Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_22432 Sequoiadendron giganteum HOM05D004363 ORTHO05D005110 4.2e-124 448.0 218 100.0
SEGI_03324 Sequoiadendron giganteum HOM05D004363 ORTHO05D005110 8.3e-112 407.1 207 94.7
ATR0772G191 Amborella trichopoda HOM05D004363 ORTHO05D005110 1.8e-45 186.8 209 45.9
Aqoxy1G00638 Aquilegia oxysepala HOM05D004363 ORTHO05D005110 4.3e-44 182.2 208 45.2
Nn6g34649 Nelumbo nucifera HOM05D004363 ORTHO05D005110 2.8e-43 179.5 216 43.5
AagrBONN_evm.TU.Sc2ySwM_228.1566 Anthoceros agrestis HOM05D004363 ORTHO05D005110 6.3e-43 178.3 209 43.5
TAR628G0010 Trochodendron aralioides HOM05D004363 ORTHO05D005110 1.1e-42 177.6 207 45.9
TAR169G0003 Trochodendron aralioides HOM05D004363 ORTHO05D005110 1.8e-42 176.8 207 46.4
TAR623G0254 Trochodendron aralioides HOM05D004363 ORTHO05D005110 1.8e-42 176.8 207 46.4
TWI74G0412 Tripterygium wilfordii HOM05D004363 ORTHO05D005110 9.0e-42 174.5 209 45.0
TWI77G0878 Tripterygium wilfordii HOM05D004363 ORTHO05D005110 1.2e-41 174.1 209 44.5
Duzib093G0100 Durio zibethinus HOM05D004363 ORTHO05D005110 3.4e-41 172.6 207 45.4
Mapoly0053s0062 Marchantia polymorpha HOM05D004363 ORTHO05D005110 4.5e-41 172.2 209 44.0
Duzib128G0297 Durio zibethinus HOM05D004363 ORTHO05D005110 1.0e-40 171.0 207 44.4
MD12G1041600 Malus domestica HOM05D004363 ORTHO05D005110 1.0e-40 171.0 210 45.7
COL.COLO4_29546 Corchorus olitorius HOM05D004363 ORTHO05D005110 1.3e-40 170.6 202 46.0
Atru.chr8.1332 Acer truncatum HOM05D004363 ORTHO05D005110 2.2e-40 169.9 209 42.6
Gohir.A11G315700 Gossypium hirsutum HOM05D004363 ORTHO05D005110 2.2e-40 169.9 207 44.0
Gorai.007G363900 Gossypium raimondii HOM05D004363 ORTHO05D005110 3.8e-40 169.1 207 43.5
Sabra16G0069700 Salix brachista HOM05D004363 ORTHO05D005110 8.5e-40 167.9 207 44.9
Potri.016G068800 Populus trichocarpa HOM05D004363 ORTHO05D005110 1.4e-39 167.2 207 44.9
CANSAT64G2344 Cannabis sativa HOM05D004363 ORTHO05D005110 1.9e-39 166.8 209 41.6
Cfa020046 Carpinus fangiana HOM05D004363 ORTHO05D005110 1.9e-39 166.8 207 42.0
MD14G1040700 Malus domestica HOM05D004363 ORTHO05D005110 2.5e-39 166.4 210 43.8
DCAR_020694 Daucus carota HOM05D004363 ORTHO05D005110 3.2e-39 166.0 209 43.5
Gohir.D11G332900 Gossypium hirsutum HOM05D004363 ORTHO05D005110 3.2e-39 166.0 207 43.0
BcaB01g04994 Brassica carinata HOM05D004363 ORTHO05D005110 4.2e-39 165.6 209 43.5
GSVIVG01022591001 Vitis vinifera HOM05D004363 ORTHO05D005110 4.2e-39 165.6 209 44.0
Thecc.05G106200 Theobroma cacao HOM05D004363 ORTHO05D005110 5.5e-39 165.2 207 44.9
Aa31LG11G13340 Aethionema arabicum HOM05D004363 ORTHO05D005110 7.2e-39 164.9 207 42.0
Medtr7g106380 Medicago truncatula HOM05D004363 ORTHO05D005110 7.2e-39 164.9 208 41.3
Ciclev10010925m.g Citrus clementina HOM05D004363 ORTHO05D005110 1.2e-38 164.1 209 40.7
THA.LOC104820934 Tarenaya hassleriana HOM05D004363 ORTHO05D005110 1.2e-38 164.1 211 42.7
Carub.0006s1447 Capsella rubella HOM05D004363 ORTHO05D005110 1.6e-38 163.7 212 44.8
Eucgr.A02575 Eucalyptus grandis HOM05D004363 ORTHO05D005110 2.1e-38 163.3 207 43.5
Psat0s3922g0040 Pisum sativum HOM05D004363 ORTHO05D005110 2.7e-38 162.9 207 40.6
AL6G27170 Arabidopsis lyrata HOM05D004363 ORTHO05D005110 3.6e-38 162.5 212 43.9
VMungo1383G2497 Vigna mungo HOM05D004363 ORTHO05D005110 3.6e-38 162.5 207 41.1
EL10Ac5g11738 Beta vulgaris HOM05D004363 ORTHO05D005110 4.6e-38 162.2 207 43.0
FvH4_6g20450 Fragaria vesca HOM05D004363 ORTHO05D005110 6.1e-38 161.8 210 42.9
FAN05G3395 Fragaria x ananassa HOM05D004363 ORTHO05D005110 6.1e-38 161.8 210 42.4
FAN14G2782 Fragaria x ananassa HOM05D004363 ORTHO05D005110 6.1e-38 161.8 210 42.9
Gohir.A04G054800 Gossypium hirsutum HOM05D004363 ORTHO05D005110 6.1e-38 161.8 209 43.1
Prupe.7G093600 Prunus persica HOM05D004363 ORTHO05D005110 7.9e-38 161.4 207 44.9
Pp3c6_8810 Physcomitrium patens HOM05D004363 ORTHO05D005110 1.0e-37 161.0 209 42.1
Phvul.001G196200 Phaseolus vulgaris HOM05D004363 ORTHO05D005110 2.3e-37 159.8 207 40.1
Dinv31774 Davidia involucrata HOM05D004363 ORTHO05D005110 3.0e-37 159.5 209 42.1
Dinv12347 Davidia involucrata HOM05D004363 ORTHO05D005110 3.9e-37 159.1 205 43.4
Glyma.19G200400 Glycine max HOM05D004363 ORTHO05D005110 3.9e-37 159.1 207 42.5
Gohir.D04G092000 Gossypium hirsutum HOM05D004363 ORTHO05D005110 3.9e-37 159.1 209 42.1
Gorai.009G393900 Gossypium raimondii HOM05D004363 ORTHO05D005110 3.9e-37 159.1 209 42.1
arahy.Tifrunner.gnm1.ann1.KT4HPP Arachis hypogaea HOM05D004363 ORTHO05D005110 5.1e-37 158.7 208 40.9
CiPaw.10G018600 Carya illinoinensis HOM05D004363 ORTHO05D005110 5.1e-37 158.7 207 42.5
Lj1g0000064 Lotus japonicus HOM05D004363 ORTHO05D005110 5.1e-37 158.7 208 40.4
arahy.Tifrunner.gnm1.ann1.D60SL5 Arachis hypogaea HOM05D004363 ORTHO05D005110 6.7e-37 158.3 208 40.9
Migut.J00693 Erythranthe guttata HOM05D004363 ORTHO05D005110 6.7e-37 158.3 209 40.7
TPR.G31289 Trifolium pratense HOM05D004363 ORTHO05D005110 6.7e-37 158.3 207 40.1
Hund10860 Selenicereus undatus HOM05D004363 ORTHO05D005110 8.7e-37 157.9 207 43.0
Nitab4.5_0001191g0010 Nicotiana tabacum HOM05D004363 ORTHO05D005110 1.1e-36 157.5 209 41.1
PSO384G4461 Papaver somniferum HOM05D004363 ORTHO05D005110 1.1e-36 157.5 208 42.8
vmacro07483 Vaccinium macrocarpon HOM05D004363 ORTHO05D005110 1.1e-36 157.5 211 40.8
Glyma.03G202700 Glycine max HOM05D004363 ORTHO05D005110 1.5e-36 157.1 207 41.5
RcHm_v2.0_Chr3g0476301 Rosa chinensis HOM05D004363 ORTHO05D005110 1.5e-36 157.1 208 41.3
Sp6g27880 Schrenkiella parvula HOM05D004363 ORTHO05D005110 1.5e-36 157.1 211 43.1
A03p07650 Brassica napus HOM05D004363 ORTHO05D005110 1.9e-36 156.8 209 42.6
BraA03t10093Z Brassica rapa HOM05D004363 ORTHO05D005110 1.9e-36 156.8 209 42.6
Ca_09062_v3 Cicer arietinum L. HOM05D004363 ORTHO05D005110 1.9e-36 156.8 208 40.9
Thhalv10012466m.g Eutrema salsugineum HOM05D004363 ORTHO05D005110 2.5e-36 156.4 208 42.8
FAN05G1872 Fragaria x ananassa HOM05D004363 ORTHO05D005110 2.5e-36 156.4 217 41.5
Nitab4.5_0001177g0040 Nicotiana tabacum HOM05D004363 ORTHO05D005110 2.5e-36 156.4 212 40.6
Sopen01g002950 Solanum pennellii HOM05D004363 ORTHO05D005110 2.5e-36 156.4 209 42.1
FAN09G2042 Fragaria x ananassa HOM05D004363 ORTHO05D005110 3.3e-36 156.0 215 41.4
Actinidia03984 Actinidia chinensis HOM05D004363 ORTHO05D005110 4.3e-36 155.6 224 38.4
CSS0038425 Camellia sinensis var. sinensis HOM05D004363 ORTHO05D005110 5.7e-36 155.2 206 41.7
FAN02G1528 Fragaria x ananassa HOM05D004363 ORTHO05D005110 5.7e-36 155.2 208 41.3
PGR004G0690 Punica granatum HOM05D004363 ORTHO05D005110 5.7e-36 155.2 210 42.4
Solyc01g006960.3 Solanum lycopersicum HOM05D004363 ORTHO05D005110 5.7e-36 155.2 209 41.1
QL07p036386 Quercus lobata HOM05D004363 ORTHO05D005110 7.4e-36 154.8 210 39.5
SMO196G0050 Selaginella moellendorffii HOM05D004363 ORTHO05D005110 7.4e-36 154.8 210 43.8
ClCG10G018260 Citrullus lanatus HOM05D004363 ORTHO05D005110 1.3e-35 154.1 207 42.0
Cc06_g06670 Coffea canephora HOM05D004363 ORTHO05D005110 1.3e-35 154.1 209 41.1
PSO339G1158 Papaver somniferum HOM05D004363 ORTHO05D005110 1.6e-35 153.7 208 41.8
CAN.G911.40 Capsicum annuum HOM05D004363 ORTHO05D005110 2.2e-35 153.3 212 41.5
HanXRQChr02g0053261 Helianthus annuus HOM05D004363 ORTHO05D005110 2.2e-35 153.3 205 42.4
Actinidia03876 Actinidia chinensis HOM05D004363 ORTHO05D005110 2.8e-35 152.9 218 39.9
C03p08890 Brassica napus HOM05D004363 ORTHO05D005110 3.7e-35 152.5 209 41.6
BolC3t13384H Brassica oleracea HOM05D004363 ORTHO05D005110 3.7e-35 152.5 209 41.6
AT5G16280 Arabidopsis thaliana HOM05D004363 ORTHO05D005110 4.8e-35 152.1 211 42.2
Peaxi162Scf00582g00064 Petunia axillaris HOM05D004363 ORTHO05D005110 6.3e-35 151.8 212 40.1
MSTRG.5891 Avicennia marina HOM05D004363 ORTHO05D005110 8.2e-35 151.4 210 39.5
HPP92_013952 Vanilla planifolia HOM05D004363 ORTHO05D005110 8.2e-35 151.4 210 42.4
AUR62041186 Chenopodium quinoa HOM05D004363 ORTHO05D005110 1.1e-34 151.0 207 38.6
Oeu035643.1 Olea europaea HOM05D004363 ORTHO05D005110 1.1e-34 151.0 207 39.1
Sed0002127 Sechium edule HOM05D004363 ORTHO05D005110 1.4e-34 150.6 207 41.1
AUR62030686 Chenopodium quinoa HOM05D004363 ORTHO05D005110 1.8e-34 150.2 207 39.1
Lalb_Chr01g0017831 Lupinus albus HOM05D004363 ORTHO05D005110 3.1e-34 149.4 207 39.6
Manes.08G034300 Manihot esculenta HOM05D004363 ORTHO05D005110 3.1e-34 149.4 207 42.0
ECA233G0072 Erigeron canadensis HOM05D004363 ORTHO05D005110 4.1e-34 149.1 206 41.3
BcaNung06113 Brassica carinata HOM05D004363 ORTHO05D005110 2.6e-33 146.4 212 40.6
CsaV3_3G038050 Cucumis sativus L. HOM05D004363 ORTHO05D005110 2.6e-33 146.4 207 39.6
Nn3g20229 Nelumbo nucifera HOM05D004363 ORTHO05D005110 2.6e-33 146.4 143 48.3
Lsat_1_v5_gn_6_33820 Lactuca sativa HOM05D004363 ORTHO05D005110 7.7e-33 144.8 206 41.3
A10p22780 Brassica napus HOM05D004363 ORTHO05D005110 2.9e-32 142.9 211 40.8
BraA10t44344Z Brassica rapa HOM05D004363 ORTHO05D005110 2.9e-32 142.9 211 40.8
CBR_g74641 Chara braunii HOM05D004363 ORTHO05D005110 2.9e-32 142.9 230 36.1
Rhsim11G0045000 Rhododendron simsii HOM05D004363 ORTHO05D005110 3.8e-32 142.5 218 39.0
Sc01g0005470 Simmondsia chinensis HOM05D004363 ORTHO05D005110 3.8e-32 142.5 207 40.6
BolC9t58910H Brassica oleracea HOM05D004363 ORTHO05D005110 8.5e-32 141.4 211 40.3
CDE11G0453 Ceratophyllum demersum HOM05D004363 ORTHO05D005110 1.1e-31 141.0 210 38.1
Os03g0786900 Oryza sativa ssp. japonica HOM05D004363 ORTHO05D005110 1.4e-31 140.6 209 36.4
MSTRG.19302 Avicennia marina HOM05D004363 ORTHO05D005110 1.9e-31 140.2 210 38.1
Zm00001eb060010 Zea mays HOM05D004363 ORTHO05D005110 1.9e-31 140.2 210 36.2
SGA_v2.0_scaffold13G06653 Striga asiatica HOM05D004363 ORTHO05D005110 3.2e-31 139.4 207 39.6
Ah.07g203620 Amaranthus hybridus HOM05D004363 ORTHO05D005110 1.2e-30 137.5 207 38.2
MELO3C009547.2 Cucumis melo HOM05D004363 ORTHO05D005110 3.1e-26 122.9 253 33.2
Lalb_Chr25g0287961 Lupinus albus HOM05D004363 ORTHO05D005110 1.4e-21 107.5 165 38.8
Cpa.g.sc104.13 Carica papaya HOM05D004363 ORTHO05D005110 1.8e-13 80.5 104 40.4
Cre01.g024400 Chlamydomonas reinhardtii HOM05D004363 ORTHO05D005110 4.0e-13 79.3 213 27.7
unitig_578.g15812 Utricularia gibba HOM05D004363 ORTHO05D005110 1.6e-09 67.4 208 26.0
SHI08961 Sapria himalayana HOM05D004363 ORTHO05D005110 3.2e-07 59.7 132 31.8


User provided reference genes

Program Settings