Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19902 Sequoiadendron giganteum HOM05D005787 ORTHO05D007011 1.3e-137 493.0 239 100.0
Atru.chr10.2171 Acer truncatum HOM05D005787 ORTHO05D007011 3.1e-67 259.2 157 74.5
MBI02_g15259_MAGBIO Magnolia biondii HOM05D005787 ORTHO05D007011 4.0e-67 258.8 158 74.7
GSVIVG01012651001 Vitis vinifera HOM05D005787 ORTHO05D007011 2.9e-65 252.7 157 73.2
Nn1g07089 Nelumbo nucifera HOM05D005787 ORTHO05D007011 6.4e-65 251.5 160 72.5
Sabra04G0010700 Salix brachista HOM05D005787 ORTHO05D007011 8.3e-65 251.1 163 71.2
vmacro15819 Vaccinium macrocarpon HOM05D005787 ORTHO05D007011 1.1e-64 250.8 177 66.1
Potri.004G019100 Populus trichocarpa HOM05D005787 ORTHO05D007011 3.2e-64 249.2 157 72.0
CiPaw.09G089100 Carya illinoinensis HOM05D005787 ORTHO05D007011 5.4e-64 248.4 172 66.3
Haze_06771 Corylus avellana HOM05D005787 ORTHO05D007011 5.4e-64 248.4 159 69.2
Thecc.06G217000 Theobroma cacao HOM05D005787 ORTHO05D007011 9.2e-64 247.7 157 70.7
Eucgr.E04102 Eucalyptus grandis HOM05D005787 ORTHO05D007011 1.6e-63 246.9 164 70.7
Prupe.4G024200 Prunus persica HOM05D005787 ORTHO05D007011 1.6e-63 246.9 169 65.7
Dinv20032 Davidia involucrata HOM05D005787 ORTHO05D007011 3.5e-63 245.7 160 70.0
Rhsim02G0110900 Rhododendron simsii HOM05D005787 ORTHO05D007011 3.5e-63 245.7 157 70.7
DCAR_029795 Daucus carota HOM05D005787 ORTHO05D007011 7.8e-63 244.6 172 64.0
Manes.16G010400 Manihot esculenta HOM05D005787 ORTHO05D007011 7.8e-63 244.6 160 70.0
THA.LOC104812988 Tarenaya hassleriana HOM05D005787 ORTHO05D007011 7.8e-63 244.6 169 66.9
Lj1C1227T21 Lonicera japonica HOM05D005787 ORTHO05D007011 1.0e-62 244.2 159 70.4
MD10G1317600 Malus domestica HOM05D005787 ORTHO05D007011 1.0e-62 244.2 158 69.0
PGR042G0837 Punica granatum HOM05D005787 ORTHO05D007011 1.0e-62 244.2 157 69.4
QL05p074231 Quercus lobata HOM05D005787 ORTHO05D007011 1.3e-62 243.8 157 70.1
TAR624G0905 Trochodendron aralioides HOM05D005787 ORTHO05D007011 1.3e-62 243.8 159 71.1
Gohir.D05G171800 Gossypium hirsutum HOM05D005787 ORTHO05D007011 1.7e-62 243.4 157 70.1
Gorai.009G176900 Gossypium raimondii HOM05D005787 ORTHO05D007011 1.7e-62 243.4 157 70.1
MD10G1317000 Malus domestica HOM05D005787 ORTHO05D007011 1.7e-62 243.4 166 66.3
Psat1g182520 Pisum sativum HOM05D005787 ORTHO05D007011 2.3e-62 243.0 160 68.8
A01p13100 Brassica napus HOM05D005787 ORTHO05D007011 3.9e-62 242.3 162 67.9
C01p15790 Brassica napus HOM05D005787 ORTHO05D007011 3.9e-62 242.3 162 67.9
BolC1t01532H Brassica oleracea HOM05D005787 ORTHO05D007011 3.9e-62 242.3 162 67.9
Ciclev10015055m.g Citrus clementina HOM05D005787 ORTHO05D007011 5.0e-62 241.9 157 70.7
Gohir.A05G168600 Gossypium hirsutum HOM05D005787 ORTHO05D007011 5.0e-62 241.9 157 70.1
Sc05g0009040 Simmondsia chinensis HOM05D005787 ORTHO05D007011 5.0e-62 241.9 157 73.2
Cpa.g.sc198.22 Carica papaya HOM05D005787 ORTHO05D007011 6.6e-62 241.5 155 71.0
ClCG03G004890 Citrullus lanatus HOM05D005787 ORTHO05D007011 8.6e-62 241.1 157 71.3
BcaC09g51204 Brassica carinata HOM05D005787 ORTHO05D007011 1.1e-61 240.7 157 70.1
BraA01t01253Z Brassica rapa HOM05D005787 ORTHO05D007011 1.5e-61 240.4 162 67.3
CSS0044707 Camellia sinensis var. sinensis HOM05D005787 ORTHO05D007011 1.5e-61 240.4 157 68.8
CSS0006555 Camellia sinensis var. sinensis HOM05D005787 ORTHO05D007011 1.9e-61 240.0 157 68.2
CsaV3_1G010950 Cucumis sativus L. HOM05D005787 ORTHO05D007011 1.9e-61 240.0 157 70.1
Cc09_g01960 Coffea canephora HOM05D005787 ORTHO05D007011 2.5e-61 239.6 162 66.0
PSO541G2671 Papaver somniferum HOM05D005787 ORTHO05D007011 3.3e-61 239.2 157 68.8
BcaNung02245 Brassica carinata HOM05D005787 ORTHO05D007011 4.3e-61 238.8 162 67.3
CANSAT56G2549 Cannabis sativa HOM05D005787 ORTHO05D007011 4.3e-61 238.8 160 68.1
Lsat_1_v5_gn_1_122000 Lactuca sativa HOM05D005787 ORTHO05D007011 4.3e-61 238.8 176 65.9
Ca_00626_v3 Cicer arietinum L. HOM05D005787 ORTHO05D007011 5.6e-61 238.4 160 66.2
Lalb_Chr18g0056211 Lupinus albus HOM05D005787 ORTHO05D007011 7.3e-61 238.0 160 68.1
Sp7g19940 Schrenkiella parvula HOM05D005787 ORTHO05D007011 7.3e-61 238.0 157 69.4
VMungo0540G0861 Vigna mungo HOM05D005787 ORTHO05D007011 9.5e-61 237.7 160 65.6
FvH4_3g02480 Fragaria vesca HOM05D005787 ORTHO05D007011 1.2e-60 237.3 173 64.2
ATR0752G095 Amborella trichopoda HOM05D005787 ORTHO05D007011 2.1e-60 236.5 161 68.9
Glyma.13G206600 Glycine max HOM05D005787 ORTHO05D007011 2.1e-60 236.5 160 66.2
Oeu015733.1 Olea europaea HOM05D005787 ORTHO05D007011 2.1e-60 236.5 157 67.5
TPR.G33224 Trifolium pratense HOM05D005787 ORTHO05D007011 2.1e-60 236.5 160 68.1
Actinidia11846 Actinidia chinensis HOM05D005787 ORTHO05D007011 3.6e-60 235.7 157 66.9
Sed0015393 Sechium edule HOM05D005787 ORTHO05D007011 3.6e-60 235.7 157 68.8
Aa31LG6G3750 Aethionema arabicum HOM05D005787 ORTHO05D007011 4.7e-60 235.3 158 68.4
Peaxi162Scf00262g00038 Petunia axillaris HOM05D005787 ORTHO05D007011 4.7e-60 235.3 162 65.4
Psat0s341g0040 Pisum sativum HOM05D005787 ORTHO05D007011 4.7e-60 235.3 160 66.9
SalBow1G7047 Salvia bowleyana HOM05D005787 ORTHO05D007011 4.7e-60 235.3 161 66.5
Lsat_1_v5_gn_1_128660 Lactuca sativa HOM05D005787 ORTHO05D007011 8.1e-60 234.6 179 64.8
Solyc02g080320.4 Solanum lycopersicum HOM05D005787 ORTHO05D007011 8.1e-60 234.6 162 64.8
FAN25G2524 Fragaria x ananassa HOM05D005787 ORTHO05D007011 1.1e-59 234.2 173 63.0
HanXRQChr05g0138101 Helianthus annuus HOM05D005787 ORTHO05D007011 1.1e-59 234.2 158 69.6
Lj6g0025395 Lotus japonicus HOM05D005787 ORTHO05D007011 1.1e-59 234.2 167 65.3
Sopen02g025020 Solanum pennellii HOM05D005787 ORTHO05D007011 1.1e-59 234.2 162 64.2
CAN.G569.24 Capsicum annuum HOM05D005787 ORTHO05D007011 1.4e-59 233.8 154 67.5
CARHR228510 Cardamine hirsuta HOM05D005787 ORTHO05D007011 1.4e-59 233.8 157 68.8
Medtr7g113450 Medicago truncatula HOM05D005787 ORTHO05D007011 1.4e-59 233.8 161 67.1
Phvul.006G151200 Phaseolus vulgaris HOM05D005787 ORTHO05D007011 1.4e-59 233.8 160 64.4
arahy.Tifrunner.gnm1.ann1.J4BAYR Arachis hypogaea HOM05D005787 ORTHO05D007011 1.8e-59 233.4 158 66.5
arahy.Tifrunner.gnm1.ann1.N0U7LY Arachis hypogaea HOM05D005787 ORTHO05D007011 1.8e-59 233.4 158 66.5
Nitab4.5_0003893g0010 Nicotiana tabacum HOM05D005787 ORTHO05D007011 2.3e-59 233.0 166 63.9
AL7G32160 Arabidopsis lyrata HOM05D005787 ORTHO05D007011 3.1e-59 232.6 158 67.7
Thhalv10025093m.g Eutrema salsugineum HOM05D005787 ORTHO05D007011 3.1e-59 232.6 155 69.0
Glyma.15G106100 Glycine max HOM05D005787 ORTHO05D007011 3.1e-59 232.6 160 65.0
CDE11G0095 Ceratophyllum demersum HOM05D005787 ORTHO05D007011 4.0e-59 232.3 155 68.4
PGSC0003DMG400002087 Solanum tuberosum HOM05D005787 ORTHO05D007011 4.0e-59 232.3 162 64.2
Lj6g0006260 Lotus japonicus HOM05D005787 ORTHO05D007011 5.2e-59 231.9 158 67.1
EL10Ac8g20016 Beta vulgaris HOM05D005787 ORTHO05D007011 6.8e-59 231.5 157 66.2
CANSAT64G1034 Cannabis sativa HOM05D005787 ORTHO05D007011 6.8e-59 231.5 158 66.5
HanXRQChr01g0003621 Helianthus annuus HOM05D005787 ORTHO05D007011 8.9e-59 231.1 162 64.2
TPR.G7642 Trifolium pratense HOM05D005787 ORTHO05D007011 8.9e-59 231.1 158 65.8
MELO3C002471.2 Cucumis melo HOM05D005787 ORTHO05D007011 2.0e-58 229.9 157 68.8
Medtr2g022770 Medicago truncatula HOM05D005787 ORTHO05D007011 2.0e-58 229.9 160 65.0
RcHm_v2.0_Chr5g0003731 Rosa chinensis HOM05D005787 ORTHO05D007011 2.0e-58 229.9 157 67.5
Aqoxy1G03304 Aquilegia oxysepala HOM05D005787 ORTHO05D007011 4.4e-58 228.8 164 65.2
CsaV3_1G010930 Cucumis sativus L. HOM05D005787 ORTHO05D007011 4.4e-58 228.8 157 68.8
AT4G21770 Arabidopsis thaliana HOM05D005787 ORTHO05D007011 7.5e-58 228.0 158 67.1
Lalb_Chr18g0056221 Lupinus albus HOM05D005787 ORTHO05D007011 7.5e-58 228.0 160 65.6
CiPaw.10G069200 Carya illinoinensis HOM05D005787 ORTHO05D007011 4.9e-57 225.3 157 63.7
Migut.H01558 Erythranthe guttata HOM05D005787 ORTHO05D007011 4.9e-57 225.3 158 67.1
AUR62012669 Chenopodium quinoa HOM05D005787 ORTHO05D007011 1.1e-56 224.2 172 60.5
AUR62021984 Chenopodium quinoa HOM05D005787 ORTHO05D007011 1.1e-56 224.2 163 63.8
Ah.09g235150 Amaranthus hybridus HOM05D005787 ORTHO05D007011 1.4e-56 223.8 163 62.6
Hund21388 Selenicereus undatus HOM05D005787 ORTHO05D007011 1.9e-56 223.4 156 66.7
AUR62021985 Chenopodium quinoa HOM05D005787 ORTHO05D007011 2.4e-56 223.0 171 61.4
ECA248G2950 Erigeron canadensis HOM05D005787 ORTHO05D007011 7.1e-56 221.5 155 67.1
EL10Ac8g20017 Beta vulgaris HOM05D005787 ORTHO05D007011 9.2e-56 221.1 157 65.6
Zm00001eb110780 Zea mays HOM05D005787 ORTHO05D007011 1.2e-55 220.7 163 63.2
Ah.09g235140 Amaranthus hybridus HOM05D005787 ORTHO05D007011 1.6e-55 220.3 157 66.9
RcHm_v2.0_Chr5g0003761 Rosa chinensis HOM05D005787 ORTHO05D007011 1.6e-55 220.3 172 60.5
Hund21387 Selenicereus undatus HOM05D005787 ORTHO05D007011 7.8e-55 218.0 160 63.1
Carub.0007s1963 Capsella rubella HOM05D005787 ORTHO05D007011 1.0e-54 217.6 151 66.2
SGA_v2.0_scaffold89G27454 Striga asiatica HOM05D005787 ORTHO05D007011 5.1e-54 215.3 167 62.9
AUR62012670 Chenopodium quinoa HOM05D005787 ORTHO05D007011 6.6e-54 214.9 161 62.7
AagrBONN_evm.TU.Sc2ySwM_228.3336 Anthoceros agrestis HOM05D005787 ORTHO05D007011 3.6e-52 209.1 155 61.9
Pp3c5_11180 Physcomitrium patens HOM05D005787 ORTHO05D007011 8.1e-52 208.0 156 64.7
Mapoly0146s0040 Marchantia polymorpha HOM05D005787 ORTHO05D007011 1.3e-49 200.7 155 58.1
Mapoly0067s0098 Marchantia polymorpha HOM05D005787 ORTHO05D007011 1.0e-46 191.0 157 60.5
MELO3C002473.2 Cucumis melo HOM05D005787 ORTHO05D007011 2.8e-44 183.0 116 74.1
SMO200G0166 Selaginella moellendorffii HOM05D005787 ORTHO05D007011 1.5e-42 177.2 154 55.8
unitig_0.g957 Utricularia gibba HOM05D005787 ORTHO05D007011 1.5e-42 177.2 114 70.2
DCAR_024937 Daucus carota HOM05D005787 ORTHO05D007011 4.4e-42 175.6 118 70.3
SMO200G0270 Selaginella moellendorffii HOM05D005787 ORTHO05D007011 1.9e-40 170.2 175 49.1
HPP92_013307 Vanilla planifolia HOM05D005787 ORTHO05D007011 5.4e-40 168.7 114 64.9
ECA248G3226 Erigeron canadensis HOM05D005787 ORTHO05D007011 4.8e-28 129.0 178 42.1
BcaC05g26802 Brassica carinata HOM05D005787 ORTHO05D007011 5.8e-26 122.1 87 65.5
Aqoxy92s001 Aquilegia oxysepala HOM05D005787 ORTHO05D007011 1.9e-21 107.1 165 38.8
Cre11.g474850 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 5.3e-11 72.4 145 33.8
MCO11G946 Micromonas commoda HOM05D005787 ORTHO05D007011 5.3e-11 72.4 143 29.4
QL05p074297 Quercus lobata HOM05D000001 ORTHO05D007011 2.7e-07 60.1 56 44.6
PRCOL_00006623 Prasinoderma coloniale HOM05D005787 ORTHO05D007011 6.1e-07 58.9 151 31.8
Os07g0660400 Oryza sativa ssp. japonica HOM05D005787 ORTHO05D007011 2.3e-06 57.0 43 60.5


User provided reference genes

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