Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19864 Sequoiadendron giganteum HOM05D002338 ORTHO05D006706 3.9e-72 274.6 131 100.0
Nn2g14191 Nelumbo nucifera HOM05D002338 ORTHO05D006706 1.8e-61 239.2 129 84.5
Lalb_Chr24g0393531 Lupinus albus HOM05D002338 ORTHO05D006706 5.2e-61 237.7 129 84.5
CiPaw.13G135000 Carya illinoinensis HOM05D002338 ORTHO05D006706 1.5e-60 236.1 129 83.7
SalBow3G4661 Salvia bowleyana HOM05D002338 ORTHO05D006706 2.6e-60 235.3 130 83.1
Aqoxy2G01110 Aquilegia oxysepala HOM05D002338 ORTHO05D006706 5.8e-60 234.2 129 85.3
CANSAT54G2275 Cannabis sativa HOM05D002338 ORTHO05D006706 5.8e-60 234.2 129 83.7
Haze_23365 Corylus avellana HOM05D002338 ORTHO05D006706 7.5e-60 233.8 129 82.2
HanXRQChr01g0024511 Helianthus annuus HOM05D002338 ORTHO05D006706 7.5e-60 233.8 128 85.2
CSS0045463 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006706 1.7e-59 232.6 129 81.4
FAN21G3331 Fragaria x ananassa HOM05D002338 ORTHO05D006706 2.2e-59 232.3 129 81.4
vmacro14352 Vaccinium macrocarpon HOM05D002338 ORTHO05D006706 2.2e-59 232.3 128 82.0
Cfa010006 Carpinus fangiana HOM05D002338 ORTHO05D006706 3.7e-59 231.5 129 81.4
Glyma.08G074700 Glycine max HOM05D000446 ORTHO05D006706 3.7e-59 231.5 127 83.5
Oeu002370.1 Olea europaea HOM05D002338 ORTHO05D006706 3.7e-59 231.5 130 80.0
Psat1g178360 Pisum sativum HOM05D002338 ORTHO05D006706 3.7e-59 231.5 129 81.4
TAR633G2567 Trochodendron aralioides HOM05D002338 ORTHO05D006706 3.7e-59 231.5 130 80.8
FAN11G3385 Fragaria x ananassa HOM05D002338 ORTHO05D006706 4.9e-59 231.1 129 80.6
Lsat_1_v5_gn_1_59241 Lactuca sativa HOM05D002338 ORTHO05D006706 4.9e-59 231.1 129 79.8
Phvul.005G123100 Phaseolus vulgaris HOM05D002338 ORTHO05D006706 4.9e-59 231.1 129 81.4
CiPaw.14G099400 Carya illinoinensis HOM05D002338 ORTHO05D006706 8.3e-59 230.3 129 82.2
Manes.04G002800 Manihot esculenta HOM05D002338 ORTHO05D006706 8.3e-59 230.3 128 82.8
QL01p012128 Quercus lobata HOM05D002338 ORTHO05D006706 8.3e-59 230.3 129 81.4
RcHm_v2.0_Chr5g0045651 Rosa chinensis HOM05D002338 ORTHO05D006706 8.3e-59 230.3 129 79.8
Glyma.12G185700 Glycine max HOM05D002338 ORTHO05D006706 1.1e-58 229.9 129 80.6
Sp4g10240 Schrenkiella parvula HOM05D002338 ORTHO05D006706 1.1e-58 229.9 128 81.2
SGA_v2.0_scaffold295G47518 Striga asiatica HOM05D002338 ORTHO05D006706 1.1e-58 229.9 130 80.0
A04p20960 Brassica napus HOM05D002338 ORTHO05D006706 1.4e-58 229.6 128 81.2
BraA04t17665Z Brassica rapa HOM05D002338 ORTHO05D006706 1.4e-58 229.6 128 81.2
C04p56750 Brassica napus HOM05D002338 ORTHO05D006706 1.9e-58 229.2 128 80.5
BolC4t27207H Brassica oleracea HOM05D002338 ORTHO05D006706 1.9e-58 229.2 128 80.5
Thhalv10017003m.g Eutrema salsugineum HOM05D002338 ORTHO05D006706 1.9e-58 229.2 128 80.5
Atru.chr3.3215 Acer truncatum HOM05D002338 ORTHO05D006706 2.4e-58 228.8 129 80.6
Migut.N02484 Erythranthe guttata HOM05D002338 ORTHO05D006706 2.4e-58 228.8 130 80.0
Glyma.13G315800 Glycine max HOM05D002338 ORTHO05D006706 2.4e-58 228.8 129 80.6
Hma1.2p1_0587F.1_g184230 Hydrangea macrophylla HOM05D002338 ORTHO05D006706 2.4e-58 228.8 129 79.8
Potri.004G201400 Populus trichocarpa HOM05D002338 ORTHO05D006706 2.4e-58 228.8 129 80.6
VMungo1080G1495 Vigna mungo HOM05D002338 ORTHO05D006706 2.4e-58 228.8 129 79.8
Rhsim01G0204800 Rhododendron simsii HOM05D002338 ORTHO05D006706 3.2e-58 228.4 129 79.8
TWI79G1300 Tripterygium wilfordii HOM05D002338 ORTHO05D006706 3.2e-58 228.4 129 79.8
Lj3g0018005 Lotus japonicus HOM05D002338 ORTHO05D006706 4.1e-58 228.0 129 80.6
Hund18762 Selenicereus undatus HOM05D002338 ORTHO05D006706 4.1e-58 228.0 129 81.4
Ca_01654_v3 Cicer arietinum L. HOM05D002338 ORTHO05D006706 7.1e-58 227.3 129 79.8
Ciclev10028933m.g Citrus clementina HOM05D002338 ORTHO05D006706 9.2e-58 226.9 129 79.1
ECA248G0812 Erigeron canadensis HOM05D002338 ORTHO05D006706 9.2e-58 226.9 128 82.0
Sed0026919 Sechium edule HOM05D002338 ORTHO05D006706 9.2e-58 226.9 129 79.8
Sc21g0007050 Simmondsia chinensis HOM05D002338 ORTHO05D006706 9.2e-58 226.9 127 82.7
THA.LOC104800525 Tarenaya hassleriana HOM05D002338 ORTHO05D006706 9.2e-58 226.9 128 81.2
Carub.0004s0807 Capsella rubella HOM05D002338 ORTHO05D006706 1.2e-57 226.5 128 80.5
arahy.Tifrunner.gnm1.ann1.2YH6BX Arachis hypogaea HOM05D002338 ORTHO05D006706 1.6e-57 226.1 129 79.8
MD03G1147500 Malus domestica HOM05D002338 ORTHO05D006706 1.6e-57 226.1 129 78.3
MD11G1166200 Malus domestica HOM05D002338 ORTHO05D006706 1.6e-57 226.1 129 78.3
ATR0820G136 Amborella trichopoda HOM05D002338 ORTHO05D006706 2.1e-57 225.7 129 79.1
AT2G27450 Arabidopsis thaliana HOM05D002338 ORTHO05D006706 2.1e-57 225.7 128 79.7
Eucgr.J00500 Eucalyptus grandis HOM05D002338 ORTHO05D006706 2.1e-57 225.7 129 79.8
Sabra04G0136100 Salix brachista HOM05D002338 ORTHO05D006706 2.1e-57 225.7 129 79.1
Prupe.6G132000 Prunus persica HOM05D002338 ORTHO05D006706 2.7e-57 225.3 129 78.3
Duzib150G1080 Durio zibethinus HOM05D002338 ORTHO05D006706 3.5e-57 224.9 128 80.5
Psat5g258120 Pisum sativum HOM05D002338 ORTHO05D006706 3.5e-57 224.9 129 79.1
AUR62009748 Chenopodium quinoa HOM05D002338 ORTHO05D006706 4.6e-57 224.6 129 79.8
Dinv22835 Davidia involucrata HOM05D002338 ORTHO05D006706 4.6e-57 224.6 129 78.3
THA.LOC104826428 Tarenaya hassleriana HOM05D002338 ORTHO05D006706 4.6e-57 224.6 128 78.9
GSVIVG01036111001 Vitis vinifera HOM05D002338 ORTHO05D006706 4.6e-57 224.6 128 79.7
AUR62036197 Chenopodium quinoa HOM05D002338 ORTHO05D006706 6.0e-57 224.2 129 79.8
Gohir.A09G096100 Gossypium hirsutum HOM05D002338 ORTHO05D006706 6.0e-57 224.2 128 80.5
Gohir.D09G095800 Gossypium hirsutum HOM05D002338 ORTHO05D006706 6.0e-57 224.2 128 80.5
Gorai.006G112500 Gossypium raimondii HOM05D002338 ORTHO05D006706 6.0e-57 224.2 128 80.5
Solyc11g068540.2 Solanum lycopersicum HOM05D002338 ORTHO05D006706 6.0e-57 224.2 129 76.7
Sopen11g027260 Solanum pennellii HOM05D002338 ORTHO05D006706 6.0e-57 224.2 129 76.7
PGSC0003DMG400026336 Solanum tuberosum HOM05D002338 ORTHO05D006706 6.0e-57 224.2 129 76.7
TPR.G4472 Trifolium pratense HOM05D002338 ORTHO05D006706 6.0e-57 224.2 129 79.1
AL4G21410 Arabidopsis lyrata HOM05D002338 ORTHO05D006706 7.8e-57 223.8 128 78.1
EL10Ac7g15831 Beta vulgaris HOM05D002338 ORTHO05D006706 7.8e-57 223.8 129 79.1
Peaxi162Scf00040g00113 Petunia axillaris HOM05D002338 ORTHO05D006706 1.0e-56 223.4 129 77.5
CAN.G1524.8 Capsicum annuum HOM05D002338 ORTHO05D006706 1.3e-56 223.0 127 78.0
Cc01_g08990 Coffea canephora HOM05D002338 ORTHO05D006706 1.3e-56 223.0 129 77.5
Thecc.09G281400 Theobroma cacao HOM05D002338 ORTHO05D006706 1.3e-56 223.0 128 81.2
unitig_0.g555 Utricularia gibba HOM05D002338 ORTHO05D006706 1.3e-56 223.0 129 79.1
CARHR120040 Cardamine hirsuta HOM05D002338 ORTHO05D006706 1.7e-56 222.6 127 79.5
Nitab4.5_0000755g0010 Nicotiana tabacum HOM05D002338 ORTHO05D006706 1.7e-56 222.6 129 78.3
Ah.08g215660 Amaranthus hybridus HOM05D002338 ORTHO05D006706 2.3e-56 222.2 129 78.3
Lj2A965T21 Lonicera japonica HOM05D002338 ORTHO05D006706 3.0e-56 221.9 128 78.9
Os02g0533900 Oryza sativa ssp. japonica HOM05D002338 ORTHO05D006706 3.0e-56 221.9 127 79.5
FAN25G3385 Fragaria x ananassa HOM05D002338 ORTHO05D006706 3.9e-56 221.5 125 79.2
Medtr2g086600 Medicago truncatula HOM05D002338 ORTHO05D006706 6.6e-56 220.7 129 77.5
PGR119G2253 Punica granatum HOM05D002338 ORTHO05D006706 6.6e-56 220.7 128 78.1
Nitab4.5_0006738g0010 Nicotiana tabacum HOM05D002338 ORTHO05D006706 8.6e-56 220.3 129 76.7
MSTRG.17703 Avicennia marina HOM05D002338 ORTHO05D006706 2.5e-55 218.8 130 76.2
DCAR_010340 Daucus carota HOM05D002338 ORTHO05D006706 3.3e-55 218.4 129 78.3
RcHm_v2.0_Chr5g0046351 Rosa chinensis HOM05D002338 ORTHO05D006706 5.6e-55 217.6 121 80.2
Pp3c18_8260 Physcomitrium patens HOM05D002338 ORTHO05D006706 7.3e-55 217.2 127 78.0
Aa31LG5G8780 Aethionema arabicum HOM05D002338 ORTHO05D006706 9.5e-55 216.9 121 81.0
FvH4_3g25110 Fragaria vesca HOM05D002338 ORTHO05D006706 9.5e-55 216.9 122 79.5
PSO339G0254 Papaver somniferum HOM05D002338 ORTHO05D006706 9.5e-55 216.9 127 78.0
MSTRG.12373 Avicennia marina HOM05D002338 ORTHO05D006706 1.6e-54 216.1 129 73.6
PSO801G0423 Papaver somniferum HOM05D002338 ORTHO05D006706 1.6e-54 216.1 127 78.0
SMO331G0008 Selaginella moellendorffii HOM05D002338 ORTHO05D006706 1.6e-54 216.1 127 76.4
Mapoly0103s0045 Marchantia polymorpha HOM05D002338 ORTHO05D006706 1.1e-53 213.4 131 73.3
Cpa.g.sc195.1 Carica papaya HOM05D002338 ORTHO05D006706 2.3e-53 212.2 123 77.2
CDE08G1107 Ceratophyllum demersum HOM05D002338 ORTHO05D006706 2.3e-53 212.2 127 75.6
AagrBONN_evm.TU.Sc2ySwM_362.1450 Anthoceros agrestis HOM05D002338 ORTHO05D006706 5.2e-53 211.1 130 72.3
SHI12384 Sapria himalayana HOM05D002338 ORTHO05D006706 5.2e-53 211.1 130 75.4
Oeu035434.1 Olea europaea HOM05D002338 ORTHO05D006706 9.9e-52 206.8 121 77.7
CBR_g2849 Chara braunii HOM05D002338 ORTHO05D000013 3.2e-50 201.8 127 71.7
arahy.Tifrunner.gnm1.ann1.65JLCH Arachis hypogaea HOM05D002338 ORTHO05D006706 9.2e-50 200.3 131 71.8
ClCG01G012180 Citrullus lanatus HOM05D002338 ORTHO05D006706 1.2e-49 199.9 188 55.3
arahy.Tifrunner.gnm1.ann1.EN3ZRJ Arachis hypogaea HOM05D002338 ORTHO05D006706 7.8e-49 197.2 129 72.1
CSS0028747 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006706 1.7e-48 196.1 120 75.0
arahy.Tifrunner.gnm1.ann1.R0HYNC Arachis hypogaea HOM05D002338 ORTHO05D006706 2.1e-46 189.1 112 76.8
CsaV3_1G015920 Cucumis sativus L. HOM05D002338 ORTHO05D006706 1.1e-45 186.8 111 77.5
Potri.009G162600 Populus trichocarpa HOM05D002338 ORTHO05D006706 7.6e-44 180.6 129 67.4
Actinidia37079 Actinidia chinensis HOM05D002338 ORTHO05D006706 1.3e-43 179.9 105 77.1
TWI75G0919 Tripterygium wilfordii HOM05D002338 ORTHO05D006706 2.1e-38 162.5 111 67.6
CsaV3_1G015010 Cucumis sativus L. HOM05D002338 ORTHO05D006706 6.2e-38 161.0 91 82.4
MELO3C027387.2 Cucumis melo HOM05D002338 ORTHO05D006706 4.2e-34 148.3 85 77.6
Cre12.g535750 Chlamydomonas reinhardtii HOM05D002338 ORTHO05D006706 1.3e-32 143.3 143 47.6
PRCOL_00003112 Prasinoderma coloniale HOM05D002338 ORTHO05D006706 3.0e-32 142.1 144 51.4
Cre01.g035300 Chlamydomonas reinhardtii HOM05D002338 ORTHO05D006706 3.9e-32 141.7 145 46.9
arahy.Tifrunner.gnm1.ann1.MKCD0D Arachis hypogaea HOM05D002338 ORTHO05D006706 5.6e-31 137.9 100 69.0
CSS0011924 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006706 4.5e-28 128.3 73 80.8
Zm00001eb242790 Zea mays HOM05D002338 ORTHO05D006706 1.1e-21 107.1 65 73.8
BcaC02g10875 Brassica carinata HOM05D002338 ORTHO05D006706 4.0e-21 105.1 67 73.1
Actinidia35467 Actinidia chinensis HOM05D002338 ORTHO05D006706 3.4e-20 102.1 54 85.2
C04p24150 Brassica napus HOM05D002338 ORTHO05D006706 1.0e-16 90.5 67 67.2
BolC4t23912H Brassica oleracea HOM05D002338 ORTHO05D006706 1.0e-16 90.5 67 67.2
CSS0045721 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 8.7e-16 87.4 98 49.0
MELO3C004683.2 Cucumis melo HOM05D002338 ORTHO05D006706 9.6e-15 84.0 46 82.6
Duzib170G1110 Durio zibethinus HOM05D002338 ORTHO05D006706 3.7e-14 82.0 42 88.1
arahy.Tifrunner.gnm1.ann1.AW3P0S Arachis hypogaea HOM05D002338 ORTHO05D006706 1.4e-13 80.1 58 69.0
A07p18210 Brassica napus HOM05D002338 ORTHO05D006706 1.4e-13 80.1 70 58.6
BraA07t29537Z Brassica rapa HOM05D002338 ORTHO05D006706 6.5e-11 71.2 67 55.2
Manes.11G162650 Manihot esculenta HOM05D002338 ORTHO05D006706 2.5e-10 69.3 82 48.8
Pp3s32_700 Physcomitrium patens HOM05D001787 ORTHO05D007379 2.8e-06 55.8 117 28.2
Nn8g38721 Nelumbo nucifera HOM05D001787 ORTHO05D003488 8.2e-06 54.3 118 30.5


User provided reference genes

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