 ORTHO05D003537 3.2e-08 63.2 99 45.5
Solyc01g087500.3 Solanum lycopersicum HOM05D002263 ORTHO05D003537 5.4e-08 62.4 100 45.0
MELO3C023986.2 Cucumis melo HOM05D002263 ORTHO05D003537 1.2e-07 61.2 98 40.8
CsaV3_3G032050 Cucumis sativus L. HOM05D002263 ORTHO05D003537 1.2e-07 61.2 98 40.8
ClCG10G012270 Citrullus lanatus HOM05D002263 ORTHO05D003537 1.6e-07 60.8 99 43.4
Peaxi162Scf00744g00349 Petunia axillaris HOM05D002263 ORTHO05D003537 1.6e-07 60.8 99 44.4
Atru.chr11.2587 Acer truncatum HOM05D002263 ORTHO05D003537 2.0e-07 60.5 35 77.1
Lj3g0016100 Lotus japonicus HOM05D002263 ORTHO05D003537 2.0e-07 60.5 103 42.7
BcaNung00438 Brassica carinata HOM05D002263 ORTHO05D003537 2.7e-07 60.1 96 43.8
Oeu049493.1 Olea europaea HOM05D002263 ORTHO05D003537 2.7e-07 60.1 52 59.6
QL04p008074 Quercus lobata HOM05D002263 ORTHO05D003537 2.7e-07 60.1 80 45.0
QL04p008574 Quercus lobata HOM05D002263 ORTHO05D003537 2.7e-07 60.1 80 45.0
Sed0024297 Sechium edule HOM05D002263 ORTHO05D003537 2.7e-07 60.1 99 41.4
THA.LOC104820131 Tarenaya hassleriana HOM05D002263 ORTHO05D003537 2.7e-07 60.1 94 44.7
HPP92_014707 Vanilla planifolia HOM05D002263 ORTHO05D003537 2.7e-07 60.1 103 41.7
Potri.009G058900 Populus trichocarpa HOM05D002263 ORTHO05D003537 3.5e-07 59.7 35 74.3
Potri.001G264000 Populus trichocarpa HOM05D002263 ORTHO05D003537 4.6e-07 59.3 99 46.5
Sed0008745 Sechium edule HOM05D002263 ORTHO05D003537 4.6e-07 59.3 99 41.4
Sc16g0001930 Simmondsia chinensis HOM05D002263 ORTHO05D003537 4.6e-07 59.3 52 55.8
Sopen01g034420 Solanum pennellii HOM05D002263 ORTHO05D003537 6.0e-07 58.9 99 43.4
Ca_14467_v3 Cicer arietinum L. HOM05D002263 ORTHO05D003537 7.8e-07 58.5 35 74.3
Cc02_g28170 Coffea canephora HOM05D002263 ORTHO05D003537 7.8e-07 58.5 105 46.7
Gohir.A10G219600 Gossypium hirsutum HOM05D002263 ORTHO05D003537 7.8e-07 58.5 35 74.3
Gohir.D10G229100 Gossypium hirsutum HOM05D002263 ORTHO05D003537 7.8e-07 58.5 35 74.3
Gorai.011G261600 Gossypium raimondii HOM05D002263 ORTHO05D003537 7.8e-07 58.5 35 74.3
MD02G1308000 Malus domestica HOM05D002263 ORTHO05D003537 7.8e-07 58.5 106 42.5
Thecc.10G041300 Theobroma cacao HOM05D002263 ORTHO05D003537 7.8e-07 58.5 35 74.3
TWI73G0071 Tripterygium wilfordii HOM05D002263 ORTHO05D003537 7.8e-07 58.5 99 43.4
unitig_22.g5326 Utricularia gibba HOM05D002263 ORTHO05D003537 7.8e-07 58.5 36 77.8
Ciclev10030505m.g Citrus clementina HOM05D002263 ORTHO05D003537 1.0e-06 58.2 35 71.4
Eucgr.H02748 Eucalyptus grandis HOM05D002263 ORTHO05D003537 1.0e-06 58.2 35 74.3
Psat0s825g0040 Pisum sativum HOM05D002263 ORTHO05D003537 1.0e-06 58.2 35 71.4
Sed0003769 Sechium edule HOM05D002263 ORTHO05D003537 1.0e-06 58.2 100 40.0
vmacro14860 Vaccinium macrocarpon HOM05D002263 ORTHO05D003537 1.0e-06 58.2 37 70.3
GSVIVG01032138001 Vitis vinifera HOM05D002263 ORTHO05D003537 1.0e-06 58.2 35 71.4
Eucgr.H02633 Eucalyptus grandis HOM05D002263 ORTHO05D003537 1.3e-06 57.8 35 71.4
Hma1.2p1_2160F.1_g315570 Hydrangea macrophylla HOM05D002263 ORTHO05D003537 1.3e-06 57.8 100 40.0
Nn7g36258 Nelumbo nucifera HOM05D002263 ORTHO05D003537 1.3e-06 57.8 103 43.7
Zm00001eb188030 Zea mays HOM05D002263 ORTHO05D003537 1.3e-06 57.8 93 40.9
HanXRQChr14g0447821 Helianthus annuus HOM05D002263 ORTHO05D003537 1.7e-06 57.4 35 77.1
Rhsim01G0127100 Rhododendron simsii HOM05D002263 ORTHO05D003537 1.7e-06 57.4 37 70.3
Rhsim01G0128300 Rhododendron simsii HOM05D002263 ORTHO05D003537 1.7e-06 57.4 37 70.3
Sabra16G0162200 Salix brachista HOM05D002263 ORTHO05D016312 1.7e-06 57.4 33 75.8
Hund15422 Selenicereus undatus HOM05D002263 ORTHO05D003537 1.7e-06 57.4 34 73.5
AL3G38880 Arabidopsis lyrata HOM05D002263 ORTHO05D003537 2.3e-06 57.0 98 43.9
MSTRG.20571 Avicennia marina HOM05D002263 ORTHO05D003537 2.3e-06 57.0 35 77.1
CANSAT80G1724 Cannabis sativa HOM05D002263 ORTHO05D003537 2.3e-06 57.0 98 41.8
Duzib106G1002 Durio zibethinus HOM05D002263 ORTHO05D003537 2.3e-06 57.0 35 71.4
ECA248G0809 Erigeron canadensis HOM05D002263 ORTHO05D003537 2.3e-06 57.0 37 70.3
Migut.B01281 Erythranthe guttata HOM05D002263 ORTHO05D003537 2.3e-06 57.0 35 74.3
Lsat_1_v5_gn_1_105720 Lactuca sativa HOM05D002263 ORTHO05D003537 2.3e-06 57.0 35 74.3
MD07G1017700 Malus domestica HOM05D002263 ORTHO05D003537 2.3e-06 57.0 105 41.9
Sabra09G0043200 Salix brachista HOM05D002263 ORTHO05D003537 2.3e-06 57.0 35 71.4
SalBow5G1665 Salvia bowleyana HOM05D002263 ORTHO05D003537 2.3e-06 57.0 35 71.4
TAR369G0754 Trochodendron aralioides HOM05D002263 ORTHO05D003537 2.3e-06 57.0 103 41.7
CSS0021570 Camellia sinensis var. sinensis HOM05D002263 ORTHO05D003537 3.0e-06 56.6 105 41.9
CSS0033402 Camellia sinensis var. sinensis HOM05D002263 ORTHO05D003537 3.0e-06 56.6 105 41.9
Psat7g085320 Pisum sativum HOM05D002263 ORTHO05D003537 3.0e-06 56.6 97 45.4
unitig_8.g3777 Utricularia gibba HOM05D002263 ORTHO05D003537 3.0e-06 56.6 35 77.1
FvH4_7g01280 Fragaria vesca HOM05D002263 ORTHO05D003537 3.9e-06 56.2 99 41.4
HanXRQChr01g0016471 Helianthus annuus HOM05D002263 ORTHO05D003537 3.9e-06 56.2 35 74.3
Actinidia31076 Actinidia chinensis HOM05D002263 ORTHO05D003537 5.0e-06 55.8 37 62.2
CiPaw.14G001600 Carya illinoinensis HOM05D002263 ORTHO05D003537 5.0e-06 55.8 101 39.6
AUR62009398 Chenopodium quinoa HOM05D002263 ORTHO05D003537 5.0e-06 55.8 34 70.6
AUR62023080 Chenopodium quinoa HOM05D002263 ORTHO05D003537 5.0e-06 55.8 34 70.6
DCAR_022381 Daucus carota HOM05D002263 ORTHO05D003537 5.0e-06 55.8 52 50.0
FAN01G0038 Fragaria x ananassa HOM05D002263 ORTHO05D003537 5.0e-06 55.8 99 41.4
FAN03G0380 Fragaria x ananassa HOM05D002263 ORTHO05D003537 5.0e-06 55.8 99 41.4
FAN06G0127 Fragaria x ananassa HOM05D002263 ORTHO05D003537 5.0e-06 55.8 99 41.4
FAN10G1377 Fragaria x ananassa HOM05D002263 ORTHO05D003537 5.0e-06 55.8 99 41.4
Glyma.15G276000 Glycine max HOM05D002263 ORTHO05D003537 5.0e-06 55.8 95 37.9
Medtr3g031040 Medicago truncatula HOM05D002263 ORTHO05D003537 5.0e-06 55.8 35 71.4
Nn2g15271 Nelumbo nucifera HOM05D002263 ORTHO05D003537 5.0e-06 55.8 103 42.7
Nitab4.5_0000707g0240 Nicotiana tabacum HOM05D002263 ORTHO05D003537 5.0e-06 55.8 99 43.4
Nitab4.5_0002918g0080 Nicotiana tabacum HOM05D002263 ORTHO05D003537 5.0e-06 55.8 99 43.4
Oeu049004.1 Olea europaea HOM05D002263 ORTHO05D003537 5.0e-06 55.8 35 74.3
TPR.G27843 Trifolium pratense HOM05D002263 ORTHO05D003537 5.0e-06 55.8 35 71.4
CARHR061100 Cardamine hirsuta HOM05D002263 ORTHO05D003537 6.6e-06 55.5 98 42.9
CiPaw.05G149100 Carya illinoinensis HOM05D002263 ORTHO05D003537 6.6e-06 55.5 101 38.6
Dinv43424 Davidia involucrata HOM05D002263 ORTHO05D003537 6.6e-06 55.5 107 42.1
MBI02_g23141_MAGBIO Magnolia biondii HOM05D002263 ORTHO05D003537 6.6e-06 55.5 35 68.6
Os02g0699700 Oryza sativa ssp. japonica HOM05D002263 ORTHO05D003537 6.6e-06 55.5 37 67.6
PGR031G1196 Punica granatum HOM05D002263 ORTHO05D003537 6.6e-06 55.5 103 41.7
SGA_v2.0_scaffold119G32746 Striga asiatica HOM05D002263 ORTHO05D003537 6.6e-06 55.5 95 43.2
Zm00001eb251620 Zea mays HOM05D002263 ORTHO05D003537 6.6e-06 55.5 92 38.0
CDE10G0015 Ceratophyllum demersum HOM05D002263 ORTHO05D003537 8.6e-06 55.1 101 41.6
Psat0s797g0200 Pisum sativum HOM05D002263 ORTHO05D003537 8.6e-06 55.1 35 65.7
TWI09G0750 Tripterygium wilfordii HOM05D002263 ORTHO05D003537 8.6e-06 55.1 99 43.4


User provided reference genes

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