Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11727 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 4.0e-84 314.7 156 100.0
SEGI_20628 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 4.0e-84 314.7 156 100.0
CSS0046709 Camellia sinensis var. sinensis HOM05D003919 ORTHO05D004906 1.2e-48 196.8 157 60.5
Manes.04G066100 Manihot esculenta HOM05D003919 ORTHO05D004906 2.3e-47 192.6 156 59.0
CiPaw.05G168700 Carya illinoinensis HOM05D003919 ORTHO05D004906 3.0e-47 192.2 157 60.5
Prupe.1G347000 Prunus persica HOM05D003919 ORTHO05D004906 6.7e-47 191.0 157 59.2
Nn4g24949 Nelumbo nucifera HOM05D003919 ORTHO05D004906 1.1e-46 190.3 158 61.4
RcHm_v2.0_Chr4g0446631 Rosa chinensis HOM05D003919 ORTHO05D004906 1.1e-46 190.3 157 58.6
Lj6A719G43 Lonicera japonica HOM05D003919 ORTHO05D004906 1.5e-46 189.9 157 58.6
Potri.005G093000 Populus trichocarpa HOM05D003919 ORTHO05D004906 1.9e-46 189.5 157 59.9
TAR374G1487 Trochodendron aralioides HOM05D003919 ORTHO05D004906 1.9e-46 189.5 157 58.6
ATR0618G139 Amborella trichopoda HOM05D003919 ORTHO05D004906 2.5e-46 189.1 156 59.6
PSO782G3793 Papaver somniferum HOM05D003919 ORTHO05D004906 2.5e-46 189.1 157 59.2
FAN07G2510 Fragaria x ananassa HOM05D003919 ORTHO05D004906 3.3e-46 188.7 157 57.3
Sabra05G0077100 Salix brachista HOM05D003919 ORTHO05D004906 4.3e-46 188.3 157 59.2
FAN12G0111 Fragaria x ananassa HOM05D003919 ORTHO05D004906 7.4e-46 187.6 157 56.7
Actinidia04322 Actinidia chinensis HOM05D003919 ORTHO05D004906 9.6e-46 187.2 157 58.6
FvH4_4g36870 Fragaria vesca HOM05D003919 ORTHO05D004906 1.3e-45 186.8 157 56.1
Sc06g0007940 Simmondsia chinensis HOM05D003919 ORTHO05D004906 1.3e-45 186.8 157 59.2
FAN17G2968 Fragaria x ananassa HOM05D003919 ORTHO05D004906 3.7e-45 185.3 157 56.7
Rhsim09G0081500 Rhododendron simsii HOM05D003919 ORTHO05D004906 4.8e-45 184.9 157 58.0
PGR044G0490 Punica granatum HOM05D003919 ORTHO05D004906 8.2e-45 184.1 157 56.7
Sed0027848 Sechium edule HOM05D003919 ORTHO05D004906 8.2e-45 184.1 157 57.3
MELO3C023597.2 Cucumis melo HOM05D003919 ORTHO05D004906 1.1e-44 183.7 158 58.2
Cfa008737 Carpinus fangiana HOM05D003919 ORTHO05D004906 1.4e-44 183.3 157 58.0
ClCG09G004560 Citrullus lanatus HOM05D003919 ORTHO05D004906 1.4e-44 183.3 157 58.0
Haze_11754 Corylus avellana HOM05D003919 ORTHO05D004906 1.4e-44 183.3 139 62.6
ECA233G1217 Erigeron canadensis HOM05D003919 ORTHO05D004906 1.8e-44 183.0 156 57.7
Atru.chr11.1166 Acer truncatum HOM05D003919 ORTHO05D004906 2.4e-44 182.6 157 58.0
QL03p046003 Quercus lobata HOM05D003919 ORTHO05D004906 3.1e-44 182.2 157 56.1
vmacro10895 Vaccinium macrocarpon HOM05D003919 ORTHO05D004906 3.1e-44 182.2 157 57.3
Ciclev10030469m.g Citrus clementina HOM05D003919 ORTHO05D004906 5.3e-44 181.4 157 57.3
TWI53G0046 Tripterygium wilfordii HOM05D003919 ORTHO05D004906 5.3e-44 181.4 156 57.1
AUR62015231 Chenopodium quinoa HOM05D003919 ORTHO05D004906 6.9e-44 181.0 157 54.8
COL.COLO4_13755 Corchorus olitorius HOM05D003919 ORTHO05D004906 6.9e-44 181.0 135 63.0
Glyma.09G282200 Glycine max HOM05D003919 ORTHO05D004906 6.9e-44 181.0 157 56.7
AUR62017695 Chenopodium quinoa HOM05D003919 ORTHO05D004906 9.0e-44 180.6 157 54.8
CsaV3_7G030590 Cucumis sativus L. HOM05D003919 ORTHO05D004906 9.0e-44 180.6 157 57.3
HanXRQChr12g0366421 Helianthus annuus HOM05D003919 ORTHO05D004906 9.0e-44 180.6 156 55.1
Duzib132G0455 Durio zibethinus HOM05D003919 ORTHO05D004906 1.2e-43 180.3 156 56.4
DCAR_026901 Daucus carota HOM05D003919 ORTHO05D004906 1.5e-43 179.9 158 55.7
Solyc02g014190.4 Solanum lycopersicum HOM05D003919 ORTHO05D004906 1.5e-43 179.9 157 56.1
Medtr1g037310 Medicago truncatula HOM05D003919 ORTHO05D004906 2.0e-43 179.5 157 55.4
CAN.G157.22 Capsicum annuum HOM05D003919 ORTHO05D004906 2.6e-43 179.1 157 56.1
Cc11_g02410 Coffea canephora HOM05D003919 ORTHO05D004906 2.6e-43 179.1 157 56.1
Hund24370 Selenicereus undatus HOM05D003919 ORTHO05D004906 2.6e-43 179.1 157 56.1
Carub.0006s2090 Capsella rubella HOM05D003919 ORTHO05D004906 3.4e-43 178.7 157 58.0
Sopen02g003520 Solanum pennellii HOM05D003919 ORTHO05D004906 3.4e-43 178.7 157 56.1
Lsat_1_v5_gn_8_31660 Lactuca sativa HOM05D003919 ORTHO05D004906 4.5e-43 178.3 156 56.4
MD16G1001800 Malus domestica HOM05D003919 ORTHO05D004906 5.8e-43 177.9 157 55.4
CDE08G0505 Ceratophyllum demersum HOM05D003919 ORTHO05D004906 7.6e-43 177.6 135 63.0
Peaxi162Scf00363g00329 Petunia axillaris HOM05D003919 ORTHO05D004906 7.6e-43 177.6 157 54.8
AL6G34300 Arabidopsis lyrata HOM05D003919 ORTHO05D004906 1.0e-42 177.2 157 57.3
EL10Ac9g22945 Beta vulgaris HOM05D003919 ORTHO05D004906 1.0e-42 177.2 157 54.1
Thhalv10003499m.g Eutrema salsugineum HOM05D003919 ORTHO05D004906 1.0e-42 177.2 157 58.0
C07p44420 Brassica napus HOM05D003919 ORTHO05D004906 1.3e-42 176.8 157 57.3
BolC7t44964H Brassica oleracea HOM05D003919 ORTHO05D004906 1.3e-42 176.8 157 57.3
TPR.G8246 Trifolium pratense HOM05D003919 ORTHO05D004906 1.3e-42 176.8 157 55.4
A03p46400 Brassica napus HOM05D003919 ORTHO05D004906 1.7e-42 176.4 157 57.3
BraA03t13766Z Brassica rapa HOM05D003919 ORTHO05D004906 1.7e-42 176.4 157 57.3
Zm00001eb066370 Zea mays HOM05D003919 ORTHO05D004906 2.2e-42 176.0 158 55.7
Aqoxy3G04259 Aquilegia oxysepala HOM05D003919 ORTHO05D004906 3.8e-42 175.3 135 62.2
arahy.Tifrunner.gnm1.ann1.FE7SUA Arachis hypogaea HOM05D003919 ORTHO05D004906 3.8e-42 175.3 157 55.4
CARHR190420 Cardamine hirsuta HOM05D003919 ORTHO05D004906 4.9e-42 174.9 157 57.3
Ca_25292_v3 Cicer arietinum L. HOM05D003919 ORTHO05D004906 4.9e-42 174.9 157 54.8
THA.LOC104819381 Tarenaya hassleriana HOM05D003919 ORTHO05D004906 4.9e-42 174.9 158 58.2
Aa31LG11G2600 Aethionema arabicum HOM05D003919 ORTHO05D004906 6.5e-42 174.5 157 57.3
AagrBONN_evm.TU.Sc2ySwM_344.4345 Anthoceros agrestis HOM05D003919 ORTHO05D004906 6.5e-42 174.5 156 53.2
Migut.J01108 Erythranthe guttata HOM05D003919 ORTHO05D004906 6.5e-42 174.5 156 54.5
Psat6g099280 Pisum sativum HOM05D003919 ORTHO05D004906 6.5e-42 174.5 157 54.8
AT5G23110 Arabidopsis thaliana HOM05D003919 ORTHO05D004906 8.4e-42 174.1 157 56.7
Glyma.20G003400 Glycine max HOM05D003919 ORTHO05D004906 8.4e-42 174.1 157 55.4
Thecc.02G160300 Theobroma cacao HOM05D003919 ORTHO05D004906 1.1e-41 173.7 156 55.8
Os04g0675101 Oryza sativa ssp. japonica HOM05D003919 ORTHO05D004906 1.4e-41 173.3 156 54.5
Gohir.A12G134051 Gossypium hirsutum HOM05D003919 ORTHO05D004906 2.5e-41 172.6 135 59.3
Pp3c9_15860 Physcomitrium patens HOM05D003919 ORTHO05D004906 2.5e-41 172.6 133 57.9
Mapoly0175s0011 Marchantia polymorpha HOM05D003919 ORTHO05D004906 3.2e-41 172.2 138 60.9
Gohir.D12G137500 Gossypium hirsutum HOM05D003919 ORTHO05D004906 4.2e-41 171.8 135 59.3
Gorai.008G149000 Gossypium raimondii HOM05D003919 ORTHO05D004906 4.2e-41 171.8 135 59.3
Lj2g0026278 Lotus japonicus HOM05D003919 ORTHO05D004906 5.5e-41 171.4 157 54.1
Ah.01g012280 Amaranthus hybridus HOM05D003919 ORTHO05D004906 7.1e-41 171.0 157 52.9
Eucgr.J00863 Eucalyptus grandis HOM05D003919 ORTHO05D004906 7.1e-41 171.0 156 57.1
SGA_v2.0_scaffold17G08205 Striga asiatica HOM05D003919 ORTHO05D004906 3.0e-39 165.6 156 51.9
HPP92_012909 Vanilla planifolia HOM05D003919 ORTHO05D004906 5.1e-39 164.9 145 56.6
GSVIVG01012044001 Vitis vinifera HOM05D003919 ORTHO05D004906 6.3e-37 157.9 122 60.7
Sp2g24010 Schrenkiella parvula HOM05D003919 ORTHO05D004906 5.9e-35 151.4 157 52.2
Oeu055859.1 Olea europaea HOM05D003919 ORTHO05D004906 8.5e-34 147.5 122 59.8
HPP92_012876 Vanilla planifolia HOM05D003919 ORTHO05D004906 3.2e-33 145.6 114 62.3
SMO164G0254 Selaginella moellendorffii HOM05D003919 ORTHO05D004906 9.4e-33 144.1 138 50.0
CAN.G157.23 Capsicum annuum HOM05D003919 ORTHO05D004906 1.1e-20 104.0 142 35.2
Nitab4.5_0003853g0020 Nicotiana tabacum HOM05D003919 ORTHO05D004906 9.1e-20 100.9 142 35.2
Nitab4.5_0000405g0040 Nicotiana tabacum HOM05D003919 ORTHO05D004906 5.9e-19 98.2 142 34.5
Lalb_Chr04g0258931 Lupinus albus HOM05D003919 ORTHO05D004906 1.3e-18 97.1 138 34.8
CiPaw.05G168800 Carya illinoinensis HOM05D003919 ORTHO05D004906 8.5e-18 94.4 137 34.3
Dinv11717 Davidia involucrata HOM05D003919 ORTHO05D004906 1.9e-17 93.2 139 32.4
Phvul.003G005926 Phaseolus vulgaris HOM05D003919 ORTHO05D004906 1.4e-15 87.0 138 31.9
Cre01.g044850 Chlamydomonas reinhardtii HOM05D003919 ORTHO05D004906 3.0e-15 85.9 167 31.7
CDE08G0032 Ceratophyllum demersum HOM05D003919 ORTHO05D004906 1.1e-14 84.0 141 31.9
Cpa.g.sc0.155 Carica papaya HOM05D003919 ORTHO05D004906 5.3e-12 75.1 87 44.8
SEGI_33076 Sequoiadendron giganteum HOM05D003919 ORTHO05D004188 9.1e-12 74.3 40 85.0
MCO02G364 Micromonas commoda HOM05D003919 ORTHO05D004906 5.9e-11 71.6 147 30.6


User provided reference genes

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