Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20307 Sequoiadendron giganteum HOM05D002864 ORTHO05D007972 1.0e-201 706.4 336 100.0
SEGI_33420 Sequoiadendron giganteum HOM05D002864 ORTHO05D007972 1.1e-107 394.0 196 94.9
SabraMtG0009000 Salix brachista HOM05D002864 ORTHO05D007972 1.9e-99 366.7 291 66.3
AT2G07727 Arabidopsis thaliana HOM05D002864 ORTHO05D007972 2.5e-99 366.3 291 66.0
ATMG00220 Arabidopsis thaliana HOM05D002864 ORTHO05D007972 2.5e-99 366.3 291 66.0
A04p09430 Brassica napus HOM05D002864 ORTHO05D007972 2.5e-99 366.3 291 66.0
Thhalv10001270m.g Eutrema salsugineum HOM05D002864 ORTHO05D007972 2.5e-99 366.3 291 66.0
Sp3g25700 Schrenkiella parvula HOM05D002864 ORTHO05D007972 2.5e-99 366.3 291 66.0
Aa31csc705G10 Aethionema arabicum HOM05D002864 ORTHO05D007972 3.3e-99 365.9 291 66.0
SEGI_39586 Sequoiadendron giganteum HOM05D002864 ORTHO05D007972 4.3e-99 365.5 257 72.8
Zm00001eb126090 Zea mays HOM05D002864 ORTHO05D007972 7.3e-99 364.8 290 66.2
Zm00001eb187520 Zea mays HOM05D002864 ORTHO05D007972 7.3e-99 364.8 290 66.2
Zm00001eb436400 Zea mays HOM05D002864 ORTHO05D007972 7.3e-99 364.8 290 66.2
Zm00001eb438850 Zea mays HOM05D002864 ORTHO05D007972 7.3e-99 364.8 290 66.2
Zm00001eb440640 Zea mays HOM05D002864 ORTHO05D007972 7.3e-99 364.8 290 66.2
PGR028G0001 Punica granatum HOM05D002864 ORTHO05D007972 3.6e-98 362.5 291 66.0
CAN.G1321.7 Capsicum annuum HOM05D002864 ORTHO05D007972 1.0e-97 360.9 291 65.6
CAN.G539.2 Capsicum annuum HOM05D002864 ORTHO05D007972 1.0e-97 360.9 291 65.6
Solyc00g500260.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 1.0e-97 360.9 291 65.6
Sopen01g028720 Solanum pennellii HOM05D002864 ORTHO05D007972 1.0e-97 360.9 291 65.6
Ah.10g028190 Amaranthus hybridus HOM05D002864 ORTHO05D007972 1.4e-97 360.5 291 65.6
Ah.10g028740 Amaranthus hybridus HOM05D002864 ORTHO05D007972 1.4e-97 360.5 291 65.6
SHI26646 Sapria himalayana HOM05D002864 ORTHO05D007972 4.0e-97 359.0 302 63.9
Nn1g10178 Nelumbo nucifera HOM05D002864 ORTHO05D007972 5.2e-97 358.6 291 65.6
Gorai.001G162000 Gossypium raimondii HOM05D002864 ORTHO05D007972 6.8e-97 358.2 290 65.5
Solyc00g500312.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 8.9e-97 357.8 291 65.3
arahy.Tifrunner.gnm1.ann1.76QWAA Arachis hypogaea HOM05D002864 ORTHO05D007972 5.8e-96 355.1 291 64.6
arahy.Tifrunner.gnm1.ann1.L9JJXJ Arachis hypogaea HOM05D002864 ORTHO05D007972 5.8e-96 355.1 291 64.6
arahy.Tifrunner.gnm1.ann1.N2KMKI Arachis hypogaea HOM05D002864 ORTHO05D007972 5.8e-96 355.1 291 64.6
RcHm_v2.0_MTg0499071 Rosa chinensis HOM05D002864 ORTHO05D007972 1.3e-95 354.0 291 63.9
arahy.Tifrunner.gnm1.ann1.BSNJ2C Arachis hypogaea HOM05D002864 ORTHO05D007972 1.7e-95 353.6 291 64.3
Peaxi162Scf00296g00719 Petunia axillaris HOM05D002864 ORTHO05D007972 1.7e-95 353.6 300 63.7
LjContig00439g0009771 Lotus japonicus HOM05D002864 ORTHO05D007972 2.2e-95 353.2 291 64.6
LjContig00446g0017432 Lotus japonicus HOM05D002864 ORTHO05D007972 2.2e-95 353.2 291 64.6
unitig_87.g28007 Utricularia gibba HOM05D002864 ORTHO05D007972 2.2e-95 353.2 289 64.7
Lj2C1221T24 Lonicera japonica HOM05D002864 ORTHO05D007972 2.9e-95 352.8 291 64.6
Lalb_Chr00c06g0404551 Lupinus albus HOM05D002864 ORTHO05D007972 3.7e-95 352.4 291 64.3
Lalb_Chr00c21g0405421 Lupinus albus HOM05D002864 ORTHO05D007972 3.7e-95 352.4 291 64.3
Lalb_Chr00c24g0407141 Lupinus albus HOM05D002864 ORTHO05D007972 3.7e-95 352.4 291 64.3
Sed0001516 Sechium edule HOM05D002864 ORTHO05D007972 4.9e-95 352.1 291 63.9
HanXRQChr00c0055g0571421 Helianthus annuus HOM05D002864 ORTHO05D007972 6.4e-95 351.7 292 63.7
HanXRQMTg0579511 Helianthus annuus HOM05D002864 ORTHO05D007972 6.4e-95 351.7 292 63.7
CANSAT16G0027 Cannabis sativa HOM05D002864 ORTHO05D007972 1.1e-94 350.9 289 64.7
SEGI_14242 Sequoiadendron giganteum HOM05D002864 ORTHO05D007972 1.1e-94 350.9 182 91.8
CDE02G2259 Ceratophyllum demersum HOM05D002864 ORTHO05D007972 1.4e-94 350.5 283 65.7
CsaV3_UNG209910 Cucumis sativus L. HOM05D002864 ORTHO05D007972 1.4e-94 350.5 290 63.4
Lsat_1_v5_gn_0_44400 Lactuca sativa HOM05D002864 ORTHO05D007972 3.2e-94 349.4 291 64.3
VMungo0647G2443 Vigna mungo HOM05D002864 ORTHO05D007972 2.0e-93 346.7 277 66.1
Nn1g09936 Nelumbo nucifera HOM05D002864 ORTHO05D007972 4.7e-90 335.5 291 62.9
BraSC48t46333Z Brassica rapa HOM05D002864 ORTHO05D007972 1.3e-87 327.4 207 79.2
BolSC28t60373H Brassica oleracea HOM05D002864 ORTHO05D007972 4.1e-86 322.4 199 80.9
DCAR_032458 Daucus carota HOM05D002864 ORTHO05D007972 5.4e-86 322.0 293 59.4
Nitab4.5_0024895g0020 Nicotiana tabacum HOM05D002864 ORTHO05D007972 9.2e-86 321.2 270 64.1
Nitab4.5_0000120g0110 Nicotiana tabacum HOM05D002864 ORTHO05D007972 4.6e-85 318.9 291 59.8
LjContig00315g0014259 Lotus japonicus HOM05D002864 ORTHO05D007972 3.9e-84 315.8 207 77.3
Lalb_Chr11g0070121 Lupinus albus HOM05D002864 ORTHO05D007972 1.5e-83 313.9 207 76.8
TPR.G36555 Trifolium pratense HOM05D002864 ORTHO05D007972 2.3e-81 306.6 195 79.0
Glyma.05G092000 Glycine max HOM05D002864 ORTHO05D007972 2.9e-79 299.7 207 72.9
HanXRQChr17g0558551 Helianthus annuus HOM05D002864 ORTHO05D007972 2.9e-79 299.7 207 73.4
Solyc00g500240.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 9.5e-75 284.6 252 61.1
Solyc00g500364.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 9.5e-75 284.6 252 61.1
Gohir.A01G126732 Gossypium hirsutum HOM05D002864 ORTHO05D007972 1.6e-74 283.9 190 76.3
SEGI_40151 Sequoiadendron giganteum HOM05D002864 ORTHO05D007972 3.4e-72 276.2 137 97.8
ClCG09G013010 Citrullus lanatus HOM05D002864 ORTHO05D007972 2.9e-63 246.5 252 54.8
CAN.G124.9 Capsicum annuum HOM05D002864 ORTHO05D007972 4.2e-62 242.7 211 63.0
BcaB04g20322 Brassica carinata HOM05D002864 ORTHO05D007972 3.0e-60 236.5 161 75.2
BraSC159t45732Z Brassica rapa HOM05D002864 ORTHO05D007972 2.8e-58 229.9 153 77.8
CAN.G1.12 Capsicum annuum HOM05D002864 ORTHO05D007972 1.4e-57 227.6 147 78.9
SHI26668 Sapria himalayana HOM05D002864 ORTHO05D007972 1.3e-52 211.1 198 58.1
Haze_27081 Corylus avellana HOM05D002864 ORTHO05D007972 1.9e-46 190.7 243 46.5
Psat1g132320 Pisum sativum HOM05D004291 ORTHO05D007972 1.9e-46 190.7 145 67.6
SMO053G0012 Selaginella moellendorffii HOM05D002864 ORTHO05D007972 3.2e-46 189.9 182 56.6
Zm00001eb434710 Zea mays HOM05D002864 ORTHO05D007972 3.0e-44 183.3 166 59.0
SHI33967 Sapria himalayana HOM05D002864 ORTHO05D007972 2.5e-43 180.3 178 54.5
Nitab4.5_0004300g0130 Nicotiana tabacum HOM05D002864 ORTHO05D007972 4.3e-43 179.5 183 57.9
Glyma.07G122200 Glycine max HOM05D002864 ORTHO05D007972 6.7e-36 155.6 167 52.1
Solyc09g050020.3 Solanum lycopersicum HOM05D002864 ORTHO05D007972 1.5e-35 154.5 111 73.0
CAN.G502.16 Capsicum annuum HOM05D002864 ORTHO05D007972 6.9e-33 145.6 155 52.9
CAN.G1082.1 Capsicum annuum HOM05D002864 ORTHO05D007972 4.5e-32 142.9 155 51.6
CAN.G1077.1 Capsicum annuum HOM05D002864 ORTHO05D007972 3.8e-31 139.8 146 50.7
CAN.G1542.5 Capsicum annuum HOM05D002864 ORTHO05D007972 3.7e-26 123.2 92 68.5
ATR0759G021 Amborella trichopoda HOM05D002864 ORTHO05D007972 2.6e-24 117.1 78 70.5
Phvul.003G168500 Phaseolus vulgaris HOM05D002864 ORTHO05D007972 2.6e-24 117.1 72 79.2
Psat6g041400 Pisum sativum HOM05D002864 ORTHO05D007972 8.5e-23 112.1 90 66.7
BraSC177t45745Z Brassica rapa HOM05D002864 ORTHO05D007972 3.3e-19 100.1 72 68.1
CAN.G1001.39 Capsicum annuum HOM05D002864 ORTHO05D007972 9.7e-19 98.6 54 79.6
Nitab4.5_0029129g0010 Nicotiana tabacum HOM05D002864 ORTHO05D007972 1.4e-17 94.7 73 69.9
Haze_27639 Corylus avellana HOM05D002864 ORTHO05D007972 2.4e-17 94.0 103 48.5
CAN.G358.146 Capsicum annuum HOM05D002864 ORTHO05D007972 9.1e-17 92.0 54 77.8
Hund15206 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.5e-16 89.7 235 27.7
Lalb_Chr10g0094511 Lupinus albus HOM05D002864 ORTHO05D007972 1.3e-15 88.2 120 43.3
LjContig00318g0018353 Lotus japonicus HOM05D000580 ORTHO05D001785 2.9e-15 87.0 224 27.2
ClCG07G004380 Citrullus lanatus HOM05D002864 ORTHO05D007972 3.8e-15 86.7 183 33.9
CARHR177290 Cardamine hirsuta HOM05D002864 ORTHO05D007972 8.5e-15 85.5 52 78.8
Duzib026G0003 Durio zibethinus HOM05D000580 ORTHO05D001362 1.1e-14 85.1 250 26.8
Duzib124G0006 Durio zibethinus HOM05D000580 ORTHO05D001362 1.1e-14 85.1 250 26.8
Duzib237G0002 Durio zibethinus HOM05D000580 ORTHO05D001362 1.1e-14 85.1 250 26.8
Duzib256G0004 Durio zibethinus HOM05D000580 ORTHO05D001362 1.1e-14 85.1 250 26.8
Hund04056 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund08804 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund12526 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund19319 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund27466 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund27479 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund27576 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund27594 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund27893 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund27983 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund28047 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund28107 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund28266 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund28324 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund28457 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund28467 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund28486 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund28517 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund28527 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund28630 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund28744 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund28757 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund28844 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund28888 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund29020 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund29034 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund29162 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund29215 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund29226 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund29232 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund29523 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund29532 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund29535 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund29543 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund29548 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund29561 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund29565 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund29572 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund29583 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund29591 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund29600 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund29603 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund29610 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund29665 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund29680 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund29716 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund29876 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund29955 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund30033 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund30067 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund30082 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund30302 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund30445 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund30485 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund30800 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.5e-14 84.0 258 26.0
Hund27960 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.5e-14 82.8 224 26.8
CAN.G1194.10 Capsicum annuum HOM05D002864 ORTHO05D007972 1.2e-13 81.6 54 75.9
MELO3C029979.2 Cucumis melo HOM05D002864 ORTHO05D007972 1.2e-13 81.6 46 87.0
Hund26843 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-13 81.3 258 25.6
Solyc00g500073.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 1.6e-13 81.3 224 26.8
Ah.10g028960 Amaranthus hybridus HOM05D000580 ORTHO05D001785 2.1e-13 80.9 224 26.8
Cfa021369 Carpinus fangiana HOM05D002864 ORTHO05D007972 2.7e-13 80.5 47 83.0
HanXRQChr04g0127521 Helianthus annuus HOM05D000580 ORTHO05D001785 3.6e-13 80.1 274 24.8
Psat1g132440 Pisum sativum HOM05D002864 ORTHO05D007972 6.1e-13 79.3 245 28.6
GSVIVG01018703001 Vitis vinifera HOM05D002864 ORTHO05D007972 8.0e-13 79.0 54 75.9
HanXRQChr04g0094331 Helianthus annuus HOM05D000580 ORTHO05D001785 1.8e-12 77.8 279 24.4
Ah.10g027190 Amaranthus hybridus HOM05D000580 ORTHO05D001785 2.3e-12 77.4 224 26.8
Ah.10g027480 Amaranthus hybridus HOM05D000580 ORTHO05D001785 2.3e-12 77.4 224 26.8
Medtr4g034790 Medicago truncatula HOM05D000580 ORTHO05D001785 1.1e-11 75.1 223 26.5
Hma1.2p1_0218F.1_g092740 Hydrangea macrophylla HOM05D000580 ORTHO05D001785 2.0e-11 74.3 234 26.5
Hund28112 Selenicereus undatus HOM05D002864 ORTHO05D007972 7.4e-11 72.4 44 72.7
Ca_08974_v3 Cicer arietinum L. HOM05D001348 ORTHO05D002788 1.3e-10 71.6 49 65.3
HanXRQChr16g0504981 Helianthus annuus HOM05D002864 ORTHO05D007972 3.7e-10 70.1 105 41.0
Solyc00g047200.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 3.7e-10 70.1 46 67.4
Hma1.2p1_0484F.1_g162980 Hydrangea macrophylla HOM05D002864 ORTHO05D007972 1.1e-09 68.6 46 67.4
Lalb_Chr11g0070191 Lupinus albus HOM05D002864 ORTHO05D007972 2.0e-08 64.3 46 63.0
Aqoxy12s036 Aquilegia oxysepala HOM05D002864 ORTHO05D007972 5.9e-08 62.8 46 63.0
GSVIVG01018702001 Vitis vinifera HOM05D002864 ORTHO05D007972 2.2e-07 60.8 44 63.6
Oeu043609.1 Olea europaea HOM05D002864 ORTHO05D007972 2.9e-07 60.5 52 57.7
LjContig00319g0009538 Lotus japonicus HOM05D000580 ORTHO05D001785 6.5e-07 59.3 120 28.3
Lalb_Chr23g0274211 Lupinus albus HOM05D000580 ORTHO05D001785 8.5e-07 58.9 120 28.3
Psat0s7142g0160 Pisum sativum HOM05D000580 ORTHO05D001785 1.1e-06 58.5 120 28.3
Psat6g181600 Pisum sativum HOM05D000580 ORTHO05D001785 1.1e-06 58.5 120 28.3
Hma1.2p1_0289F.1_g114490 Hydrangea macrophylla HOM05D002864 ORTHO05D007972 9.4e-06 55.5 46 60.9


User provided reference genes

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