Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20150 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 2.5e-96 355.5 187 100.0
SEGI_31410 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 1.4e-78 296.6 180 86.7
SEGI_38690 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 5.1e-78 294.7 173 88.4
SEGI_28956 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 2.8e-68 262.3 180 77.8
SEGI_27643 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 2.9e-65 252.3 180 76.1
SEGI_37981 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 8.0e-63 244.2 184 72.3
SEGI_01959 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 6.7e-62 241.1 184 71.2
SEGI_16551 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 1.5e-61 240.0 180 72.8
SEGI_31280 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 2.9e-57 225.7 191 64.4
SEGI_32376 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 2.9e-57 225.7 191 63.4
SEGI_32223 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 8.0e-47 191.0 131 76.3
SEGI_18072 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 2.3e-46 189.5 184 56.0
SEGI_16242 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 8.8e-46 187.6 180 60.6
SEGI_17447 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 3.7e-44 182.2 184 53.8
SEGI_14260 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 2.4e-43 179.5 160 56.9
SEGI_21743 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 1.2e-42 177.2 184 52.7
SEGI_31649 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 2.3e-41 172.9 183 53.0
SEGI_06336 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 3.3e-40 169.1 179 52.0
SEGI_06635 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 4.3e-40 168.7 176 51.7
SEGI_16500 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 4.3e-40 168.7 176 51.7
SEGI_21533 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 4.3e-40 168.7 176 51.7
SEGI_24178 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 4.3e-40 168.7 176 51.7
SEGI_23854 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 5.6e-40 168.3 176 51.7
SEGI_31607 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 5.6e-40 168.3 176 51.7
SEGI_20228 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 1.2e-39 167.2 178 51.1
SEGI_33910 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 1.2e-39 167.2 176 51.1
SEGI_36143 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 1.2e-39 167.2 179 52.0
SEGI_33591 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 1.6e-39 166.8 176 51.1
SEGI_36585 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 1.6e-39 166.8 176 51.7
SEGI_24246 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 2.1e-39 166.4 183 51.4
SEGI_23016 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 2.8e-39 166.0 176 53.4
SEGI_25824 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 4.7e-39 165.2 179 50.8
SEGI_04497 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 8.0e-39 164.5 176 51.1
SEGI_24393 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 1.4e-38 163.7 176 50.6
SEGI_16686 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 1.8e-38 163.3 178 51.1
SEGI_35512 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 3.0e-38 162.5 176 50.6
SEGI_38212 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 3.0e-38 162.5 176 50.6
SEGI_13680 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 8.9e-38 161.0 175 50.3
SEGI_09316 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 2.0e-37 159.8 175 50.9
SEGI_36652 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 2.0e-37 159.8 175 50.9
SEGI_15192 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 5.7e-37 158.3 176 50.0
SEGI_21469 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 5.7e-37 158.3 178 49.4
SEGI_33546 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 5.7e-37 158.3 176 50.0
SEGI_05651 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 2.9e-36 156.0 176 50.0
SEGI_05176 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 3.7e-36 155.6 184 48.4
SEGI_30909 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 5.4e-35 151.8 190 45.8
SEGI_01245 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 4.6e-34 148.7 180 47.2
SEGI_00679 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 8.6e-33 144.4 184 46.7
SEGI_38047 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 4.3e-32 142.1 165 48.5
SEGI_05071 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 9.5e-32 141.0 185 45.4
SEGI_34155 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 5.2e-30 135.2 178 46.1
SEGI_08943 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 6.4e-28 128.3 175 44.6
SEGI_08111 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 6.6e-25 118.2 160 45.0
SEGI_18847 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 9.5e-24 114.4 106 55.7
SEGI_41182 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 2.1e-18 96.7 124 46.0
SEGI_01198 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 4.6e-18 95.5 151 40.4
SEGI_35732 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 4.3e-16 89.0 117 47.9
SEGI_13841 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 3.1e-14 82.8 71 60.6
Pp3c20_10450 Physcomitrium patens HOM05D000824 ORTHO05D002221 1.7e-12 77.0 106 41.5
Pp3c23_16880 Physcomitrium patens HOM05D000824 ORTHO05D002221 2.9e-12 76.3 106 40.6
CDE11G0897 Ceratophyllum demersum HOM05D000824 ORTHO05D002221 9.2e-11 71.2 106 38.7
HanXRQChr10g0319611 Helianthus annuus HOM05D000824 ORTHO05D002221 1.6e-10 70.5 205 29.3
SMO115G0028 Selaginella moellendorffii HOM05D000824 ORTHO05D002221 2.1e-10 70.1 107 37.4
SEGI_17936 Sequoiadendron giganteum HOM05D000824 ORTHO05D002221 3.5e-10 69.3 108 41.7
EL10Ac5g11968 Beta vulgaris HOM05D000824 ORTHO05D002221 7.8e-10 68.2 132 37.9
CBR_g36292 Chara braunii HOM05D000824 ORTHO05D002221 7.8e-10 68.2 114 35.1
Dinv22867 Davidia involucrata HOM05D000824 ORTHO05D002221 7.8e-10 68.2 110 42.7
SEGI_20798 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 7.8e-10 68.2 91 50.5
Dinv28015 Davidia involucrata HOM05D000824 ORTHO05D002221 1.0e-09 67.8 235 28.9
SMO119G0217 Selaginella moellendorffii HOM05D000824 ORTHO05D002221 1.0e-09 67.8 223 26.0
AUR62007386 Chenopodium quinoa HOM05D000824 ORTHO05D002221 3.0e-09 66.2 108 38.9
AUR62018601 Chenopodium quinoa HOM05D000824 ORTHO05D002221 3.9e-09 65.9 108 39.8
SHI07207 Sapria himalayana HOM05D000824 ORTHO05D002221 3.9e-09 65.9 129 38.0
TPR.G17277 Trifolium pratense HOM05D000824 ORTHO05D002221 3.9e-09 65.9 113 34.5
CiPaw.03G209600 Carya illinoinensis HOM05D000824 ORTHO05D002221 6.6e-09 65.1 205 28.8
CDE01G0675 Ceratophyllum demersum HOM05D000824 ORTHO05D002221 8.6e-09 64.7 177 29.9
AL7G34960 Arabidopsis lyrata HOM05D000824 ORTHO05D002221 1.1e-08 64.3 113 35.4
MSTRG.25728 Avicennia marina HOM05D000824 ORTHO05D002221 1.1e-08 64.3 110 40.9
CSS0020965 Camellia sinensis var. sinensis HOM05D000824 ORTHO05D002221 1.1e-08 64.3 204 28.4
Mapoly0125s0021 Marchantia polymorpha HOM05D000824 ORTHO05D002221 1.1e-08 64.3 152 32.9
SEGI_02899 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 1.1e-08 64.3 78 46.2
CDE06G1892 Ceratophyllum demersum HOM05D000824 ORTHO05D002221 1.5e-08 63.9 217 25.3
Haze_25975 Corylus avellana HOM05D000824 ORTHO05D002221 1.5e-08 63.9 205 28.3
ECA246G1424 Erigeron canadensis HOM05D000824 ORTHO05D002221 1.9e-08 63.5 120 34.2
Glyma.09G213300 Glycine max HOM05D000824 ORTHO05D010437 1.9e-08 63.5 103 35.9
Medtr2g041270 Medicago truncatula HOM05D000824 ORTHO05D002221 1.9e-08 63.5 205 27.8
arahy.Tifrunner.gnm1.ann1.71ADJA Arachis hypogaea HOM05D000824 ORTHO05D002221 2.5e-08 63.2 207 26.1
arahy.Tifrunner.gnm1.ann1.D7TWRW Arachis hypogaea HOM05D000824 ORTHO05D002221 2.5e-08 63.2 207 26.1
HPP92_014304 Vanilla planifolia HOM05D000824 ORTHO05D002221 2.5e-08 63.2 146 31.5
SEGI_36496 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 3.3e-08 62.8 191 26.7
Ah.09g231350 Amaranthus hybridus HOM05D000824 ORTHO05D002221 4.3e-08 62.4 205 25.9
CSS0033943 Camellia sinensis var. sinensis HOM05D000824 ORTHO05D002221 4.3e-08 62.4 132 34.8
DCAR_004240 Daucus carota HOM05D000824 ORTHO05D010357 4.3e-08 62.4 135 29.6
Sed0015067 Sechium edule HOM05D000824 ORTHO05D002221 4.3e-08 62.4 205 27.3
Actinidia39675 Actinidia chinensis HOM05D000824 ORTHO05D002221 5.6e-08 62.0 207 28.5
AUR62025182 Chenopodium quinoa HOM05D000824 ORTHO05D002221 5.6e-08 62.0 205 26.3
Hma1.2p1_0544F.1_g175470 Hydrangea macrophylla HOM05D000824 ORTHO05D002221 5.6e-08 62.0 175 32.6
SEGI_34998 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 5.6e-08 62.0 87 43.7
Manes.17G003800 Manihot esculenta HOM05D000824 ORTHO05D002221 7.3e-08 61.6 141 33.3
Manes.17G004337 Manihot esculenta HOM05D000824 ORTHO05D002221 7.3e-08 61.6 141 33.3
Hund26003 Selenicereus undatus HOM05D000824 ORTHO05D002221 7.3e-08 61.6 204 25.5
TAR624G0651 Trochodendron aralioides HOM05D000824 ORTHO05D002221 7.3e-08 61.6 205 27.8
Aa31LG6G1820 Aethionema arabicum HOM05D000824 ORTHO05D002221 9.6e-08 61.2 119 37.0
Aqoxy7G04110 Aquilegia oxysepala HOM05D000824 ORTHO05D002221 9.6e-08 61.2 216 27.3
Aqoxy7G04112 Aquilegia oxysepala HOM05D000824 ORTHO05D002221 9.6e-08 61.2 216 26.4
Manes.03G038600 Manihot esculenta HOM05D000824 ORTHO05D002221 9.6e-08 61.2 106 34.9
Actinidia32773 Actinidia chinensis HOM05D000824 ORTHO05D002221 1.2e-07 60.8 142 33.1
Migut.A00558 Erythranthe guttata HOM05D000824 ORTHO05D002221 1.2e-07 60.8 141 37.6
Psat1g132720 Pisum sativum HOM05D000824 ORTHO05D002221 1.2e-07 60.8 215 25.1
RcHm_v2.0_Chr2g0094351 Rosa chinensis HOM05D000824 ORTHO05D002221 1.2e-07 60.8 129 32.6
Sabra03G0069900 Salix brachista HOM05D000824 ORTHO05D002221 1.6e-07 60.5 142 35.9
TPR.G29493 Trifolium pratense HOM05D000824 ORTHO05D002221 1.6e-07 60.5 206 26.7
CANSAT56G3947 Cannabis sativa HOM05D000824 ORTHO05D002221 2.1e-07 60.1 204 25.5
CsaV3_3G001070 Cucumis sativus L. HOM05D000824 ORTHO05D002221 2.1e-07 60.1 91 35.2
FvH4_5g23941 Fragaria vesca HOM05D000824 ORTHO05D002221 2.1e-07 60.1 124 35.5
FAN18G2954 Fragaria x ananassa HOM05D000824 ORTHO05D002221 2.1e-07 60.1 124 35.5
FAN18G3561 Fragaria x ananassa HOM05D000824 ORTHO05D002221 2.1e-07 60.1 124 35.5
SGA_v2.0_scaffold89G27397 Striga asiatica HOM05D000824 ORTHO05D002221 2.8e-07 59.7 124 33.1
ECA246G2513 Erigeron canadensis HOM05D000824 ORTHO05D002221 3.6e-07 59.3 93 33.3
Peaxi162Scf00724g00059 Petunia axillaris HOM05D000824 ORTHO05D002221 3.6e-07 59.3 221 27.1
QL02p061033 Quercus lobata HOM05D000824 ORTHO05D002221 3.6e-07 59.3 205 25.4
TWI34G1166 Tripterygium wilfordii HOM05D000824 ORTHO05D002221 3.6e-07 59.3 205 26.3
Ca_13349_v3 Cicer arietinum L. HOM05D000824 ORTHO05D002221 4.7e-07 58.9 218 26.1
Migut.J00947 Erythranthe guttata HOM05D000824 ORTHO05D002221 4.7e-07 58.9 219 26.0
Lsat_1_v5_gn_3_26741 Lactuca sativa HOM05D000824 ORTHO05D002221 4.7e-07 58.9 162 32.1
SEGI_17394 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 4.7e-07 58.9 78 42.3
Solyc05g025590.4 Solanum lycopersicum HOM05D000824 ORTHO05D002221 4.7e-07 58.9 211 26.5
Cc06_g11960 Coffea canephora HOM05D000824 ORTHO05D002221 6.2e-07 58.5 106 34.9
FAN13G0731 Fragaria x ananassa HOM05D000824 ORTHO05D002221 6.2e-07 58.5 124 35.5
Glyma.15G174100 Glycine max HOM05D000824 ORTHO05D002221 6.2e-07 58.5 215 25.6
Potri.003G102700 Populus trichocarpa HOM05D000824 ORTHO05D002221 6.2e-07 58.5 138 34.8
Lj8C334G12 Lonicera japonica HOM05D000824 ORTHO05D002221 8.1e-07 58.2 112 35.7
Lj6g0016995 Lotus japonicus HOM05D000824 ORTHO05D002221 8.1e-07 58.2 203 24.6
MD15G1214800 Malus domestica HOM05D000824 ORTHO05D002221 8.1e-07 58.2 106 33.0
RcHm_v2.0_Chr7g0213381 Rosa chinensis HOM05D000824 ORTHO05D002221 8.1e-07 58.2 76 39.5
Lalb_Chr08g0232511 Lupinus albus HOM05D000824 ORTHO05D002221 1.1e-06 57.8 209 24.4
SEGI_20289 Sequoiadendron giganteum HOM05D000824 ORTHO05D002221 1.1e-06 57.8 150 25.3
MELO3C013797.2 Cucumis melo HOM05D000824 ORTHO05D002221 1.4e-06 57.4 110 33.6
FAN04G2448 Fragaria x ananassa HOM05D000824 ORTHO05D002221 1.4e-06 57.4 124 34.7
FAN08G2719 Fragaria x ananassa HOM05D000824 ORTHO05D002221 1.4e-06 57.4 124 35.5
Sed0000920 Sechium edule HOM05D000824 ORTHO05D002221 1.4e-06 57.4 113 33.6
CARHR103830 Cardamine hirsuta HOM05D000824 ORTHO05D002221 1.8e-06 57.0 215 24.2
vmacro00064 Vaccinium macrocarpon HOM05D000824 ORTHO05D002221 1.8e-06 57.0 150 34.0
SEGI_16695 Sequoiadendron giganteum HOM05D000824 ORTHO05D002221 2.4e-06 56.6 168 27.4
Sc19g0001900 Simmondsia chinensis HOM05D000824 ORTHO05D002221 2.4e-06 56.6 210 26.2
Atru.chr8.1429 Acer truncatum HOM05D000824 ORTHO05D002221 3.1e-06 56.2 143 34.3
Sabra18G0057900 Salix brachista HOM05D000824 ORTHO05D002221 3.1e-06 56.2 112 33.0
SEGI_11783 Sequoiadendron giganteum HOM05D000824 ORTHO05D002221 4.0e-06 55.8 167 24.6
PGSC0003DMG400044420 Solanum tuberosum HOM05D000824 ORTHO05D002221 4.0e-06 55.8 109 35.8
Ca_25103_v3 Cicer arietinum L. HOM05D000824 ORTHO05D002221 5.2e-06 55.5 131 31.3
arahy.Tifrunner.gnm1.ann1.Y7GC2W Arachis hypogaea HOM05D000824 ORTHO05D002221 6.8e-06 55.1 219 24.7
SEGI_11169 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 6.8e-06 55.1 145 32.4
SEGI_40163 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 6.8e-06 55.1 117 31.6
SGA_v2.0_scaffold96G29068 Striga asiatica HOM05D000824 ORTHO05D002221 6.8e-06 55.1 128 31.2
Atru.chr7.1670 Acer truncatum HOM05D000824 ORTHO05D002221 8.9e-06 54.7 106 34.0
PSO782G4142 Papaver somniferum HOM05D000824 ORTHO05D002221 8.9e-06 54.7 145 33.1


User provided reference genes

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