Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_21167 Sequoiadendron giganteum HOM05D000042 ORTHO05D001427 5.6e-63 244.2 132 100.0
Lj1g0011813 Lotus japonicus HOM05D000042 ORTHO05D000028 5.7e-07 58.2 91 38.5
Os02g0761000 Oryza sativa ssp. japonica HOM05D000042 ORTHO05D001427 5.7e-07 58.2 105 33.3
Cpa.g.sc21.11 Carica papaya HOM05D000042 ORTHO05D001427 1.3e-06 57.0 81 40.7
Sp7g22540 Schrenkiella parvula HOM05D000042 ORTHO05D001427 1.3e-06 57.0 86 41.9
CsaV3_2G030300 Cucumis sativus L. HOM05D000042 ORTHO05D001427 1.7e-06 56.6 93 37.6
Gohir.A07G067100 Gossypium hirsutum HOM05D000042 ORTHO05D000028 1.7e-06 56.6 85 40.0
Os06g0217300 Oryza sativa ssp. japonica HOM05D000042 ORTHO05D001427 1.7e-06 56.6 130 29.2
Duzib068G1188 Durio zibethinus HOM05D000042 ORTHO05D000028 2.2e-06 56.2 85 40.0
Zm00001eb214750 Zea mays HOM05D000042 ORTHO05D000028 2.2e-06 56.2 103 36.9
AT4G24540 Arabidopsis thaliana HOM05D000042 ORTHO05D001427 2.8e-06 55.8 76 40.8
C07p53640 Brassica napus HOM05D000042 ORTHO05D017220 2.8e-06 55.8 86 38.4
SEGI_40177 Sequoiadendron giganteum HOM05D000042 ORTHO05D001427 2.8e-06 55.8 77 41.6
Thhalv10026757m.g Eutrema salsugineum HOM05D000042 ORTHO05D001427 3.7e-06 55.5 75 44.0
PGR042G3870 Punica granatum HOM05D000042 ORTHO05D001427 3.7e-06 55.5 88 39.8
AL7G28670 Arabidopsis lyrata HOM05D000042 ORTHO05D001427 4.8e-06 55.1 76 40.8
BcaC09g50857 Brassica carinata HOM05D000042 ORTHO05D001427 4.8e-06 55.1 86 39.5
TWI53G0436 Tripterygium wilfordii HOM05D000042 ORTHO05D001427 4.8e-06 55.1 81 38.3
Aa31LG4G9640 Aethionema arabicum HOM05D000042 ORTHO05D001427 6.3e-06 54.7 98 35.7
BcaC06g32877 Brassica carinata HOM05D000042 ORTHO05D001427 6.3e-06 54.7 86 39.5
CSS0037110 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D001427 6.3e-06 54.7 104 32.7
Carub.0007s1653 Capsella rubella HOM05D000042 ORTHO05D001427 6.3e-06 54.7 76 40.8
Duzib205G1737 Durio zibethinus HOM05D000042 ORTHO05D000028 6.3e-06 54.7 85 37.6
Os07g0108900 Oryza sativa ssp. japonica HOM05D000042 ORTHO05D000028 6.3e-06 54.7 101 35.6
Thecc.03G091600 Theobroma cacao HOM05D000042 ORTHO05D000028 6.3e-06 54.7 85 37.6
Thecc.03G106700 Theobroma cacao HOM05D000042 ORTHO05D000028 6.3e-06 54.7 85 37.6
Atru.chr13.1018 Acer truncatum HOM05D000042 ORTHO05D001427 8.2e-06 54.3 93 35.5
A03p55360 Brassica napus HOM05D000042 ORTHO05D001427 8.2e-06 54.3 86 38.4
C01p19850 Brassica napus HOM05D000076 ORTHO05D003143 8.2e-06 54.3 86 38.4
BolC1t01913H Brassica oleracea HOM05D000042 ORTHO05D001427 8.2e-06 54.3 86 38.4
BolC7t45857H Brassica oleracea HOM05D000042 ORTHO05D001427 8.2e-06 54.3 86 38.4
BraA03t14595Z Brassica rapa HOM05D000042 ORTHO05D001427 8.2e-06 54.3 86 38.4
AUR62012889 Chenopodium quinoa HOM05D000042 ORTHO05D001427 8.2e-06 54.3 87 39.1
TPR.G1977 Trifolium pratense HOM05D000042 ORTHO05D000028 8.2e-06 54.3 79 41.8


User provided reference genes

Program Settings