Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20406 Sequoiadendron giganteum HOM05D001642 ORTHO05D002129 7.3e-50 200.3 104 100.0
SEGI_17002 Sequoiadendron giganteum HOM05D001642 ORTHO05D002129 7.9e-12 73.9 53 71.7
SEGI_08578 Sequoiadendron giganteum HOM05D001642 ORTHO05D002129 6.3e-09 64.3 66 53.0
TAR365G0482 Trochodendron aralioides HOM05D001642 ORTHO05D002129 2.4e-08 62.4 52 61.5
TAR365G0965 Trochodendron aralioides HOM05D001642 ORTHO05D002129 2.4e-08 62.4 52 61.5
TAR365G0980 Trochodendron aralioides HOM05D001642 ORTHO05D002129 2.4e-08 62.4 52 61.5
Aqoxy5G01998 Aquilegia oxysepala HOM05D001642 ORTHO05D002129 3.1e-08 62.0 49 61.2
CDE12G0244 Ceratophyllum demersum HOM05D001642 ORTHO05D002129 1.5e-07 59.7 45 62.2
CDE01G0203 Ceratophyllum demersum HOM05D001642 ORTHO05D002129 4.5e-07 58.2 45 62.2
Aqoxy5G02766 Aquilegia oxysepala HOM05D001642 ORTHO05D002129 7.7e-07 57.4 49 59.2
PSO017G1336 Papaver somniferum HOM05D001642 ORTHO05D002129 7.7e-07 57.4 49 59.2
Actinidia16891 Actinidia chinensis HOM05D001642 ORTHO05D002129 1.0e-06 57.0 45 60.0
Zm00001eb229990 Zea mays HOM05D001642 ORTHO05D002129 1.0e-06 57.0 53 56.6
CSS0002490 Camellia sinensis var. sinensis HOM05D001642 ORTHO05D002129 1.3e-06 56.6 52 50.0
Prupe.6G306700 Prunus persica HOM05D001642 ORTHO05D002129 1.7e-06 56.2 57 49.1
PSO384G2224 Papaver somniferum HOM05D001642 ORTHO05D002129 2.2e-06 55.8 49 57.1
Rhsim02G0164100 Rhododendron simsii HOM05D001642 ORTHO05D002129 2.2e-06 55.8 44 61.4
SHI18025 Sapria himalayana HOM05D001642 ORTHO05D002129 2.2e-06 55.8 44 61.4
Aqoxy2G01354 Aquilegia oxysepala HOM05D001642 ORTHO05D002129 2.9e-06 55.5 49 53.1
CSS0028187 Camellia sinensis var. sinensis HOM05D001642 ORTHO05D002129 2.9e-06 55.5 52 48.1
CARHR255890 Cardamine hirsuta HOM05D001642 ORTHO05D002129 2.9e-06 55.5 79 40.5
CiPaw.07G034300 Carya illinoinensis HOM05D001642 ORTHO05D002129 2.9e-06 55.5 83 41.0
DCAR_029800 Daucus carota HOM05D001642 ORTHO05D002129 2.9e-06 55.5 44 61.4
Dinv24498 Davidia involucrata HOM05D001642 ORTHO05D002129 2.9e-06 55.5 49 53.1
PSO170G0832 Papaver somniferum HOM05D001642 ORTHO05D002129 2.9e-06 55.5 49 61.2
arahy.Tifrunner.gnm1.ann1.LDJL5U Arachis hypogaea HOM05D001642 ORTHO05D002129 3.8e-06 55.1 103 35.9
CSS0002222 Camellia sinensis var. sinensis HOM05D001642 ORTHO05D002129 3.8e-06 55.1 82 41.5
CSS0026403 Camellia sinensis var. sinensis HOM05D001642 ORTHO05D002129 3.8e-06 55.1 82 41.5
Cfa006743 Carpinus fangiana HOM05D001642 ORTHO05D002129 3.8e-06 55.1 83 38.6
Haze_04013 Corylus avellana HOM05D001642 ORTHO05D002129 3.8e-06 55.1 83 38.6
Os04g0321600 Oryza sativa ssp. japonica HOM05D001642 ORTHO05D002129 3.8e-06 55.1 52 53.8
Os08g0404350 Oryza sativa ssp. japonica HOM05D001642 ORTHO05D002129 3.8e-06 55.1 52 53.8
BcaB05g23889 Brassica carinata HOM05D001642 ORTHO05D002129 5.0e-06 54.7 44 59.1
Migut.N00964 Erythranthe guttata HOM05D001642 ORTHO05D002129 5.0e-06 54.7 43 60.5
QL11p000167 Quercus lobata HOM05D001642 ORTHO05D002129 5.0e-06 54.7 82 40.2
Rhsim11G0099800 Rhododendron simsii HOM05D001642 ORTHO05D002129 5.0e-06 54.7 44 59.1
Solyc01g101020.4 Solanum lycopersicum HOM05D001642 ORTHO05D002129 5.0e-06 54.7 75 44.0
Atru.chr2.1956 Acer truncatum HOM05D001642 ORTHO05D002129 6.5e-06 54.3 49 53.1
MD12G1201600 Malus domestica HOM05D001642 ORTHO05D002129 6.5e-06 54.3 69 46.4
Peaxi162Scf00357g00047 Petunia axillaris HOM05D001642 ORTHO05D002129 6.5e-06 54.3 47 53.2
RcHm_v2.0_Chr2g0111311 Rosa chinensis HOM05D001642 ORTHO05D002129 6.5e-06 54.3 49 53.1
TWI34G1342 Tripterygium wilfordii HOM05D001642 ORTHO05D002129 6.5e-06 54.3 48 54.2
Carub.0006s2948 Capsella rubella HOM05D001642 ORTHO05D002129 8.5e-06 53.9 82 39.0
Lj5C321T4 Lonicera japonica HOM05D001642 ORTHO05D002129 8.5e-06 53.9 44 59.1
MD04G1188800 Malus domestica HOM05D001642 ORTHO05D002129 8.5e-06 53.9 69 44.9
Sopen01g044480 Solanum pennellii HOM05D001642 ORTHO05D002129 8.5e-06 53.9 48 56.2
PGSC0003DMG400018294 Solanum tuberosum HOM05D001642 ORTHO05D002129 8.5e-06 53.9 48 56.2
THA.LOC104815267 Tarenaya hassleriana HOM05D001642 ORTHO05D002129 8.5e-06 53.9 78 39.7


User provided reference genes

Program Settings