Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 4.5e-58 227.6 109 100.0
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.9e-40 169.1 81 98.8
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 1.0e-33 146.7 81 80.2
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 2.5e-32 142.1 81 79.0
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 1.0e-30 136.7 84 75.0
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 1.8e-30 136.0 79 79.7
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 3.0e-30 135.2 79 77.2
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 3.0e-30 135.2 79 77.2
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 3.0e-30 135.2 79 75.9
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 6.8e-30 134.0 81 72.8
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 8.8e-30 133.7 79 75.9
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 8.8e-30 133.7 81 72.8
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 1.2e-29 133.3 81 72.8
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 1.2e-29 133.3 79 75.9
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 1.2e-29 133.3 79 75.9
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 1.2e-29 133.3 79 75.9
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 1.2e-29 133.3 79 75.9
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 1.2e-29 133.3 79 75.9
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 2.0e-29 132.5 79 75.9
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 2.0e-29 132.5 79 75.9
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 2.6e-29 132.1 79 75.9
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 2.6e-29 132.1 79 73.4
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 3.4e-29 131.7 81 71.6
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 3.4e-29 131.7 81 71.6
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 3.4e-29 131.7 81 71.6
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 3.4e-29 131.7 79 74.7
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 4.4e-29 131.3 79 74.7
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 4.4e-29 131.3 79 74.7
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 4.4e-29 131.3 81 71.6
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 4.4e-29 131.3 79 74.7
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 4.4e-29 131.3 79 73.4
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 5.7e-29 131.0 79 74.7
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 5.7e-29 131.0 79 74.7
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 5.7e-29 131.0 81 72.8
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 7.5e-29 130.6 79 74.7
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 7.5e-29 130.6 79 73.4
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 7.5e-29 130.6 81 71.6
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 7.5e-29 130.6 81 74.1
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 9.8e-29 130.2 79 72.2
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 1.3e-28 129.8 79 73.4
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 1.3e-28 129.8 79 72.2
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 1.3e-28 129.8 79 70.9
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 1.3e-28 129.8 79 73.4
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 1.3e-28 129.8 79 72.2
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 1.3e-28 129.8 79 72.2
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 1.3e-28 129.8 81 70.4
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 1.3e-28 129.8 79 73.4
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 1.7e-28 129.4 79 72.2
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 1.7e-28 129.4 79 72.2
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 2.2e-28 129.0 79 72.2
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 2.2e-28 129.0 81 71.6
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 2.8e-28 128.6 88 64.8
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 2.8e-28 128.6 81 70.4
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 3.7e-28 128.3 79 70.9
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 3.7e-28 128.3 79 73.4
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 3.7e-28 128.3 79 72.2
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 4.8e-28 127.9 79 72.2
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 4.8e-28 127.9 79 72.2
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 4.8e-28 127.9 79 72.2
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 4.8e-28 127.9 79 72.2
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 4.8e-28 127.9 79 72.2
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 4.8e-28 127.9 79 72.2
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 4.8e-28 127.9 79 70.9
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 6.3e-28 127.5 79 69.6
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 6.3e-28 127.5 79 72.2
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 6.3e-28 127.5 81 70.4
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 8.3e-28 127.1 79 72.2
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 8.3e-28 127.1 79 69.6
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 8.3e-28 127.1 79 70.9
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 8.3e-28 127.1 79 73.4
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 8.3e-28 127.1 79 70.9
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 1.1e-27 126.7 79 70.9
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 1.4e-27 126.3 79 70.9
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 1.8e-27 125.9 79 70.9
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 1.8e-27 125.9 79 70.9
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 2.4e-27 125.6 79 70.9
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 2.4e-27 125.6 81 67.9
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 2.4e-27 125.6 81 71.6
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 2.4e-27 125.6 79 70.9
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 2.4e-27 125.6 79 69.6
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 3.1e-27 125.2 79 70.9
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 4.1e-27 124.8 79 70.9
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 4.1e-27 124.8 79 70.9
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 4.1e-27 124.8 79 68.4
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 5.4e-27 124.4 79 67.1
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 5.4e-27 124.4 79 70.9
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 7.0e-27 124.0 79 70.9
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 7.0e-27 124.0 79 72.2
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 1.2e-26 123.2 79 68.4
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 1.2e-26 123.2 79 67.1
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 1.2e-26 123.2 79 67.1
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 1.6e-26 122.9 79 68.4
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 1.6e-26 122.9 79 67.1
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 1.6e-26 122.9 79 69.6
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 3.5e-26 121.7 79 69.6
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 4.5e-26 121.3 79 69.6
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 4.5e-26 121.3 79 65.8
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 5.9e-26 120.9 79 69.6
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 1.3e-25 119.8 79 68.4
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 1.3e-25 119.8 79 67.1
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 7.2e-24 114.0 106 53.8
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 1.6e-23 112.8 92 58.7
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 6.1e-23 110.9 80 65.0
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 5.2e-22 107.8 69 68.1
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 7.5e-21 104.0 65 69.2
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 1.1e-19 100.1 81 64.2
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 1.6e-18 96.3 80 55.0
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 2.0e-18 95.9 80 55.0
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 3.2e-11 72.0 49 65.3
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 3.2e-11 72.0 42 76.2
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 2.0e-10 69.3 42 71.4
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 1.2e-07 60.1 47 66.0
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 5.2e-06 54.7 34 64.7


User provided reference genes

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