Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_21189 Sequoiadendron giganteum HOM05D001486 ORTHO05D037216 4.6e-97 357.8 175 100.0
ATR0753G157 Amborella trichopoda HOM05D001486 ORTHO05D004921 5.4e-13 78.6 53 73.6
SEGI_10674 Sequoiadendron giganteum HOM05D003934 ORTHO05D005108 1.2e-12 77.4 59 66.1
HPP92_002282 Vanilla planifolia HOM05D001486 ORTHO05D004921 1.5e-10 70.5 53 64.2
CDE07G0203 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 9.6e-10 67.8 55 63.6
CDE06G1861 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 1.6e-09 67.0 53 66.0
Os06g0305200 Oryza sativa ssp. japonica HOM05D001486 ORTHO05D004921 2.1e-09 66.6 54 64.8
Zm00001eb399840 Zea mays HOM05D001486 ORTHO05D004921 2.1e-09 66.6 54 64.8
Zm00001eb334690 Zea mays HOM05D001486 ORTHO05D037216 2.4e-08 63.2 54 63.0
PSO063G3102 Papaver somniferum HOM05D001486 ORTHO05D004921 4.0e-08 62.4 53 60.4
PSO782G0822 Papaver somniferum HOM05D001486 ORTHO05D004921 4.0e-08 62.4 53 60.4
SEGI_29241 Sequoiadendron giganteum HOM05D004140 ORTHO05D006116 6.8e-08 61.6 59 57.6
Aqoxy7G03241 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 8.9e-08 61.2 53 62.3
Hund13366 Selenicereus undatus HOM05D001486 ORTHO05D004921 1.2e-07 60.8 53 62.3
Aqoxy3G03310 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 2.0e-07 60.1 53 60.4
Ca_17277_v3 Cicer arietinum L. HOM05D001486 ORTHO05D004921 2.0e-07 60.1 53 60.4
Glyma.08G045900 Glycine max HOM05D001486 ORTHO05D004921 2.0e-07 60.1 53 60.4
Phvul.002G321200 Phaseolus vulgaris HOM05D001486 ORTHO05D004921 2.0e-07 60.1 53 60.4
Prupe.1G333300 Prunus persica HOM05D001486 ORTHO05D004921 2.0e-07 60.1 53 60.4
VMungo0251G0466 Vigna mungo HOM05D001486 ORTHO05D004921 2.0e-07 60.1 53 60.4
arahy.Tifrunner.gnm1.ann1.WZE3XK Arachis hypogaea HOM05D001486 ORTHO05D004921 2.6e-07 59.7 53 60.4
Cc04_g10510 Coffea canephora HOM05D001486 ORTHO05D004921 2.6e-07 59.7 53 54.7
Glyma.05G238800 Glycine max HOM05D001486 ORTHO05D004921 2.6e-07 59.7 53 58.5
Psat7g007960 Pisum sativum HOM05D001486 ORTHO05D004921 2.6e-07 59.7 53 60.4
Atru.chr11.925 Acer truncatum HOM05D001486 ORTHO05D004921 3.4e-07 59.3 53 58.5
AagrBONN_evm.TU.Sc2ySwM_362.1455 Anthoceros agrestis HOM05D001486 ORTHO05D004921 3.4e-07 59.3 54 53.7
GSVIVG01011661001 Vitis vinifera HOM05D001486 ORTHO05D004921 3.4e-07 59.3 53 56.6
TPR.G19252 Trifolium pratense HOM05D001486 ORTHO05D004921 5.8e-07 58.5 53 58.5
Medtr8g105290 Medicago truncatula HOM05D001486 ORTHO05D004921 7.6e-07 58.2 53 58.5
arahy.Tifrunner.gnm1.ann1.FK3VI9 Arachis hypogaea HOM05D001486 ORTHO05D004921 9.9e-07 57.8 53 58.5
DCAR_007329 Daucus carota HOM05D001486 ORTHO05D004921 9.9e-07 57.8 53 60.4
Lj4g0010019 Lotus japonicus HOM05D001486 ORTHO05D004921 9.9e-07 57.8 53 58.5
CSS0037038 Camellia sinensis var. sinensis HOM05D001486 ORTHO05D004921 1.3e-06 57.4 53 54.7
Haze_10881 Corylus avellana HOM05D001486 ORTHO05D004921 1.3e-06 57.4 54 59.3
Migut.E00481 Erythranthe guttata HOM05D001486 ORTHO05D004921 1.3e-06 57.4 53 58.5
Lalb_Chr09g0330891 Lupinus albus HOM05D001486 ORTHO05D004921 1.3e-06 57.4 53 56.6
Mapoly0035s0137 Marchantia polymorpha HOM05D001486 ORTHO05D004921 1.3e-06 57.4 54 53.7
Thecc.02G292500 Theobroma cacao HOM05D001486 ORTHO05D004921 1.3e-06 57.4 53 56.6
Duzib251G0538 Durio zibethinus HOM05D001486 ORTHO05D004921 1.7e-06 57.0 53 56.6
Lj3A864G85 Lonicera japonica HOM05D001486 ORTHO05D004921 1.7e-06 57.0 53 56.6
MD13G1020400 Malus domestica HOM05D001486 ORTHO05D004921 1.7e-06 57.0 53 58.5
MD16G1018500 Malus domestica HOM05D001486 ORTHO05D004921 1.7e-06 57.0 53 56.6
PGR142G2431 Punica granatum HOM05D001486 ORTHO05D004921 1.7e-06 57.0 53 56.6
Duzib268G0355 Durio zibethinus HOM05D001486 ORTHO05D004921 2.2e-06 56.6 53 56.6
Potri.008G134800 Populus trichocarpa HOM05D001486 ORTHO05D004921 2.2e-06 56.6 53 56.6
Sabra08G0102800 Salix brachista HOM05D001486 ORTHO05D004921 2.2e-06 56.6 53 56.6
SalBow2G2685 Salvia bowleyana HOM05D001486 ORTHO05D004921 3.8e-06 55.8 55 56.4
CANSAT01G0610 Cannabis sativa HOM05D001486 ORTHO05D004921 6.4e-06 55.1 53 60.4
Gohir.D02G139700 Gossypium hirsutum HOM05D001486 ORTHO05D004921 6.4e-06 55.1 53 54.7
Lsat_1_v5_gn_8_46521 Lactuca sativa HOM05D001486 ORTHO05D004921 6.4e-06 55.1 53 52.8
Manes.17G083900 Manihot esculenta HOM05D001486 ORTHO05D004921 6.4e-06 55.1 53 54.7
Aa31LG1G260 Aethionema arabicum HOM05D001486 ORTHO05D004921 8.4e-06 54.7 53 52.8
MSTRG.2128 Avicennia marina HOM05D001486 ORTHO05D004921 8.4e-06 54.7 53 54.7
COL.COLO4_16588 Corchorus olitorius HOM05D001486 ORTHO05D004921 8.4e-06 54.7 53 52.8
Dinv07730 Davidia involucrata HOM05D001486 ORTHO05D004921 8.4e-06 54.7 53 52.8
SGA_v2.0_scaffold23G10214 Striga asiatica HOM05D001486 ORTHO05D004921 8.4e-06 54.7 53 54.7


User provided reference genes

Program Settings