Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19509 Sequoiadendron giganteum HOM05D004363 ORTHO05D005110 4.9e-51 204.1 101 100.0
SEGI_03324 Sequoiadendron giganteum HOM05D004363 ORTHO05D005110 2.5e-39 165.2 90 91.1
TAR169G0003 Trochodendron aralioides HOM05D004363 ORTHO05D005110 9.4e-26 120.2 85 70.6
TAR628G0010 Trochodendron aralioides HOM05D004363 ORTHO05D005110 1.6e-25 119.4 90 65.6
PGR004G0690 Punica granatum HOM05D004363 ORTHO05D005110 1.0e-24 116.7 86 64.0
Eucgr.A02575 Eucalyptus grandis HOM05D004363 ORTHO05D005110 1.4e-24 116.3 88 63.6
CAN.G911.40 Capsicum annuum HOM05D004363 ORTHO05D005110 1.8e-24 115.9 86 64.0
ECA233G0072 Erigeron canadensis HOM05D004363 ORTHO05D005110 2.3e-24 115.5 79 69.6
Cc06_g06670 Coffea canephora HOM05D004363 ORTHO05D005110 3.9e-24 114.8 86 62.8
Nn6g34649 Nelumbo nucifera HOM05D004363 ORTHO05D005110 3.9e-24 114.8 85 65.9
Haze_20158 Corylus avellana HOM05D004363 ORTHO05D005110 5.1e-24 114.4 86 65.1
Lsat_1_v5_gn_6_33820 Lactuca sativa HOM05D004363 ORTHO05D005110 5.1e-24 114.4 85 63.5
CANSAT64G2344 Cannabis sativa HOM05D004363 ORTHO05D005110 6.7e-24 114.0 84 67.9
Cfa020046 Carpinus fangiana HOM05D004363 ORTHO05D005110 6.7e-24 114.0 86 65.1
FvH4_6g20450 Fragaria vesca HOM05D004363 ORTHO05D005110 6.7e-24 114.0 86 62.8
FAN14G2782 Fragaria x ananassa HOM05D004363 ORTHO05D005110 6.7e-24 114.0 86 62.8
QL07p036386 Quercus lobata HOM05D004363 ORTHO05D005110 6.7e-24 114.0 86 66.3
RcHm_v2.0_Chr3g0476301 Rosa chinensis HOM05D004363 ORTHO05D005110 8.8e-24 113.6 86 62.8
Solyc01g006960.3 Solanum lycopersicum HOM05D004363 ORTHO05D005110 8.8e-24 113.6 86 62.8
Rhsim11G0045000 Rhododendron simsii HOM05D004363 ORTHO05D005110 1.1e-23 113.2 85 64.7
Sopen01g002950 Solanum pennellii HOM05D004363 ORTHO05D005110 1.1e-23 113.2 86 62.8
HanXRQChr02g0053261 Helianthus annuus HOM05D004363 ORTHO05D005110 1.5e-23 112.8 79 67.1
MD12G1041600 Malus domestica HOM05D004363 ORTHO05D005110 1.5e-23 112.8 86 64.0
Dinv12347 Davidia involucrata HOM05D004363 ORTHO05D005110 2.0e-23 112.5 88 61.4
FAN09G2042 Fragaria x ananassa HOM05D004363 ORTHO05D005110 2.0e-23 112.5 86 61.6
Gohir.A04G054750 Gossypium hirsutum HOM05D004363 ORTHO05D005110 2.5e-23 112.1 86 65.1
Oeu035643.1 Olea europaea HOM05D004363 ORTHO05D005110 2.5e-23 112.1 86 61.6
vmacro07483 Vaccinium macrocarpon HOM05D004363 ORTHO05D005110 2.5e-23 112.1 85 62.4
CSS0038425 Camellia sinensis var. sinensis HOM05D004363 ORTHO05D005110 3.3e-23 111.7 86 64.0
VMungo1383G2497 Vigna mungo HOM05D004363 ORTHO05D005110 3.3e-23 111.7 85 64.7
Aqoxy1G00638 Aquilegia oxysepala HOM05D004363 ORTHO05D005110 4.3e-23 111.3 90 61.1
Dinv31774 Davidia involucrata HOM05D004363 ORTHO05D005110 4.3e-23 111.3 86 62.8
Lj1g0000064 Lotus japonicus HOM05D004363 ORTHO05D005110 4.3e-23 111.3 85 64.7
MD14G1040700 Malus domestica HOM05D004363 ORTHO05D005110 4.3e-23 111.3 86 64.0
CiPaw.10G018600 Carya illinoinensis HOM05D004363 ORTHO05D005110 5.7e-23 110.9 86 61.6
Gorai.009G393900 Gossypium raimondii HOM05D004363 ORTHO05D005110 5.7e-23 110.9 86 64.0
PSO384G4461 Papaver somniferum HOM05D004363 ORTHO05D005110 5.7e-23 110.9 90 60.0
Potri.016G068800 Populus trichocarpa HOM05D004363 ORTHO05D005110 5.7e-23 110.9 84 64.3
Gohir.D04G091900 Gossypium hirsutum HOM05D004363 ORTHO05D005110 7.4e-23 110.5 86 64.0
Duzib093G0100 Durio zibethinus HOM05D004363 ORTHO05D005110 9.7e-23 110.2 84 64.3
Duzib128G0297 Durio zibethinus HOM05D004363 ORTHO05D005110 9.7e-23 110.2 85 63.5
Prupe.7G093600 Prunus persica HOM05D004363 ORTHO05D005110 9.7e-23 110.2 86 61.6
Sabra16G0069700 Salix brachista HOM05D004363 ORTHO05D005110 9.7e-23 110.2 86 62.8
CSS0037163 Camellia sinensis var. sinensis HOM05D004363 ORTHO05D005110 1.3e-22 109.8 85 63.5
FAN02G1528 Fragaria x ananassa HOM05D004363 ORTHO05D005110 1.3e-22 109.8 86 61.6
Lj1C1055T8 Lonicera japonica HOM05D004363 ORTHO05D005110 1.3e-22 109.8 86 59.3
PSO339G1158 Papaver somniferum HOM05D004363 ORTHO05D005110 1.3e-22 109.8 90 58.9
HPP92_013952 Vanilla planifolia HOM05D004363 ORTHO05D005110 1.7e-22 109.4 90 61.1
COL.COLO4_29546 Corchorus olitorius HOM05D004363 ORTHO05D005110 2.2e-22 109.0 85 64.7
Glyma.19G200400 Glycine max HOM05D004363 ORTHO05D005110 2.2e-22 109.0 86 62.8
MELO3C009547.2 Cucumis melo HOM05D004363 ORTHO05D005110 2.8e-22 108.6 85 61.2
Cpa.g.sc104.18 Carica papaya HOM05D004363 ORTHO05D005110 3.7e-22 108.2 86 62.8
ATR0772G191 Amborella trichopoda HOM05D004363 ORTHO05D005110 4.8e-22 107.8 90 57.8
Phvul.001G196200 Phaseolus vulgaris HOM05D004363 ORTHO05D005110 4.8e-22 107.8 79 65.8
TWI74G0412 Tripterygium wilfordii HOM05D004363 ORTHO05D005110 4.8e-22 107.8 87 60.9
arahy.Tifrunner.gnm1.ann1.D60SL5 Arachis hypogaea HOM05D004363 ORTHO05D005110 6.3e-22 107.5 86 60.5
arahy.Tifrunner.gnm1.ann1.KT4HPP Arachis hypogaea HOM05D004363 ORTHO05D005110 6.3e-22 107.5 86 60.5
Ca_09062_v3 Cicer arietinum L. HOM05D004363 ORTHO05D005110 6.3e-22 107.5 86 61.6
DCAR_020694 Daucus carota HOM05D004363 ORTHO05D005110 6.3e-22 107.5 86 58.1
CsaV3_3G038050 Cucumis sativus L. HOM05D004363 ORTHO05D005110 8.2e-22 107.1 85 60.0
Gohir.A11G315700 Gossypium hirsutum HOM05D004363 ORTHO05D005110 1.1e-21 106.7 85 61.2
Gohir.D11G332900 Gossypium hirsutum HOM05D004363 ORTHO05D005110 1.1e-21 106.7 85 61.2
Gorai.007G363900 Gossypium raimondii HOM05D004363 ORTHO05D005110 1.1e-21 106.7 85 61.2
Medtr7g106380 Medicago truncatula HOM05D004363 ORTHO05D005110 1.1e-21 106.7 86 60.5
THA.LOC104820934 Tarenaya hassleriana HOM05D004363 ORTHO05D005110 1.1e-21 106.7 85 63.5
Sed0002127 Sechium edule HOM05D004363 ORTHO05D005110 1.4e-21 106.3 85 61.2
ClCG10G018260 Citrullus lanatus HOM05D004363 ORTHO05D005110 2.4e-21 105.5 85 61.2
Glyma.03G202700 Glycine max HOM05D004363 ORTHO05D005110 2.4e-21 105.5 86 60.5
Psat0s3922g0040 Pisum sativum HOM05D004363 ORTHO05D005110 2.4e-21 105.5 86 58.1
AUR62041186 Chenopodium quinoa HOM05D004363 ORTHO05D005110 3.1e-21 105.1 84 58.3
Pp3c6_8810 Physcomitrium patens HOM05D004363 ORTHO05D005110 3.1e-21 105.1 90 54.4
SGA_v2.0_scaffold13G06653 Striga asiatica HOM05D004363 ORTHO05D005110 3.1e-21 105.1 84 63.1
TPR.G31289 Trifolium pratense HOM05D004363 ORTHO05D005110 3.1e-21 105.1 86 59.3
Carub.0006s1447 Capsella rubella HOM05D004363 ORTHO05D005110 5.3e-21 104.4 81 65.4
Sc01g0005470 Simmondsia chinensis HOM05D004363 ORTHO05D005110 5.3e-21 104.4 78 69.2
Aa31LG11G13340 Aethionema arabicum HOM05D004363 ORTHO05D005110 6.9e-21 104.0 81 64.2
CARHR197030 Cardamine hirsuta HOM05D004363 ORTHO05D005110 9.1e-21 103.6 81 64.2
AUR62030686 Chenopodium quinoa HOM05D004363 ORTHO05D005110 9.1e-21 103.6 84 57.1
TWI77G0878 Tripterygium wilfordii HOM05D004363 ORTHO05D005110 1.2e-20 103.2 87 60.9
Atru.chr8.1332 Acer truncatum HOM05D004363 ORTHO05D005110 1.5e-20 102.8 86 59.3
Migut.J00693 Erythranthe guttata HOM05D004363 ORTHO05D005110 1.5e-20 102.8 84 59.5
AL6G27170 Arabidopsis lyrata HOM05D004363 ORTHO05D005110 2.6e-20 102.1 81 64.2
AT5G16280 Arabidopsis thaliana HOM05D004363 ORTHO05D005110 2.6e-20 102.1 81 63.0
MSTRG.19302 Avicennia marina HOM05D004363 ORTHO05D005110 2.6e-20 102.1 78 62.8
Lalb_Chr25g0287961 Lupinus albus HOM05D004363 ORTHO05D005110 3.4e-20 101.7 90 54.4
Mapoly0053s0062 Marchantia polymorpha HOM05D004363 ORTHO05D005110 4.5e-20 101.3 85 55.3
CDE11G0453 Ceratophyllum demersum HOM05D004363 ORTHO05D005110 1.0e-19 100.1 79 60.8
BcaB01g04994 Brassica carinata HOM05D004363 ORTHO05D005110 1.7e-19 99.4 81 63.0
A10p22780 Brassica napus HOM05D004363 ORTHO05D005110 1.7e-19 99.4 81 63.0
BraA03t10093Z Brassica rapa HOM05D004363 ORTHO05D005110 1.7e-19 99.4 81 63.0
BraA10t44344Z Brassica rapa HOM05D004363 ORTHO05D005110 1.7e-19 99.4 81 63.0
Ciclev10010925m.g Citrus clementina HOM05D004363 ORTHO05D005110 1.7e-19 99.4 86 57.0
Lalb_Chr01g0017831 Lupinus albus HOM05D004363 ORTHO05D005110 1.7e-19 99.4 86 55.8
A03p07650 Brassica napus HOM05D004363 ORTHO05D005110 2.2e-19 99.0 81 63.0
Thhalv10012466m.g Eutrema salsugineum HOM05D004363 ORTHO05D005110 2.2e-19 99.0 81 61.7
MSTRG.5891 Avicennia marina HOM05D004363 ORTHO05D005110 3.8e-19 98.2 85 56.5
BcaNung06113 Brassica carinata HOM05D004363 ORTHO05D005110 3.8e-19 98.2 81 61.7
C09p60760 Brassica napus HOM05D004363 ORTHO05D005110 3.8e-19 98.2 81 61.7
BolC9t58910H Brassica oleracea HOM05D004363 ORTHO05D005110 3.8e-19 98.2 81 61.7
Zm00001eb060010 Zea mays HOM05D004363 ORTHO05D005110 3.8e-19 98.2 79 63.3
EL10Ac5g11738 Beta vulgaris HOM05D004363 ORTHO05D005110 5.0e-19 97.8 84 57.1
C03p08890 Brassica napus HOM05D004363 ORTHO05D005110 6.5e-19 97.4 81 61.7
BolC3t13384H Brassica oleracea HOM05D004363 ORTHO05D005110 6.5e-19 97.4 81 61.7
Sp6g27880 Schrenkiella parvula HOM05D004363 ORTHO05D005110 6.5e-19 97.4 81 61.7
GSVIVG01022591001 Vitis vinifera HOM05D004363 ORTHO05D005110 3.2e-18 95.1 66 69.7
AagrBONN_evm.TU.Sc2ySwM_228.1566 Anthoceros agrestis HOM05D004363 ORTHO05D005110 4.2e-18 94.7 89 49.4
unitig_578.g15812 Utricularia gibba HOM05D004363 ORTHO05D005110 7.9e-17 90.5 81 58.0
Os03g0786900 Oryza sativa ssp. japonica HOM05D004363 ORTHO05D005110 1.8e-16 89.4 64 67.2
SMO196G0050 Selaginella moellendorffii HOM05D004363 ORTHO05D005110 1.8e-16 89.4 66 62.1
SHI08951 Sapria himalayana HOM05D004363 ORTHO05D005110 6.3e-14 80.9 74 56.8
Actinidia03879 Actinidia chinensis HOM05D004363 ORTHO05D005110 1.1e-13 80.1 79 51.9
Ah.07g203630 Amaranthus hybridus HOM05D004363 ORTHO05D005110 1.7e-06 56.2 68 41.2
Manes.08G034300 Manihot esculenta HOM05D004363 ORTHO05D005110 1.7e-06 56.2 33 72.7
Hund10860 Selenicereus undatus HOM05D004363 ORTHO05D005110 4.8e-06 54.7 32 75.0


User provided reference genes

Program Settings