Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23330 Sequoiadendron giganteum HOM05D000124 ORTHO05D000056 3.1e-94 348.6 194 100.0
SEGI_35963 Sequoiadendron giganteum HOM05D000124 ORTHO05D000056 6.8e-25 118.2 169 47.3
TAR623G1013 Trochodendron aralioides HOM05D000124 ORTHO05D000056 1.4e-14 84.0 177 37.3
MBI10_g44021_MAGBIO Magnolia biondii HOM05D000124 ORTHO05D000056 5.6e-11 72.0 221 32.6
TAR369G0218 Trochodendron aralioides HOM05D000124 ORTHO05D000056 8.1e-10 68.2 79 46.8
Lj2g0007811 Lotus japonicus HOM05D000124 ORTHO05D000056 5.3e-09 65.5 99 37.4
Sp4g26940 Schrenkiella parvula HOM05D000124 ORTHO05D000056 5.3e-09 65.5 96 37.5
PSO063G6169 Papaver somniferum HOM05D000124 ORTHO05D000056 1.2e-08 64.3 88 43.2
CSS0002695 Camellia sinensis var. sinensis HOM05D000124 ORTHO05D000056 3.4e-08 62.8 99 41.4
CSS0027366 Camellia sinensis var. sinensis HOM05D000124 ORTHO05D000056 3.4e-08 62.8 99 41.4
Migut.F00528 Erythranthe guttata HOM05D000124 ORTHO05D000056 3.4e-08 62.8 112 37.5
Duzib205G1928 Durio zibethinus HOM05D000124 ORTHO05D000056 7.6e-08 61.6 93 39.8
Gohir.D12G216900 Gossypium hirsutum HOM05D000124 ORTHO05D000056 9.9e-08 61.2 87 40.2
PGSC0003DMG400010750 Solanum tuberosum HOM05D000124 ORTHO05D000056 1.3e-07 60.8 92 44.6
Ciclev10021652m.g Citrus clementina HOM05D000124 ORTHO05D000056 1.7e-07 60.5 87 40.2
SEGI_18858 Sequoiadendron giganteum HOM05D000124 ORTHO05D000056 1.7e-07 60.5 70 50.0
Gorai.006G214100 Gossypium raimondii HOM05D000124 ORTHO05D000056 2.2e-07 60.1 93 37.6
Nitab4.5_0002271g0010 Nicotiana tabacum HOM05D000124 ORTHO05D000056 2.2e-07 60.1 85 41.2
Sopen03g024430 Solanum pennellii HOM05D000124 ORTHO05D000056 2.2e-07 60.1 88 40.9
CSS0009327 Camellia sinensis var. sinensis HOM05D000124 ORTHO05D000056 2.9e-07 59.7 76 46.1
Dinv16870 Davidia involucrata HOM05D000124 ORTHO05D000056 2.9e-07 59.7 100 42.0
Oeu045803.1 Olea europaea HOM05D000124 ORTHO05D000056 2.9e-07 59.7 124 35.5
SalBow3G0346 Salvia bowleyana HOM05D000124 ORTHO05D000056 2.9e-07 59.7 75 45.3
SalBow3G0583 Salvia bowleyana HOM05D000124 ORTHO05D000056 2.9e-07 59.7 75 45.3
A08p13180 Brassica napus HOM05D000124 ORTHO05D000056 3.8e-07 59.3 93 39.8
CSS0000733 Camellia sinensis var. sinensis HOM05D000124 ORTHO05D000056 3.8e-07 59.3 74 44.6
Nitab4.5_0000600g0080 Nicotiana tabacum HOM05D000124 ORTHO05D000056 3.8e-07 59.3 92 40.2
PSO339G5219 Papaver somniferum HOM05D000124 ORTHO05D000056 3.8e-07 59.3 139 32.4
Ah.12g054440 Amaranthus hybridus HOM05D000124 ORTHO05D000056 4.9e-07 58.9 92 34.8
AT2G44840 Arabidopsis thaliana HOM05D000124 ORTHO05D000056 4.9e-07 58.9 95 36.8
ECA232G1064 Erigeron canadensis HOM05D000124 ORTHO05D000056 4.9e-07 58.9 91 39.6
ECA238G4777 Erigeron canadensis HOM05D000124 ORTHO05D000056 4.9e-07 58.9 94 39.4
Gohir.D09G191300 Gossypium hirsutum HOM05D000124 ORTHO05D000056 4.9e-07 58.9 93 38.7
MD06G1051800 Malus domestica HOM05D000124 ORTHO05D000056 4.9e-07 58.9 103 37.9
THA.LOC104812812 Tarenaya hassleriana HOM05D000124 ORTHO05D000056 4.9e-07 58.9 100 38.0
AL4G43930 Arabidopsis lyrata HOM05D000124 ORTHO05D000056 6.4e-07 58.5 104 33.7
MSTRG.8405 Avicennia marina HOM05D000124 ORTHO05D000056 6.4e-07 58.5 90 37.8
BraA05t19475Z Brassica rapa HOM05D000124 ORTHO05D000056 6.4e-07 58.5 89 37.1
Carub.0004s2742 Capsella rubella HOM05D000124 ORTHO05D000056 6.4e-07 58.5 89 37.1
Gohir.A12G214300 Gossypium hirsutum HOM05D000124 ORTHO05D000056 6.4e-07 58.5 94 39.4
Gorai.008G232500 Gossypium raimondii HOM05D000124 ORTHO05D000056 6.4e-07 58.5 94 39.4
Peaxi162Scf00167g00082 Petunia axillaris HOM05D000124 ORTHO05D000056 6.4e-07 58.5 93 37.6
Phvul.003G223686 Phaseolus vulgaris HOM05D000124 ORTHO05D000056 6.4e-07 58.5 109 36.7
Sc01g0008190 Simmondsia chinensis HOM05D000124 ORTHO05D000056 6.4e-07 58.5 91 38.5
THA.LOC104798359 Tarenaya hassleriana HOM05D000124 ORTHO05D000056 6.4e-07 58.5 91 38.5
Atru.chr9.1249 Acer truncatum HOM05D000124 ORTHO05D000056 8.4e-07 58.2 88 39.8
Actinidia31771 Actinidia chinensis HOM05D000124 ORTHO05D000056 8.4e-07 58.2 66 45.5
MSTRG.143 Avicennia marina HOM05D000124 ORTHO05D000056 8.4e-07 58.2 110 33.6
EL10Ac5g12314 Beta vulgaris HOM05D000124 ORTHO05D000056 8.4e-07 58.2 95 37.9
C01p11150 Brassica napus HOM05D000124 ORTHO05D000056 8.4e-07 58.2 93 38.7
BraA08t33298Z Brassica rapa HOM05D000124 ORTHO05D000056 8.4e-07 58.2 90 40.0
AUR62018879 Chenopodium quinoa HOM05D000124 ORTHO05D000056 8.4e-07 58.2 95 37.9
Hma1.2p1_0502F.1_g167730 Hydrangea macrophylla HOM05D000124 ORTHO05D000056 8.4e-07 58.2 102 35.3
Oeu060855.1 Olea europaea HOM05D000124 ORTHO05D000056 8.4e-07 58.2 76 39.5
BcaC07g38081 Brassica carinata HOM05D000124 ORTHO05D000056 1.1e-06 57.8 94 38.3
A05p05010 Brassica napus HOM05D000124 ORTHO05D000056 1.1e-06 57.8 89 37.1
BolC8t48489H Brassica oleracea HOM05D000124 ORTHO05D000056 1.1e-06 57.8 94 38.3
MD04G1058000 Malus domestica HOM05D000124 ORTHO05D000056 1.1e-06 57.8 103 37.9
Nn6g33833 Nelumbo nucifera HOM05D000124 ORTHO05D000056 1.1e-06 57.8 139 29.5
PGR042G3097 Punica granatum HOM05D000124 ORTHO05D000056 1.1e-06 57.8 90 37.8
Glyma.17G145400 Glycine max HOM05D000124 ORTHO05D000056 1.4e-06 57.4 103 36.9
Thecc.03G245000 Theobroma cacao HOM05D000124 ORTHO05D000056 1.4e-06 57.4 94 37.2
BcaC02g12265 Brassica carinata HOM05D000124 ORTHO05D000056 1.9e-06 57.0 103 33.0
BcaC09g51636 Brassica carinata HOM05D000124 ORTHO05D000056 1.9e-06 57.0 93 38.7
BcaNung00086 Brassica carinata HOM05D000124 ORTHO05D000056 1.9e-06 57.0 98 38.8
C04p05840 Brassica napus HOM05D000124 ORTHO05D000056 1.9e-06 57.0 103 33.0
BolC1t01080H Brassica oleracea HOM05D000124 ORTHO05D000056 1.9e-06 57.0 93 38.7
BolC4t22213H Brassica oleracea HOM05D000124 ORTHO05D000056 1.9e-06 57.0 103 33.0
CDE04G3134 Ceratophyllum demersum HOM05D000124 ORTHO05D000056 1.9e-06 57.0 61 50.8
AUR62007133 Chenopodium quinoa HOM05D000124 ORTHO05D000056 1.9e-06 57.0 95 37.9
Rhsim03G0161000 Rhododendron simsii HOM05D000124 ORTHO05D000056 1.9e-06 57.0 96 39.6
Sabra01G0123500 Salix brachista HOM05D000124 ORTHO05D000056 1.9e-06 57.0 94 34.0
A01p09580 Brassica napus HOM05D000124 ORTHO05D000056 2.4e-06 56.6 97 38.1
BraA01t00900Z Brassica rapa HOM05D000124 ORTHO05D000056 2.4e-06 56.6 97 38.1
COL.COLO4_10025 Corchorus olitorius HOM05D000124 ORTHO05D000056 2.4e-06 56.6 96 37.5
Haze_07958 Corylus avellana HOM05D000124 ORTHO05D000056 2.4e-06 56.6 53 50.9
Thhalv10027401m.g Eutrema salsugineum HOM05D000124 ORTHO05D000056 2.4e-06 56.6 96 36.5
MSTRG.8850 Avicennia marina HOM05D000124 ORTHO05D000056 3.2e-06 56.2 96 37.5
Duzib068G0862 Durio zibethinus HOM05D000124 ORTHO05D000056 3.2e-06 56.2 95 34.7
Gohir.A09G196700 Gossypium hirsutum HOM05D000124 ORTHO05D000056 3.2e-06 56.2 93 36.6
Nn1g00859 Nelumbo nucifera HOM05D000124 ORTHO05D000056 3.2e-06 56.2 113 32.7
Potri.001G154100 Populus trichocarpa HOM05D000124 ORTHO05D000056 3.2e-06 56.2 94 34.0
Sed0003306 Sechium edule HOM05D000124 ORTHO05D000056 3.2e-06 56.2 83 39.8
Solyc03g093610.1 Solanum lycopersicum HOM05D000124 ORTHO05D000056 3.2e-06 56.2 90 40.0
VMungo0251G3317 Vigna mungo HOM05D000124 ORTHO05D000056 3.2e-06 56.2 109 35.8
BcaB06g29402 Brassica carinata HOM05D000124 ORTHO05D000056 4.2e-06 55.8 83 39.8
Oeu042528.1 Olea europaea HOM05D000124 ORTHO05D000056 4.2e-06 55.8 97 38.1
Rhsim09G0189600 Rhododendron simsii HOM05D000124 ORTHO05D000056 4.2e-06 55.8 97 38.1
MSTRG.27223 Avicennia marina HOM05D000124 ORTHO05D000056 5.4e-06 55.5 103 35.9
Haze_07959 Corylus avellana HOM05D000124 ORTHO05D000056 5.4e-06 55.5 67 44.8
Duzib084G0693 Durio zibethinus HOM05D000124 ORTHO05D000056 5.4e-06 55.5 94 37.2
Prupe.5G061800 Prunus persica HOM05D000124 ORTHO05D000056 5.4e-06 55.5 108 35.2
SEGI_31247 Sequoiadendron giganteum HOM05D000124 ORTHO05D000056 5.4e-06 55.5 74 45.9
BcaB04g18424 Brassica carinata HOM05D000124 ORTHO05D000056 7.1e-06 55.1 95 35.8
A04p33510 Brassica napus HOM05D000124 ORTHO05D000056 7.1e-06 55.1 83 37.3
BraA04t18813Z Brassica rapa HOM05D000124 ORTHO05D000056 7.1e-06 55.1 83 37.3
CSS0035725 Camellia sinensis var. sinensis HOM05D000124 ORTHO05D000056 7.1e-06 55.1 96 37.5
Cfa012681 Carpinus fangiana HOM05D000124 ORTHO05D000056 7.1e-06 55.1 43 55.8
Gohir.A07G043700 Gossypium hirsutum HOM05D000124 ORTHO05D000056 7.1e-06 55.1 88 38.6
Lalb_Chr09g0324281 Lupinus albus HOM05D000124 ORTHO05D000056 7.1e-06 55.1 43 58.1
Medtr4g100380 Medicago truncatula HOM05D000124 ORTHO05D000056 7.1e-06 55.1 104 35.6
PGSC0003DMG400016006 Solanum tuberosum HOM05D000124 ORTHO05D000056 7.1e-06 55.1 90 41.1
Thecc.01G394100 Theobroma cacao HOM05D000124 ORTHO05D000056 7.1e-06 55.1 96 34.4
unitig_37.g12487 Utricularia gibba HOM05D000124 ORTHO05D000056 7.1e-06 55.1 71 42.3
Actinidia01043 Actinidia chinensis HOM05D000124 ORTHO05D000056 9.3e-06 54.7 70 45.7
CiPaw.11G084200 Carya illinoinensis HOM05D000124 ORTHO05D001134 9.3e-06 54.7 43 58.1
Glyma.05G063600 Glycine max HOM05D000124 ORTHO05D000056 9.3e-06 54.7 103 34.0
Gohir.D07G048100 Gossypium hirsutum HOM05D000124 ORTHO05D000056 9.3e-06 54.7 88 38.6
Gorai.001G051300 Gossypium raimondii HOM05D000124 ORTHO05D000056 9.3e-06 54.7 88 38.6
Lj4g0022438 Lotus japonicus HOM05D000124 ORTHO05D000056 9.3e-06 54.7 96 34.4
Lalb_Chr16g0386531 Lupinus albus HOM05D000124 ORTHO05D000056 9.3e-06 54.7 94 37.2
Sopen05g030600 Solanum pennellii HOM05D000124 ORTHO05D000056 9.3e-06 54.7 91 40.7
GSVIVG01013903001 Vitis vinifera HOM05D000124 ORTHO05D000056 9.3e-06 54.7 57 47.4


User provided reference genes

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