Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_21135 Sequoiadendron giganteum HOM05D003133 ORTHO05D003642 6.4e-63 243.8 115 100.0
Dinv37643 Davidia involucrata HOM05D003133 ORTHO05D003642 3.4e-48 194.9 91 94.5
CANSAT21G0409 Cannabis sativa HOM05D003133 ORTHO05D003642 2.2e-47 192.2 89 95.5
arahy.Tifrunner.gnm1.ann1.W25JQA Arachis hypogaea HOM05D003133 ORTHO05D003642 2.9e-47 191.8 89 94.4
arahy.Tifrunner.gnm1.ann1.WBB0SP Arachis hypogaea HOM05D003133 ORTHO05D003642 2.9e-47 191.8 89 94.4
Ciclev10019696m.g Citrus clementina HOM05D003133 ORTHO05D003642 2.9e-47 191.8 89 95.5
Ca_17536_v3 Cicer arietinum L. HOM05D003133 ORTHO05D003642 3.8e-47 191.4 91 92.3
PGR031G1439 Punica granatum HOM05D003133 ORTHO05D003642 3.8e-47 191.4 89 93.3
QL12p033200 Quercus lobata HOM05D003133 ORTHO05D003642 3.8e-47 191.4 91 92.3
TPR.G12862 Trifolium pratense HOM05D003133 ORTHO05D003642 3.8e-47 191.4 91 92.3
Eucgr.D01848 Eucalyptus grandis HOM05D003133 ORTHO05D003642 4.9e-47 191.0 89 94.4
Hma1.2p1_0792F.1_g218580 Hydrangea macrophylla HOM05D003133 ORTHO05D003642 4.9e-47 191.0 103 82.5
MBI18_g34593_MAGBIO Magnolia biondii HOM05D003133 ORTHO05D003642 4.9e-47 191.0 89 94.4
MD14G1104000 Malus domestica HOM05D003133 ORTHO05D003642 4.9e-47 191.0 91 92.3
Potri.001G104500 Populus trichocarpa HOM05D003133 ORTHO05D003642 4.9e-47 191.0 89 94.4
GSVIVG01019757001 Vitis vinifera HOM05D003133 ORTHO05D003642 4.9e-47 191.0 91 92.3
Aqoxy7G00341 Aquilegia oxysepala HOM05D003133 ORTHO05D003642 6.4e-47 190.7 91 92.3
CiPaw.11G135600 Carya illinoinensis HOM05D003133 ORTHO05D003642 6.4e-47 190.7 91 91.2
CiPaw.12G093500 Carya illinoinensis HOM05D003133 ORTHO05D003642 8.4e-47 190.3 91 92.3
TAR629G0119 Trochodendron aralioides HOM05D003133 ORTHO05D003642 8.4e-47 190.3 89 94.4
HanXRQChr17g0533681 Helianthus annuus HOM05D003133 ORTHO05D003642 1.1e-46 189.9 91 91.2
Medtr8g098350 Medicago truncatula HOM05D003133 ORTHO05D003642 1.1e-46 189.9 91 91.2
Sabra03G0090000 Salix brachista HOM05D003133 ORTHO05D003642 1.1e-46 189.9 89 93.3
TWI15G0789 Tripterygium wilfordii HOM05D003133 ORTHO05D003642 1.1e-46 189.9 91 90.1
Lalb_Chr05g0224791 Lupinus albus HOM05D003133 ORTHO05D003642 1.4e-46 189.5 89 92.1
PSO017G2538 Papaver somniferum HOM05D003133 ORTHO05D003642 1.9e-46 189.1 91 91.2
PSO063G0727 Papaver somniferum HOM05D003133 ORTHO05D003642 1.9e-46 189.1 91 91.2
CSS0043939 Camellia sinensis var. sinensis HOM05D003133 ORTHO05D003642 2.4e-46 188.7 91 91.2
CSS0049388 Camellia sinensis var. sinensis HOM05D003133 ORTHO05D003642 2.4e-46 188.7 91 91.2
Manes.02G022200 Manihot esculenta HOM05D003133 ORTHO05D003642 2.4e-46 188.7 89 92.1
Oeu011047.1 Olea europaea HOM05D003133 ORTHO05D003642 2.4e-46 188.7 92 90.2
Potri.003G126900 Populus trichocarpa HOM05D003133 ORTHO05D003642 3.2e-46 188.3 89 92.1
Prupe.5G099700 Prunus persica HOM05D003133 ORTHO05D003642 3.2e-46 188.3 91 91.2
Thecc.03G278200 Theobroma cacao HOM05D003133 ORTHO05D003642 3.2e-46 188.3 89 92.1
ClCG01G002740 Citrullus lanatus HOM05D003133 ORTHO05D003642 4.2e-46 188.0 90 88.9
Lj2A192G38 Lonicera japonica HOM05D003133 ORTHO05D003642 4.2e-46 188.0 91 90.1
MD06G1082500 Malus domestica HOM05D003133 ORTHO05D003642 4.2e-46 188.0 91 90.1
Psat7g033480 Pisum sativum HOM05D003133 ORTHO05D003642 4.2e-46 188.0 89 91.0
COL.COLO4_34458 Corchorus olitorius HOM05D003133 ORTHO05D003642 5.4e-46 187.6 89 91.0
Lj4g0013021 Lotus japonicus HOM05D003133 ORTHO05D003642 5.4e-46 187.6 89 92.1
Peaxi162Scf00119g00083 Petunia axillaris HOM05D003133 ORTHO05D003642 5.4e-46 187.6 91 90.1
Rhsim02G0230000 Rhododendron simsii HOM05D003133 ORTHO05D003642 5.4e-46 187.6 91 90.1
ATR0810G035 Amborella trichopoda HOM05D003133 ORTHO05D003642 7.1e-46 187.2 89 92.1
MSTRG.13837 Avicennia marina HOM05D003133 ORTHO05D003642 7.1e-46 187.2 91 89.0
MELO3C005674.2 Cucumis melo HOM05D003133 ORTHO05D003642 7.1e-46 187.2 89 91.0
CsaV3_5G002830 Cucumis sativus L. HOM05D003133 ORTHO05D003642 7.1e-46 187.2 89 91.0
Gohir.D09G186600 Gossypium hirsutum HOM05D003133 ORTHO05D003642 7.1e-46 187.2 89 91.0
Gorai.006G209400 Gossypium raimondii HOM05D003133 ORTHO05D003642 7.1e-46 187.2 89 91.0
PGSC0003DMG400012210 Solanum tuberosum HOM05D003133 ORTHO05D003642 7.1e-46 187.2 91 89.0
TAR636G2389 Trochodendron aralioides HOM05D003133 ORTHO05D003642 7.1e-46 187.2 89 93.3
Duzib084G0978 Durio zibethinus HOM05D003133 ORTHO05D003642 9.3e-46 186.8 89 91.0
SalBow7G4504 Salvia bowleyana HOM05D003133 ORTHO05D003642 9.3e-46 186.8 89 92.1
Hund11475 Selenicereus undatus HOM05D003133 ORTHO05D003642 9.3e-46 186.8 89 92.1
THA.LOC104814473 Tarenaya hassleriana HOM05D003133 ORTHO05D003642 9.3e-46 186.8 89 92.1
Cfa012177 Carpinus fangiana HOM05D003133 ORTHO05D003642 1.2e-45 186.4 89 91.0
Haze_08845 Corylus avellana HOM05D003133 ORTHO05D003642 1.2e-45 186.4 89 91.0
Lalb_Chr09g0333371 Lupinus albus HOM05D003133 ORTHO05D003642 1.2e-45 186.4 89 89.9
Nitab4.5_0010612g0020 Nicotiana tabacum HOM05D003133 ORTHO05D003642 1.2e-45 186.4 91 89.0
SalBow8G3631 Salvia bowleyana HOM05D003133 ORTHO05D003642 1.2e-45 186.4 91 89.0
SGA_v2.0_scaffold173G39193 Striga asiatica HOM05D003133 ORTHO05D003642 1.2e-45 186.4 89 91.0
Hma1.2p1_2966F.1_g330980 Hydrangea macrophylla HOM05D003133 ORTHO05D003642 1.6e-45 186.0 91 89.0
RcHm_v2.0_Chr7g0197771 Rosa chinensis HOM05D003133 ORTHO05D003642 1.6e-45 186.0 91 90.1
Solyc08g081010.3 Solanum lycopersicum HOM05D003133 ORTHO05D003642 1.6e-45 186.0 91 87.9
Sopen08g029330 Solanum pennellii HOM05D003133 ORTHO05D003642 1.6e-45 186.0 91 87.9
Gohir.A09G192401 Gossypium hirsutum HOM05D003133 ORTHO05D003642 2.1e-45 185.7 89 89.9
HanXRQChr06g0165551 Helianthus annuus HOM05D003133 ORTHO05D003642 2.1e-45 185.7 91 90.1
Nn6g33441 Nelumbo nucifera HOM05D003133 ORTHO05D003642 2.1e-45 185.7 89 89.9
Nn6g33461 Nelumbo nucifera HOM05D003133 ORTHO05D003642 2.1e-45 185.7 89 89.9
Os07g0462000 Oryza sativa ssp. japonica HOM05D003133 ORTHO05D003642 2.1e-45 185.7 89 91.0
Hund14791 Selenicereus undatus HOM05D003133 ORTHO05D003642 2.1e-45 185.7 89 91.0
THA.LOC104806388 Tarenaya hassleriana HOM05D003133 ORTHO05D003642 2.1e-45 185.7 91 89.0
CAN.G774.27 Capsicum annuum HOM05D003133 ORTHO05D003642 2.7e-45 185.3 91 87.9
Lj8A228T23 Lonicera japonica HOM05D003133 ORTHO05D003642 2.7e-45 185.3 89 91.0
Lj8A232T62 Lonicera japonica HOM05D003133 ORTHO05D003642 2.7e-45 185.3 89 91.0
Sabra01G0079200 Salix brachista HOM05D003133 ORTHO05D003642 2.7e-45 185.3 89 91.0
AUR62003405 Chenopodium quinoa HOM05D003133 ORTHO05D003642 3.5e-45 184.9 91 89.0
AUR62017210 Chenopodium quinoa HOM05D003133 ORTHO05D003642 3.5e-45 184.9 91 89.0
Nn1g01499 Nelumbo nucifera HOM05D003133 ORTHO05D003642 3.5e-45 184.9 89 92.1
HPP92_015162 Vanilla planifolia HOM05D003133 ORTHO05D003642 3.5e-45 184.9 89 91.0
Oeu009160.2 Olea europaea HOM05D003133 ORTHO05D003642 4.6e-45 184.5 89 89.9
Phvul.002G289200 Phaseolus vulgaris HOM05D003133 ORTHO05D003642 4.6e-45 184.5 89 89.9
Aa31LG6G5160 Aethionema arabicum HOM05D003133 ORTHO05D003642 6.0e-45 184.1 91 87.9
Zm00001eb264980 Zea mays HOM05D003133 ORTHO05D003642 6.0e-45 184.1 89 89.9
Os05g0129000 Oryza sativa ssp. japonica HOM05D003133 ORTHO05D003642 7.9e-45 183.7 89 88.8
TWI81G1077 Tripterygium wilfordii HOM05D003133 ORTHO05D003642 7.9e-45 183.7 89 91.0
Cc08_g14690 Coffea canephora HOM05D003133 ORTHO05D003642 1.0e-44 183.3 89 87.6
FAN04G0830 Fragaria x ananassa HOM05D003133 ORTHO05D003642 1.0e-44 183.3 91 87.9
FAN08G3005 Fragaria x ananassa HOM05D003133 ORTHO05D003642 1.0e-44 183.3 91 87.9
FAN13G1971 Fragaria x ananassa HOM05D003133 ORTHO05D003642 1.0e-44 183.3 91 87.9
Glyma.05G207600 Glycine max HOM05D003133 ORTHO05D003642 1.0e-44 183.3 89 88.8
Nitab4.5_0003441g0130 Nicotiana tabacum HOM05D003133 ORTHO05D003642 1.0e-44 183.3 91 87.9
Migut.A00769 Erythranthe guttata HOM05D003133 ORTHO05D003642 1.3e-44 183.0 91 87.9
FvH4_5g02350 Fragaria vesca HOM05D003133 ORTHO05D003642 1.3e-44 183.0 91 87.9
FAN18G2670 Fragaria x ananassa HOM05D003133 ORTHO05D003642 1.3e-44 183.0 91 87.9
BcaB03g11757 Brassica carinata HOM05D003133 ORTHO05D003642 1.7e-44 182.6 89 88.8
BcaNung03247 Brassica carinata HOM05D003133 ORTHO05D003642 1.7e-44 182.6 89 88.8
A03p54030 Brassica napus HOM05D003133 ORTHO05D003642 1.7e-44 182.6 89 88.8
C07p52450 Brassica napus HOM05D003133 ORTHO05D003642 1.7e-44 182.6 89 88.8
BraA03t14471Z Brassica rapa HOM05D003133 ORTHO05D003642 1.7e-44 182.6 89 88.8
CARHR230180 Cardamine hirsuta HOM05D003133 ORTHO05D003642 1.7e-44 182.6 89 88.8
Thhalv10024916m.g Eutrema salsugineum HOM05D003133 ORTHO05D003642 1.7e-44 182.6 89 88.8
Sed0025899 Sechium edule HOM05D003133 ORTHO05D003642 1.7e-44 182.6 89 87.6
Sc22g0005610 Simmondsia chinensis HOM05D003133 ORTHO05D003642 1.7e-44 182.6 89 89.9
BcaNung01474 Brassica carinata HOM05D003133 ORTHO05D003642 2.3e-44 182.2 89 88.8
BolC7t45742H Brassica oleracea HOM05D003133 ORTHO05D003642 2.3e-44 182.2 89 88.8
Lsat_1_v5_gn_1_34361 Lactuca sativa HOM05D003133 ORTHO05D003642 2.3e-44 182.2 91 87.9
Sp7g21160 Schrenkiella parvula HOM05D003133 ORTHO05D003642 2.3e-44 182.2 89 88.8
VMungo0251G3225 Vigna mungo HOM05D003133 ORTHO05D003642 2.3e-44 182.2 89 88.8
ECA246G1277 Erigeron canadensis HOM05D003133 ORTHO05D003642 3.0e-44 181.8 91 86.8
Glyma.08G014300 Glycine max HOM05D003133 ORTHO05D003642 3.0e-44 181.8 89 87.6
AL7G30380 Arabidopsis lyrata HOM05D003133 ORTHO05D003642 3.9e-44 181.4 89 88.8
AT4G23100 Arabidopsis thaliana HOM05D003133 ORTHO05D003642 3.9e-44 181.4 89 88.8
Ah.12g056970 Amaranthus hybridus HOM05D003133 ORTHO05D003642 5.1e-44 181.0 89 87.6
Mapoly0043s0124 Marchantia polymorpha HOM05D003133 ORTHO05D003642 8.7e-44 180.3 89 86.5
Zm00001eb354890 Zea mays HOM05D003133 ORTHO05D003642 8.7e-44 180.3 89 88.8
BcaC09g51026 Brassica carinata HOM05D003133 ORTHO05D003642 1.1e-43 179.9 89 86.5
A01p14400 Brassica napus HOM05D003133 ORTHO05D003642 1.1e-43 179.9 89 86.5
C01p17720 Brassica napus HOM05D003133 ORTHO05D003642 1.1e-43 179.9 89 86.5
BolC1t01707H Brassica oleracea HOM05D003133 ORTHO05D003642 1.1e-43 179.9 89 86.5
BraA01t01385Z Brassica rapa HOM05D003133 ORTHO05D003642 1.1e-43 179.9 89 86.5
Carub.0007s1815 Capsella rubella HOM05D003133 ORTHO05D003642 1.5e-43 179.5 89 86.5
CDE09G0774 Ceratophyllum demersum HOM05D003133 ORTHO05D003642 1.5e-43 179.5 89 86.5
CDE11G0240 Ceratophyllum demersum HOM05D003133 ORTHO05D003642 1.5e-43 179.5 89 86.5
BcaNung00995 Brassica carinata HOM05D003133 ORTHO05D003642 1.9e-43 179.1 89 86.5
AagrBONN_evm.TU.Sc2ySwM_228.1870 Anthoceros agrestis HOM05D003133 ORTHO05D003642 2.5e-43 178.7 89 86.5
EL10Ac5g13059 Beta vulgaris HOM05D003133 ORTHO05D003642 2.5e-43 178.7 89 86.5
vmacro11331 Vaccinium macrocarpon HOM05D003133 ORTHO05D003642 2.5e-43 178.7 91 87.9
SMO353G0160 Selaginella moellendorffii HOM05D003133 ORTHO05D003642 3.3e-43 178.3 91 83.5
SHI07126 Sapria himalayana HOM05D003133 ORTHO05D003642 8.1e-42 173.7 122 70.5
Pp3c2_1270 Physcomitrium patens HOM05D003133 ORTHO05D003642 1.1e-41 173.3 88 85.2
Pp3c1_34800 Physcomitrium patens HOM05D003133 ORTHO05D003642 3.1e-41 171.8 88 84.1
DCAR_004635 Daucus carota HOM05D003133 ORTHO05D003642 5.3e-41 171.0 91 81.3
LjContig00312_ERROPOS870357g0003358 Lotus japonicus HOM05D003133 ORTHO05D003642 2.0e-40 169.1 89 80.9
Lalb_Chr09g0320991 Lupinus albus HOM05D003133 ORTHO05D003642 3.4e-40 168.3 89 80.9
Glyma.01G219900 Glycine max HOM05D003133 ORTHO05D003642 9.9e-40 166.8 89 82.0
Cpa.g.sc74.44 Carica papaya HOM05D003133 ORTHO05D003642 8.4e-39 163.7 79 88.6
QL07p017350 Quercus lobata HOM05D003133 ORTHO05D003642 8.4e-39 163.7 89 82.0
SMO143G0252 Selaginella moellendorffii HOM05D003133 ORTHO05D003642 8.4e-39 163.7 89 77.5
CSS0000321 Camellia sinensis var. sinensis HOM05D003133 ORTHO05D003642 1.1e-38 163.3 100 74.0
Cfa012180 Carpinus fangiana HOM05D003133 ORTHO05D003642 1.1e-38 163.3 89 80.9
Prupe.5G099600 Prunus persica HOM05D003133 ORTHO05D003642 1.9e-38 162.5 89 77.5
Cre02.g077100 Chlamydomonas reinhardtii HOM05D003133 ORTHO05D003642 2.4e-38 162.2 89 78.7
TPR.G6641 Trifolium pratense HOM05D003133 ORTHO05D003642 2.4e-38 162.2 89 78.7
Medtr5g010250 Medicago truncatula HOM05D003133 ORTHO05D003642 3.2e-38 161.8 89 77.5
VMungo1215G2488 Vigna mungo HOM05D003133 ORTHO05D003642 3.2e-38 161.8 89 78.7
Phvul.002G157600 Phaseolus vulgaris HOM05D003133 ORTHO05D003642 9.3e-38 160.2 89 77.5
Cfa012179 Carpinus fangiana HOM05D003133 ORTHO05D003642 2.7e-37 158.7 89 75.3
PRCOL_00004592 Prasinoderma coloniale HOM05D003133 ORTHO05D003642 3.9e-36 154.8 88 72.7
CBR_g17908 Chara braunii HOM05D003133 ORTHO05D003642 5.1e-36 154.5 89 74.2
Duzib068G0542 Durio zibethinus HOM05D003133 ORTHO05D003642 2.8e-34 148.7 82 80.5
MCO14G076 Micromonas commoda HOM05D003133 ORTHO05D003642 1.4e-33 146.4 89 69.7
BcaNung03246 Brassica carinata HOM05D003133 ORTHO05D003642 2.0e-32 142.5 89 68.5
AL7G30390 Arabidopsis lyrata HOM05D003133 ORTHO05D003642 3.4e-32 141.7 89 68.5
A03p54020 Brassica napus HOM05D003133 ORTHO05D003642 4.5e-32 141.4 89 69.7
BraA03t14470Z Brassica rapa HOM05D003133 ORTHO05D003642 4.5e-32 141.4 89 69.7
C07p52420 Brassica napus HOM05D003133 ORTHO05D003642 1.0e-31 140.2 89 68.5
BolC7t45737H Brassica oleracea HOM05D003133 ORTHO05D003642 1.0e-31 140.2 89 68.5
Carub.0007s2982 Capsella rubella HOM05D003133 ORTHO05D003642 2.2e-31 139.0 89 65.2
AL5G13020 Arabidopsis lyrata HOM05D003133 ORTHO05D003642 3.8e-31 138.3 89 65.2
BcaNung01476 Brassica carinata HOM05D003133 ORTHO05D003642 8.4e-31 137.1 89 67.4
Actinidia14558 Actinidia chinensis HOM05D003133 ORTHO05D003642 5.5e-30 134.4 91 71.4
MD07G1036400 Malus domestica HOM05D003133 ORTHO05D003642 7.1e-30 134.0 94 61.7
Glyma.11G023566 Glycine max HOM05D003133 ORTHO05D003642 1.8e-28 129.4 70 77.1
C03p84590 Brassica napus HOM05D003133 ORTHO05D003642 2.3e-28 129.0 89 70.8
BolC3t20748H Brassica oleracea HOM05D003133 ORTHO05D003642 2.3e-28 129.0 89 70.8
unitig_88.g27613 Utricularia gibba HOM05D003133 ORTHO05D003642 3.9e-28 128.3 91 67.0
DCAR_004633 Daucus carota HOM05D003133 ORTHO05D003642 7.4e-27 124.0 62 87.1
arahy.Tifrunner.gnm1.ann1.Y73929 Arachis hypogaea HOM05D003133 ORTHO05D003642 2.1e-26 122.5 65 80.0
Manes.01G061500 Manihot esculenta HOM05D003133 ORTHO05D003642 4.8e-26 121.3 89 67.4
Haze_08840 Corylus avellana HOM05D003133 ORTHO05D003642 6.3e-26 120.9 64 79.7
Pp3c22_12540 Physcomitrium patens HOM05D003133 ORTHO05D003642 1.1e-25 120.2 89 61.8
Haze_08839 Corylus avellana HOM05D003133 ORTHO05D003642 6.9e-25 117.5 64 79.7
Rhsim02G0230100 Rhododendron simsii HOM05D003133 ORTHO05D003642 2.6e-24 115.5 58 82.8
ATR0680G192 Amborella trichopoda HOM05D003133 ORTHO05D003642 6.5e-23 110.9 61 73.8
Ca_24552_v3 Cicer arietinum L. HOM05D003133 ORTHO05D003642 1.4e-22 109.8 95 54.7
BcaC01g00811 Brassica carinata HOM05D003133 ORTHO05D003642 1.1e-17 93.6 77 58.4
Atru.chr9.2197 Acer truncatum HOM05D003133 ORTHO05D003642 1.4e-14 83.2 39 94.9
TPR.G421 Trifolium pratense HOM05D003133 ORTHO05D003642 7.2e-14 80.9 83 51.8
TPR.G30225 Trifolium pratense HOM05D003133 ORTHO05D003642 4.6e-13 78.2 82 51.2
AUR62010673 Chenopodium quinoa HOM05D003133 ORTHO05D003642 4.8e-10 68.2 31 93.5
MELO3C034386.2 Cucumis melo HOM05D059782 ORTHO05D170348 2.5e-06 55.8 46 58.7


User provided reference genes

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