Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20006 Sequoiadendron giganteum HOM05D001304 ORTHO05D003803 7.4e-124 447.2 224 100.0
Lalb_Chr09g0325801 Lupinus albus HOM05D001304 ORTHO05D003803 1.1e-13 81.3 46 78.3
COL.COLO4_11684 Corchorus olitorius HOM05D001304 ORTHO05D003803 3.1e-13 79.7 46 76.1
Lalb_Chr05g0216211 Lupinus albus HOM05D001304 ORTHO05D003803 3.1e-13 79.7 46 76.1
A06p32460 Brassica napus HOM05D001304 ORTHO05D003803 4.1e-13 79.3 46 71.7
BraA06t26170Z Brassica rapa HOM05D001304 ORTHO05D003803 4.1e-13 79.3 46 71.7
AL112U10040 Arabidopsis lyrata HOM05D001304 ORTHO05D003803 5.3e-13 79.0 46 71.7
Thecc.01G084400 Theobroma cacao HOM05D001304 ORTHO05D003803 5.3e-13 79.0 46 76.1
Gohir.D12G080400 Gossypium hirsutum HOM05D001304 ORTHO05D003803 6.9e-13 78.6 46 73.9
Gorai.008G088700 Gossypium raimondii HOM05D001304 ORTHO05D003803 6.9e-13 78.6 46 73.9
CSS0040295 Camellia sinensis var. sinensis HOM05D001304 ORTHO05D003803 9.0e-13 78.2 46 73.9
Cpa.g.sc129.15 Carica papaya HOM05D001304 ORTHO05D003803 9.0e-13 78.2 46 76.1
Carub.0006s0902 Capsella rubella HOM05D001304 ORTHO05D003803 1.2e-12 77.8 46 73.9
Solyc02g091580.4 Solanum lycopersicum HOM05D001304 ORTHO05D003803 1.2e-12 77.8 46 71.7
unitig_736.g22352 Utricularia gibba HOM05D001304 ORTHO05D003803 1.2e-12 77.8 46 71.7
C03p60130 Brassica napus HOM05D001304 ORTHO05D003803 1.5e-12 77.4 46 69.6
BolC3t18277H Brassica oleracea HOM05D001304 ORTHO05D003803 1.5e-12 77.4 46 69.6
FvH4_1g19050 Fragaria vesca HOM05D001304 ORTHO05D003803 1.5e-12 77.4 46 73.9
FAN19G0255 Fragaria x ananassa HOM05D001304 ORTHO05D003803 1.5e-12 77.4 46 73.9
FAN26G1340 Fragaria x ananassa HOM05D001304 ORTHO05D003803 1.5e-12 77.4 46 73.9
FAN28G2550 Fragaria x ananassa HOM05D001304 ORTHO05D003803 1.5e-12 77.4 46 73.9
Glyma.01G020300 Glycine max HOM05D001304 ORTHO05D003803 1.5e-12 77.4 46 73.9
Prupe.6G167100 Prunus persica HOM05D001304 ORTHO05D003803 1.5e-12 77.4 46 73.9
Prupe.6G209200 Prunus persica HOM05D001304 ORTHO05D003803 1.5e-12 77.4 46 73.9
SalBow3G2076 Salvia bowleyana HOM05D001304 ORTHO05D003803 1.5e-12 77.4 46 71.7
SalBow3G4364 Salvia bowleyana HOM05D001304 ORTHO05D003803 1.5e-12 77.4 46 71.7
CARHR202760 Cardamine hirsuta HOM05D001304 ORTHO05D003803 2.0e-12 77.0 46 69.6
Aqoxy6G00643 Aquilegia oxysepala HOM05D001304 ORTHO05D003803 2.6e-12 76.6 46 71.7
CsaV3_4G008500 Cucumis sativus L. HOM05D001304 ORTHO05D003803 2.6e-12 76.6 46 71.7
FAN23G1646 Fragaria x ananassa HOM05D001304 ORTHO05D003803 2.6e-12 76.6 46 73.9
Gohir.A12G082400 Gossypium hirsutum HOM05D001304 ORTHO05D003803 2.6e-12 76.6 46 71.7
PGSC0003DMG400030613 Solanum tuberosum HOM05D001304 ORTHO05D003803 2.6e-12 76.6 46 69.6
Dinv29403 Davidia involucrata HOM05D001304 ORTHO05D003803 3.4e-12 76.3 46 69.6
Thhalv10012826m.g Eutrema salsugineum HOM05D001304 ORTHO05D003803 3.4e-12 76.3 46 69.6
Nitab4.5_0000291g0100 Nicotiana tabacum HOM05D001304 ORTHO05D003803 3.4e-12 76.3 46 69.6
Nitab4.5_0007512g0010 Nicotiana tabacum HOM05D001304 ORTHO05D003803 3.4e-12 76.3 46 69.6
RcHm_v2.0_Chr2g0110061 Rosa chinensis HOM05D001304 ORTHO05D003803 3.4e-12 76.3 46 71.7
Sabra14G0001500 Salix brachista HOM05D001304 ORTHO05D003803 3.4e-12 76.3 46 71.7
Sopen02g036200 Solanum pennellii HOM05D001304 ORTHO05D003803 3.4e-12 76.3 46 69.6
GSVIVG01003850001 Vitis vinifera HOM05D001304 ORTHO05D003803 3.4e-12 76.3 46 69.6
arahy.Tifrunner.gnm1.ann1.2M0S5R Arachis hypogaea HOM05D001304 ORTHO05D003803 4.5e-12 75.9 46 71.7
arahy.Tifrunner.gnm1.ann1.NJ8Y8Y Arachis hypogaea HOM05D001304 ORTHO05D003803 4.5e-12 75.9 46 71.7
arahy.Tifrunner.gnm1.ann1.U4N2LF Arachis hypogaea HOM05D001304 ORTHO05D003803 4.5e-12 75.9 46 71.7
arahy.Tifrunner.gnm1.ann1.Y7B72I Arachis hypogaea HOM05D001304 ORTHO05D003803 4.5e-12 75.9 46 71.7
ECA238G0162 Erigeron canadensis HOM05D001304 ORTHO05D003803 4.5e-12 75.9 46 71.7
Gorai.007G230700 Gossypium raimondii HOM05D001304 ORTHO05D003803 4.5e-12 75.9 46 71.7
VMungo1215G0027 Vigna mungo HOM05D001304 ORTHO05D003803 4.5e-12 75.9 46 71.7
AL8G43210 Arabidopsis lyrata HOM05D001304 ORTHO05D003803 5.9e-12 75.5 46 69.6
AT5G10540 Arabidopsis thaliana HOM05D001304 ORTHO05D003803 5.9e-12 75.5 46 69.6
AT5G65620 Arabidopsis thaliana HOM05D001304 ORTHO05D003803 5.9e-12 75.5 46 69.6
BcaC01g02851 Brassica carinata HOM05D001304 ORTHO05D003803 5.9e-12 75.5 46 69.6
Carub.0008s2649 Capsella rubella HOM05D001304 ORTHO05D003803 5.9e-12 75.5 46 69.6
CAN.G1061.30 Capsicum annuum HOM05D001304 ORTHO05D003803 5.9e-12 75.5 46 67.4
CARHR279570 Cardamine hirsuta HOM05D001304 ORTHO05D003803 5.9e-12 75.5 46 69.6
MBI16_g10449_MAGBIO Magnolia biondii HOM05D001304 ORTHO05D003803 5.9e-12 75.5 46 71.7
PSO017G2184 Papaver somniferum HOM05D001304 ORTHO05D003803 5.9e-12 75.5 46 69.6
Sp6g32890 Schrenkiella parvula HOM05D001304 ORTHO05D003803 5.9e-12 75.5 46 69.6
THA.LOC104798525 Tarenaya hassleriana HOM05D001304 ORTHO05D003803 5.9e-12 75.5 54 64.8
Ca_13465_v3 Cicer arietinum L. HOM05D001304 ORTHO05D003803 7.7e-12 75.1 46 69.6
Haze_03928 Corylus avellana HOM05D001304 ORTHO05D003803 7.7e-12 75.1 46 69.6
Peaxi162Scf00703g00111 Petunia axillaris HOM05D001304 ORTHO05D003803 7.7e-12 75.1 46 69.6
Sp2g28710 Schrenkiella parvula HOM05D001304 ORTHO05D003803 7.7e-12 75.1 46 69.6
Atru.chr3.1158 Acer truncatum HOM05D001304 ORTHO05D003803 1.0e-11 74.7 46 69.6
Atru.chr3.1175 Acer truncatum HOM05D001304 ORTHO05D003803 1.0e-11 74.7 46 69.6
AL6G21070 Arabidopsis lyrata HOM05D001304 ORTHO05D003803 1.0e-11 74.7 46 67.4
BcaB01g05521 Brassica carinata HOM05D001304 ORTHO05D003803 1.0e-11 74.7 46 69.6
C03p05320 Brassica napus HOM05D001304 ORTHO05D003803 1.0e-11 74.7 46 69.6
BolC3t13045H Brassica oleracea HOM05D001304 ORTHO05D003803 1.0e-11 74.7 46 69.6
Cfa006834 Carpinus fangiana HOM05D001304 ORTHO05D003803 1.0e-11 74.7 46 69.6
CDE02G1292 Ceratophyllum demersum HOM05D001304 ORTHO05D003803 1.0e-11 74.7 46 69.6
Ciclev10024919m.g Citrus clementina HOM05D001304 ORTHO05D003803 1.0e-11 74.7 46 71.7
Duzib147G1544 Durio zibethinus HOM05D001304 ORTHO05D003803 1.0e-11 74.7 46 71.7
Gohir.A11G208500 Gossypium hirsutum HOM05D001304 ORTHO05D003803 1.0e-11 74.7 46 69.6
MD01G1044200 Malus domestica HOM05D001304 ORTHO05D003803 1.0e-11 74.7 46 69.6
Oeu054746.2 Olea europaea HOM05D001304 ORTHO05D003803 1.0e-11 74.7 43 76.7
PSO478G2230 Papaver somniferum HOM05D001304 ORTHO05D003803 1.0e-11 74.7 46 69.6
BcaB05g21489 Brassica carinata HOM05D001304 ORTHO05D003803 1.3e-11 74.3 46 69.6
CiPaw.08G145000 Carya illinoinensis HOM05D001304 ORTHO05D003803 1.3e-11 74.3 46 69.6
Gohir.D11G214900 Gossypium hirsutum HOM05D001304 ORTHO05D003803 1.3e-11 74.3 46 69.6
Lj2g0015774 Lotus japonicus HOM05D001304 ORTHO05D003803 1.3e-11 74.3 46 69.6
Nn1g05669 Nelumbo nucifera HOM05D001304 ORTHO05D003803 1.3e-11 74.3 46 69.6
Sabra14G0004300 Salix brachista HOM05D001304 ORTHO05D003803 1.3e-11 74.3 43 74.4
Sed0016167 Sechium edule HOM05D001304 ORTHO05D003803 1.3e-11 74.3 46 69.6
Sc16g0000720 Simmondsia chinensis HOM05D001304 ORTHO05D003803 1.3e-11 74.3 46 71.7
Actinidia24167 Actinidia chinensis HOM05D001304 ORTHO05D003803 1.7e-11 73.9 46 71.7
Glyma.09G202100 Glycine max HOM05D001304 ORTHO05D003803 1.7e-11 73.9 146 37.0
Lj2C429T16 Lonicera japonica HOM05D001304 ORTHO05D003803 1.7e-11 73.9 46 69.6
Potri.007G004600 Populus trichocarpa HOM05D001304 ORTHO05D003803 1.7e-11 73.9 46 69.6
QL06p037353 Quercus lobata HOM05D001304 ORTHO05D003803 1.7e-11 73.9 46 69.6
ClCG07G009830 Citrullus lanatus HOM05D001304 ORTHO05D003803 2.2e-11 73.6 46 69.6
Oeu007435.1 Olea europaea HOM05D001304 ORTHO05D003803 2.2e-11 73.6 46 69.6
PGR031G2110 Punica granatum HOM05D001304 ORTHO05D003803 2.2e-11 73.6 46 69.6
TWI77G0616 Tripterygium wilfordii HOM05D001304 ORTHO05D003803 2.2e-11 73.6 46 71.7
MELO3C016079.2 Cucumis melo HOM05D001304 ORTHO05D003803 2.9e-11 73.2 46 69.6
DCAR_021620 Daucus carota HOM05D001304 ORTHO05D003803 2.9e-11 73.2 46 69.6
Lsat_1_v5_gn_2_82261 Lactuca sativa HOM05D001304 ORTHO05D003803 2.9e-11 73.2 46 67.4
Lj4A176T36 Lonicera japonica HOM05D001304 ORTHO05D003803 2.9e-11 73.2 46 67.4
Manes.13G103984 Manihot esculenta HOM05D001304 ORTHO05D003803 2.9e-11 73.2 46 69.6
Medtr5g030940 Medicago truncatula HOM05D001304 ORTHO05D003803 2.9e-11 73.2 46 67.4
TPR.G37069 Trifolium pratense HOM05D001304 ORTHO05D003803 2.9e-11 73.2 46 67.4
TWI53G1123 Tripterygium wilfordii HOM05D001304 ORTHO05D003803 2.9e-11 73.2 46 71.7
MSTRG.23623 Avicennia marina HOM05D001304 ORTHO05D003803 3.8e-11 72.8 46 67.4
CiPaw.07G043000 Carya illinoinensis HOM05D001304 ORTHO05D003803 3.8e-11 72.8 46 67.4
DCAR_025863 Daucus carota HOM05D001304 ORTHO05D003803 3.8e-11 72.8 46 67.4
Nn5g29786 Nelumbo nucifera HOM05D001304 ORTHO05D003803 3.8e-11 72.8 46 67.4
Oeu050982.2 Olea europaea HOM05D001304 ORTHO05D003803 3.8e-11 72.8 51 64.7
Phvul.002G143600 Phaseolus vulgaris HOM05D001304 ORTHO05D003803 3.8e-11 72.8 46 67.4
Cc00_g02850 Coffea canephora HOM05D001304 ORTHO05D003803 5.0e-11 72.4 46 65.2
Psat2g133960 Pisum sativum HOM05D001304 ORTHO05D003803 5.0e-11 72.4 46 69.6
Actinidia15931 Actinidia chinensis HOM05D001304 ORTHO05D003803 6.5e-11 72.0 46 65.2
CAN.G1061.35 Capsicum annuum HOM05D001304 ORTHO05D003803 6.5e-11 72.0 46 65.2
AUR62005895 Chenopodium quinoa HOM05D001304 ORTHO05D003803 6.5e-11 72.0 54 59.3
Migut.H00290 Erythranthe guttata HOM05D001304 ORTHO05D003803 6.5e-11 72.0 46 67.4
Eucgr.I00594 Eucalyptus grandis HOM05D001304 ORTHO05D003803 6.5e-11 72.0 46 69.6
Eucgr.L02517 Eucalyptus grandis HOM05D001304 ORTHO05D003803 6.5e-11 72.0 46 69.6
vmacro18038 Vaccinium macrocarpon HOM05D001304 ORTHO05D003803 6.5e-11 72.0 43 69.8
BcaC03g13317 Brassica carinata HOM05D001304 ORTHO05D003803 8.5e-11 71.6 46 67.4
AUR62032883 Chenopodium quinoa HOM05D001304 ORTHO05D003803 8.5e-11 71.6 124 39.5
Thhalv10003666m.g Eutrema salsugineum HOM05D001304 ORTHO05D003803 8.5e-11 71.6 46 67.4
A03p04640 Brassica napus HOM05D001304 ORTHO05D003803 1.1e-10 71.2 45 66.7
BraA03t09805Z Brassica rapa HOM05D001304 ORTHO05D003803 1.1e-10 71.2 45 66.7
CSS0022889 Camellia sinensis var. sinensis HOM05D001304 ORTHO05D003803 1.1e-10 71.2 46 63.0
HanXRQChr14g0447101 Helianthus annuus HOM05D001304 ORTHO05D003803 1.1e-10 71.2 46 65.2
Mapoly0137s0031 Marchantia polymorpha HOM05D001304 ORTHO05D003803 1.1e-10 71.2 46 65.2
Atru.chr3.1159 Acer truncatum HOM05D001304 ORTHO05D003803 1.4e-10 70.9 46 67.4
Atru.chr3.1176 Acer truncatum HOM05D001304 ORTHO05D003803 1.4e-10 70.9 46 67.4
Os02g0830100 Oryza sativa ssp. japonica HOM05D001304 ORTHO05D003803 1.4e-10 70.9 46 67.4
EL10Ac6g13308 Beta vulgaris HOM05D001304 ORTHO05D003803 1.9e-10 70.5 129 36.4
Dinv27004 Davidia involucrata HOM05D001304 ORTHO05D003803 1.9e-10 70.5 46 63.0
Potri.014G010100 Populus trichocarpa HOM05D001304 ORTHO05D003803 1.9e-10 70.5 46 67.4
Sabra07G0003300 Salix brachista HOM05D001304 ORTHO05D003803 1.9e-10 70.5 46 65.2
Hund14168 Selenicereus undatus HOM05D001304 ORTHO05D003803 1.9e-10 70.5 46 67.4
GSVIVG01031425001 Vitis vinifera HOM05D001304 ORTHO05D003803 1.9e-10 70.5 46 65.2
Actinidia22785 Actinidia chinensis HOM05D001304 ORTHO05D003803 2.5e-10 70.1 46 67.4
DCAR_021641 Daucus carota HOM05D001304 ORTHO05D003803 2.5e-10 70.1 46 67.4
QL01p014133 Quercus lobata HOM05D001304 ORTHO05D003803 2.5e-10 70.1 46 67.4
Rhsim10G0080000 Rhododendron simsii HOM05D001304 ORTHO05D003803 2.5e-10 70.1 45 64.4
HPP92_025840 Vanilla planifolia HOM05D001304 ORTHO05D003803 2.5e-10 70.1 46 65.2
Zm00001eb259450 Zea mays HOM05D001304 ORTHO05D003803 2.5e-10 70.1 46 65.2
Cc07_g07930 Coffea canephora HOM05D001304 ORTHO05D003803 3.2e-10 69.7 46 63.0
DCAR_010514 Daucus carota HOM05D001304 ORTHO05D003803 3.2e-10 69.7 43 69.8
SGA_v2.0_scaffold121G33140 Striga asiatica HOM05D001304 ORTHO05D003803 3.2e-10 69.7 43 67.4
CSS0037118 Camellia sinensis var. sinensis HOM05D001304 ORTHO05D003803 4.2e-10 69.3 46 60.9
CAN.G1061.33 Capsicum annuum HOM05D001304 ORTHO05D003803 4.2e-10 69.3 43 67.4
Hma1.2p1_0080F.1_g042070 Hydrangea macrophylla HOM05D001304 ORTHO05D003803 4.2e-10 69.3 46 63.0
Rhsim10G0079900 Rhododendron simsii HOM05D001304 ORTHO05D003803 5.5e-10 68.9 44 63.6
A02p00550 Brassica napus HOM05D001304 ORTHO05D003803 7.2e-10 68.6 45 64.4
BraA02t05038Z Brassica rapa HOM05D001304 ORTHO05D003803 7.2e-10 68.6 45 64.4
HanXRQChr12g0375551 Helianthus annuus HOM05D001304 ORTHO05D003803 7.2e-10 68.6 46 60.9
TAR381G0455 Trochodendron aralioides HOM05D001304 ORTHO05D003803 7.2e-10 68.6 46 63.0
vmacro05523 Vaccinium macrocarpon HOM05D001304 ORTHO05D003803 7.2e-10 68.6 46 60.9
SMO353G0212 Selaginella moellendorffii HOM05D001304 ORTHO05D003803 9.4e-10 68.2 46 63.0
Aa31LG1G16440 Aethionema arabicum HOM05D001304 ORTHO05D003803 1.2e-09 67.8 39 71.8
ATR0800G081 Amborella trichopoda HOM05D001304 ORTHO05D003803 1.2e-09 67.8 46 63.0
Manes.12G121600 Manihot esculenta HOM05D001304 ORTHO05D003803 1.2e-09 67.8 43 67.4
Cfa010111 Carpinus fangiana HOM05D001304 ORTHO05D003803 1.6e-09 67.4 46 67.4
CSS0036027 Camellia sinensis var. sinensis HOM05D001304 ORTHO05D003803 2.1e-09 67.0 46 60.9
CBR_g51495 Chara braunii HOM05D001304 ORTHO05D003803 2.7e-09 66.6 46 54.3
ECA246G4544 Erigeron canadensis HOM05D001304 ORTHO05D003803 2.7e-09 66.6 46 60.9
Eucgr.I00597 Eucalyptus grandis HOM05D001304 ORTHO05D003803 2.7e-09 66.6 43 69.8
TAR625G1042 Trochodendron aralioides HOM05D001304 ORTHO05D003803 2.7e-09 66.6 46 63.0
C02p04530 Brassica napus HOM05D001304 ORTHO05D003803 3.6e-09 66.2 41 68.3
BolC2t06413H Brassica oleracea HOM05D001304 ORTHO05D003803 3.6e-09 66.2 41 68.3
AagrBONN_evm.TU.Sc2ySwM_117.3512 Anthoceros agrestis HOM05D001304 ORTHO05D003803 4.6e-09 65.9 46 60.9
Ah.03g134350 Amaranthus hybridus HOM05D001304 ORTHO05D003803 7.9e-09 65.1 46 58.7
MBI16_g33083_MAGBIO Magnolia biondii HOM05D001304 ORTHO05D003803 1.0e-08 64.7 46 63.0
QL11p013027 Quercus lobata HOM05D001304 ORTHO05D003803 1.1e-07 61.2 58 53.4
Sc12g0003840 Simmondsia chinensis HOM05D001304 ORTHO05D003803 1.1e-07 61.2 46 54.3
SalBow3G1603 Salvia bowleyana HOM05D001304 ORTHO05D003803 2.6e-07 60.1 43 58.1
Cre13.g572900 Chlamydomonas reinhardtii HOM05D001304 ORTHO05D003803 5.7e-07 58.9 46 52.2
RcHm_v2.0_Chr7g0233391 Rosa chinensis HOM05D001304 ORTHO05D003803 1.3e-06 57.8 68 44.1
Oeu026995.1 Olea europaea HOM05D001304 ORTHO05D003803 6.3e-06 55.5 34 61.8


User provided reference genes

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