Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20513 Sequoiadendron giganteum HOM05D005908 ORTHO05D007235 3.9e-190 667.9 330 100.0
SEGI_01877 Sequoiadendron giganteum HOM05D005908 ORTHO05D007235 6.0e-114 414.8 210 99.0
COL.COLO4_14265 Corchorus olitorius HOM05D005908 ORTHO05D007235 5.7e-56 222.2 266 44.7
PSO782G1770 Papaver somniferum HOM05D005908 ORTHO05D007235 6.3e-55 218.8 254 47.6
PSO478G3277 Papaver somniferum HOM05D005908 ORTHO05D007235 1.8e-54 217.2 253 48.2
Thecc.03G170900 Theobroma cacao HOM05D005908 ORTHO05D007235 2.7e-53 213.4 275 42.9
MBI12_g29759_MAGBIO Magnolia biondii HOM05D005908 ORTHO05D007235 5.9e-53 212.2 240 46.7
Aqoxy7G00441 Aquilegia oxysepala HOM05D005908 ORTHO05D007235 7.7e-53 211.8 243 47.7
Gorai.006G046700 Gossypium raimondii HOM05D005908 ORTHO05D007235 1.0e-52 211.5 264 44.3
Gohir.D09G040800 Gossypium hirsutum HOM05D005908 ORTHO05D007235 1.3e-52 211.1 263 44.5
Dinv35179 Davidia involucrata HOM05D005908 ORTHO05D007235 8.5e-52 208.4 244 45.1
Hma1.2p1_0270F.1_g108430 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 2.5e-51 206.8 250 43.2
TAR375G0795 Trochodendron aralioides HOM05D005908 ORTHO05D007235 3.2e-51 206.5 287 43.6
FvH4_7g15530 Fragaria vesca HOM05D005908 ORTHO05D007235 2.7e-50 203.4 267 43.8
FAN06G2086 Fragaria x ananassa HOM05D005908 ORTHO05D007235 2.7e-50 203.4 267 43.8
FAN06G0652 Fragaria x ananassa HOM05D005908 ORTHO05D007235 3.6e-50 203.0 267 43.8
Nn6g34248 Nelumbo nucifera HOM05D005908 ORTHO05D007235 3.6e-50 203.0 249 44.2
Atru.chr1.515 Acer truncatum HOM05D005908 ORTHO05D007235 6.1e-50 202.2 267 42.7
CAN.G548.2 Capsicum annuum HOM05D005908 ORTHO05D007235 8.0e-50 201.8 255 43.1
FAN03G0397 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.0e-49 201.4 270 43.0
GSVIVG01010617001 Vitis vinifera HOM05D005908 ORTHO05D007235 1.0e-49 201.4 244 45.1
MD13G1243600 Malus domestica HOM05D005908 ORTHO05D007235 1.4e-49 201.1 245 44.9
FAN01G2408 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.8e-49 200.7 267 43.1
RcHm_v2.0_Chr1g0376741 Rosa chinensis HOM05D005908 ORTHO05D007235 1.8e-49 200.7 242 46.3
PGSC0003DMG402014313 Solanum tuberosum HOM05D005908 ORTHO05D007235 1.8e-49 200.7 267 41.6
Solyc03g026200.4 Solanum lycopersicum HOM05D005908 ORTHO05D007235 3.0e-49 199.9 243 44.4
Sopen03g005070 Solanum pennellii HOM05D005908 ORTHO05D007235 3.0e-49 199.9 243 44.4
Potri.015G138400 Populus trichocarpa HOM05D005908 ORTHO05D007235 4.0e-49 199.5 243 43.6
Hund04705 Selenicereus undatus HOM05D005908 ORTHO05D007235 4.0e-49 199.5 308 38.6
FAN10G2728 Fragaria x ananassa HOM05D005908 ORTHO05D007235 5.2e-49 199.1 272 42.6
Ciclev10005584m.g Citrus clementina HOM05D005908 ORTHO05D007235 6.8e-49 198.7 245 43.3
Actinidia32893 Actinidia chinensis HOM05D005908 ORTHO05D007235 8.8e-49 198.4 244 44.3
CsaV3_3G016830 Cucumis sativus L. HOM05D005908 ORTHO05D007235 8.8e-49 198.4 277 42.2
vmacro08977 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 1.2e-48 198.0 251 41.8
CARHR265040 Cardamine hirsuta HOM05D005908 ORTHO05D007235 1.5e-48 197.6 272 40.8
THA.LOC104811995 Tarenaya hassleriana HOM05D005908 ORTHO05D007235 2.0e-48 197.2 242 43.8
ATR0757G107 Amborella trichopoda HOM05D005908 ORTHO05D007235 3.4e-48 196.4 235 44.7
Sabra15G0149500 Salix brachista HOM05D005908 ORTHO05D007235 3.4e-48 196.4 243 43.2
TWI39G0968 Tripterygium wilfordii HOM05D005908 ORTHO05D007235 4.4e-48 196.1 245 44.9
QL09p014976 Quercus lobata HOM05D005908 ORTHO05D007235 5.7e-48 195.7 245 44.5
Thhalv10014339m.g Eutrema salsugineum HOM05D005908 ORTHO05D007235 9.8e-48 194.9 278 39.9
FAN10G3232 Fragaria x ananassa HOM05D005908 ORTHO05D007235 9.8e-48 194.9 272 41.9
Oeu030124.1 Olea europaea HOM05D005908 ORTHO05D007235 9.8e-48 194.9 250 42.0
CiPaw.04G067300 Carya illinoinensis HOM05D005908 ORTHO05D007235 1.3e-47 194.5 245 43.7
ClCG05G007830 Citrullus lanatus HOM05D005908 ORTHO05D007235 1.3e-47 194.5 245 44.5
SGA_v2.0_scaffold2G01076 Striga asiatica HOM05D005908 ORTHO05D007235 1.3e-47 194.5 234 44.9
TWI23G0151 Tripterygium wilfordii HOM05D005908 ORTHO05D007235 1.3e-47 194.5 253 43.1
AT5G52110 Arabidopsis thaliana HOM05D005908 ORTHO05D007235 1.7e-47 194.1 242 42.6
MSTRG.8762 Avicennia marina HOM05D005908 ORTHO05D007235 2.2e-47 193.7 244 41.8
BcaB01g04184 Brassica carinata HOM05D005908 ORTHO05D007235 6.3e-47 192.2 242 42.1
ECA238G1518 Erigeron canadensis HOM05D005908 ORTHO05D007235 8.3e-47 191.8 243 45.3
HanXRQChr07g0206851 Helianthus annuus HOM05D005908 ORTHO05D007235 1.1e-46 191.4 245 42.9
Lj1A993G71 Lonicera japonica HOM05D005908 ORTHO05D007235 1.1e-46 191.4 267 40.8
Sed0015226 Sechium edule HOM05D005908 ORTHO05D007235 1.1e-46 191.4 244 43.4
Aa31LG3G8480 Aethionema arabicum HOM05D005908 ORTHO05D007235 2.4e-46 190.3 241 42.3
Psat1g113160 Pisum sativum HOM05D005908 ORTHO05D007235 3.1e-46 189.9 285 39.3
TPR.G5821 Trifolium pratense HOM05D005908 ORTHO05D007235 5.4e-46 189.1 275 39.3
Mapoly0051s0108 Marchantia polymorpha HOM05D005908 ORTHO05D007235 7.0e-46 188.7 248 42.7
Cpa.g.sc107.9 Carica papaya HOM05D005908 ORTHO05D007235 9.1e-46 188.3 272 39.3
Cc10_g10330 Coffea canephora HOM05D005908 ORTHO05D007235 9.1e-46 188.3 318 38.1
Sp6g14360 Schrenkiella parvula HOM05D005908 ORTHO05D007235 9.1e-46 188.3 242 42.1
SpUn0060_0050 Schrenkiella parvula HOM05D005908 ORTHO05D007235 9.1e-46 188.3 242 42.1
Zm00001eb021390 Zea mays HOM05D005908 ORTHO05D007235 1.2e-45 188.0 266 42.1
AL8G26480 Arabidopsis lyrata HOM05D005908 ORTHO05D007235 1.6e-45 187.6 271 38.0
BraA03t10874Z Brassica rapa HOM05D005908 ORTHO05D007235 1.6e-45 187.6 274 39.4
A03p15840 Brassica napus HOM05D005908 ORTHO05D007235 2.0e-45 187.2 274 39.4
CDE11G0458 Ceratophyllum demersum HOM05D003547 ORTHO05D004236 2.0e-45 187.2 234 43.2
DCAR_009351 Daucus carota HOM05D005908 ORTHO05D007235 2.7e-45 186.8 250 41.2
Carub.0008s1219 Capsella rubella HOM05D005908 ORTHO05D007235 4.5e-45 186.0 242 41.3
Lalb_Chr01g0009141 Lupinus albus HOM05D005908 ORTHO05D007235 4.5e-45 186.0 244 43.0
HPP92_001363 Vanilla planifolia HOM05D005908 ORTHO05D007235 4.5e-45 186.0 240 42.9
Manes.06G144000 Manihot esculenta HOM05D005908 ORTHO05D007235 5.9e-45 185.7 265 40.0
BcaC01g06164 Brassica carinata HOM05D005908 ORTHO05D007235 1.0e-44 184.9 281 39.1
C03p18500 Brassica napus HOM05D005908 ORTHO05D007235 1.0e-44 184.9 281 39.1
BolC3t14247H Brassica oleracea HOM05D005908 ORTHO05D007235 1.0e-44 184.9 281 39.1
Cfa008281 Carpinus fangiana HOM05D005908 ORTHO05D007235 1.0e-44 184.9 234 44.4
Migut.F00374 Erythranthe guttata HOM05D005908 ORTHO05D007235 1.0e-44 184.9 305 37.7
Lsat_1_v5_gn_2_133120 Lactuca sativa HOM05D005908 ORTHO05D007235 1.0e-44 184.9 243 41.2
Eucgr.K00226 Eucalyptus grandis HOM05D005908 ORTHO05D007235 3.8e-44 183.0 245 43.7
Rhsim04G0117700 Rhododendron simsii HOM05D005908 ORTHO05D007235 5.0e-44 182.6 291 36.8
VMungo0464G0636 Vigna mungo HOM05D005908 ORTHO05D007235 8.6e-44 181.8 277 38.3
Ah.13g068320 Amaranthus hybridus HOM05D005908 ORTHO05D007235 1.1e-43 181.4 242 40.1
CANSAT21G0021 Cannabis sativa HOM05D005908 ORTHO05D007235 1.1e-43 181.4 245 41.6
CANSAT21G0323 Cannabis sativa HOM05D005908 ORTHO05D007235 1.9e-43 180.6 245 41.6
AagrBONN_evm.TU.Sc2ySwM_228.723 Anthoceros agrestis HOM05D005908 ORTHO05D007235 3.3e-43 179.9 239 40.2
SalBow1G0690 Salvia bowleyana HOM05D005908 ORTHO05D007235 4.2e-43 179.5 243 42.0
Nitab4.5_0005024g0020 Nicotiana tabacum HOM05D005908 ORTHO05D007235 9.5e-43 178.3 266 38.7
AUR62016029 Chenopodium quinoa HOM05D005908 ORTHO05D007235 3.6e-42 176.4 300 37.3
Glyma.16G198400 Glycine max HOM05D005908 ORTHO05D007235 3.6e-42 176.4 245 41.2
vmacro06719 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 6.1e-42 175.6 262 37.8
Lj4g0016789 Lotus japonicus HOM05D005908 ORTHO05D007235 1.4e-41 174.5 262 38.9
Sc25g0000390 Simmondsia chinensis HOM05D005908 ORTHO05D007235 1.4e-41 174.5 241 41.5
Hma1.2p1_0270F.1_g108420 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 3.0e-41 173.3 250 37.6
Lj2g0007665 Lotus japonicus HOM05D005908 ORTHO05D007235 4.0e-41 172.9 262 38.9
Lj2g0024281 Lotus japonicus HOM05D005908 ORTHO05D007235 5.2e-41 172.6 262 39.7
Prupe.1G077000 Prunus persica HOM05D005908 ORTHO05D007235 1.5e-40 171.0 242 39.7
arahy.Tifrunner.gnm1.ann1.580JC2 Arachis hypogaea HOM05D005908 ORTHO05D007235 2.6e-40 170.2 258 39.5
arahy.Tifrunner.gnm1.ann1.K8NCYF Arachis hypogaea HOM05D005908 ORTHO05D007235 3.4e-40 169.9 258 39.1
Gohir.A09G040000 Gossypium hirsutum HOM05D005908 ORTHO05D007235 5.7e-40 169.1 196 46.4
Pp3c13_15400 Physcomitrium patens HOM05D005908 ORTHO05D007235 5.7e-40 169.1 276 35.1
Nitab4.5_0001083g0110 Nicotiana tabacum HOM05D005908 ORTHO05D007235 5.4e-38 162.5 289 36.3
Haze_13753 Corylus avellana HOM05D005908 ORTHO05D007235 3.9e-36 156.4 187 46.0
SMO364G0827 Selaginella moellendorffii HOM05D005908 ORTHO05D007235 5.0e-36 156.0 235 40.4
EL10Ac3g05695 Beta vulgaris HOM05D005908 ORTHO05D007235 2.0e-32 144.1 186 44.1
AUR62021234 Chenopodium quinoa HOM05D005908 ORTHO05D007235 6.4e-31 139.0 204 40.7
Peaxi162Scf00915g00250 Petunia axillaris HOM05D005908 ORTHO05D007235 6.4e-31 139.0 296 33.8
Phvul.004G121600 Phaseolus vulgaris HOM05D005908 ORTHO05D007235 9.2e-30 135.2 177 41.2
HPP92_001354 Vanilla planifolia HOM05D005908 ORTHO05D007235 1.6e-29 134.4 247 35.2
SMO353G0077 Selaginella moellendorffii HOM05D005908 ORTHO05D007235 3.3e-27 126.7 236 35.6
MELO3C006877.2 Cucumis melo HOM05D005908 ORTHO05D007235 1.6e-26 124.4 262 32.8
unitig_37.g11958 Utricularia gibba HOM05D005908 ORTHO05D007235 2.1e-26 124.0 196 34.2
Cre12.g537850 Chlamydomonas reinhardtii HOM05D005908 ORTHO05D007235 3.1e-25 120.2 256 32.8
MCO01G567 Micromonas commoda HOM05D005908 ORTHO05D007235 2.7e-21 107.1 287 28.6
CBR_g58789 Chara braunii HOM05D005908 ORTHO05D007235 3.5e-21 106.7 146 39.7
vmacro06721 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 2.5e-19 100.5 192 36.5
CSS0026196 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 3.7e-15 86.7 98 38.8
CSS0048064 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 3.7e-15 86.7 98 38.8
FAN03G3234 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.4e-14 84.7 151 35.1
FAN03G2347 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.9e-14 84.3 152 35.5
Actinidia34081 Actinidia chinensis HOM05D005908 ORTHO05D007235 9.2e-14 82.0 144 34.0
Lsat_1_v5_gn_2_133160 Lactuca sativa HOM05D005908 ORTHO05D007235 7.8e-13 79.0 112 41.1
CSS0007682 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 5.1e-12 76.3 90 50.0
Dinv28477 Davidia involucrata HOM05D005908 ORTHO05D007235 1.6e-10 71.2 74 51.4
FAN01G0300 Fragaria x ananassa HOM05D005908 ORTHO05D007235 8.9e-09 65.5 91 37.4
MD16G1250200 Malus domestica HOM05D005908 ORTHO05D007235 6.4e-07 59.3 84 36.9
MELO3C031805.2 Cucumis melo HOM05D005908 ORTHO05D007235 8.4e-07 58.9 56 50.0
Hma1.2p1_0010F.1_g006900 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 2.4e-06 57.4 54 46.3


User provided reference genes

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