Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19277 Sequoiadendron giganteum HOM05D004674 ORTHO05D020551 1.3e-137 493.0 246 100.0
SEGI_40838 Sequoiadendron giganteum HOM05D004674 ORTHO05D007261 8.5e-81 304.3 292 58.9
ATR0568G133 Amborella trichopoda HOM05D004674 ORTHO05D007261 1.3e-41 174.1 312 36.5
ClCG01G019830 Citrullus lanatus HOM05D004674 ORTHO05D007261 1.5e-40 170.6 295 36.9
Nn5g29687 Nelumbo nucifera HOM05D004674 ORTHO05D007261 1.5e-40 170.6 292 37.3
Thecc.01G030000 Theobroma cacao HOM05D004674 ORTHO05D007261 1.5e-40 170.6 308 37.0
Aqoxy5G01578 Aquilegia oxysepala HOM05D004674 ORTHO05D007261 1.9e-40 170.2 298 35.9
TAR376G0765 Trochodendron aralioides HOM05D004674 ORTHO05D007261 3.3e-40 169.5 266 40.6
GSVIVG01018892001 Vitis vinifera HOM05D004674 ORTHO05D007261 5.6e-40 168.7 297 36.0
Os06g0472400 Oryza sativa ssp. japonica HOM05D004674 ORTHO05D007261 7.3e-40 168.3 292 38.0
Zm00001eb225760 Zea mays HOM05D004674 ORTHO05D007261 1.2e-39 167.5 295 38.3
SalBow8G1271 Salvia bowleyana HOM05D004674 ORTHO05D007261 1.6e-39 167.2 294 37.1
CsaV3_6G046560 Cucumis sativus L. HOM05D004674 ORTHO05D007261 2.1e-39 166.8 292 37.7
CANSAT01G1299 Cannabis sativa HOM05D004674 ORTHO05D007261 2.8e-39 166.4 292 37.0
AUR62004091 Chenopodium quinoa HOM05D004674 ORTHO05D007261 6.2e-39 165.2 291 37.5
Duzib264G1222 Durio zibethinus HOM05D004674 ORTHO05D007261 6.2e-39 165.2 308 36.4
SalBow8G5199 Salvia bowleyana HOM05D004674 ORTHO05D007261 6.2e-39 165.2 294 37.1
COL.COLO4_22030 Corchorus olitorius HOM05D004674 ORTHO05D007261 8.1e-39 164.9 294 36.7
Sed0001139 Sechium edule HOM05D004674 ORTHO05D007261 8.1e-39 164.9 292 36.6
TWI09G0339 Tripterygium wilfordii HOM05D004674 ORTHO05D007261 1.1e-38 164.5 292 36.6
Gorai.007G201200 Gossypium raimondii HOM05D004674 ORTHO05D007261 1.8e-38 163.7 308 35.7
HPP92_004908 Vanilla planifolia HOM05D004674 ORTHO05D007261 1.8e-38 163.7 294 36.7
Manes.02G097100 Manihot esculenta HOM05D004674 ORTHO05D007261 4.0e-38 162.5 174 50.0
CSS0017426 Camellia sinensis var. sinensis HOM05D004674 ORTHO05D007261 5.2e-38 162.2 294 37.4
Rhsim08G0121400 Rhododendron simsii HOM05D004674 ORTHO05D007261 5.2e-38 162.2 296 38.5
Gohir.A11G182300 Gossypium hirsutum HOM05D004674 ORTHO05D007261 6.8e-38 161.8 308 35.7
TAR376G0875 Trochodendron aralioides HOM05D004674 ORTHO05D007261 1.2e-37 161.0 292 36.0
AUR62007603 Chenopodium quinoa HOM05D004674 ORTHO05D007261 2.0e-37 160.2 290 36.9
PSO170G5809 Papaver somniferum HOM05D004674 ORTHO05D007261 2.6e-37 159.8 295 35.6
TAR376G0038 Trochodendron aralioides HOM05D004674 ORTHO05D007261 3.4e-37 159.5 292 36.0
Carub.0008s2809 Capsella rubella HOM05D004674 ORTHO05D007261 7.6e-37 158.3 294 36.1
Oeu019445.1 Olea europaea HOM05D004674 ORTHO05D007261 7.6e-37 158.3 275 36.0
TWI09G0580 Tripterygium wilfordii HOM05D004674 ORTHO05D007261 7.6e-37 158.3 244 41.4
FAN19G2260 Fragaria x ananassa HOM05D004674 ORTHO05D007261 9.9e-37 157.9 277 37.9
unitig_60.g25534 Utricularia gibba HOM05D004674 ORTHO05D007261 9.9e-37 157.9 296 35.1
Cc07_g09910 Coffea canephora HOM05D004674 ORTHO05D007261 1.7e-36 157.1 292 36.0
Medtr8g076950 Medicago truncatula HOM05D004674 ORTHO05D007261 1.7e-36 157.1 292 36.0
THA.LOC104821303 Tarenaya hassleriana HOM05D004674 ORTHO05D007261 1.7e-36 157.1 299 35.8
COL.COLO4_22029 Corchorus olitorius HOM05D004674 ORTHO05D007261 2.2e-36 156.8 264 37.1
Haze_03856 Corylus avellana HOM05D004674 ORTHO05D007261 2.2e-36 156.8 292 36.0
HanXRQChr09g0261191 Helianthus annuus HOM05D004674 ORTHO05D007261 2.2e-36 156.8 243 40.3
Cfa006896 Carpinus fangiana HOM05D004674 ORTHO05D007261 3.8e-36 156.0 292 37.0
DCAR_017308 Daucus carota HOM05D004674 ORTHO05D007261 4.9e-36 155.6 294 34.7
arahy.Tifrunner.gnm1.ann1.SG067W Arachis hypogaea HOM05D004674 ORTHO05D007261 6.4e-36 155.2 298 36.9
ECA232G2544 Erigeron canadensis HOM05D004674 ORTHO05D000001 6.4e-36 155.2 292 37.3
Gohir.D11G189100 Gossypium hirsutum HOM05D004674 ORTHO05D007261 8.4e-36 154.8 316 34.5
Cpa.g.sc6.166 Carica papaya HOM05D004674 ORTHO05D007261 1.1e-35 154.5 292 36.6
Glyma.02G053800 Glycine max HOM05D004674 ORTHO05D007261 1.1e-35 154.5 296 35.8
Potri.007G021000 Populus trichocarpa HOM05D004674 ORTHO05D007261 1.1e-35 154.5 292 36.3
Phvul.003G256400 Phaseolus vulgaris HOM05D004674 ORTHO05D007261 1.4e-35 154.1 291 35.4
Sabra07G0018000 Salix brachista HOM05D004674 ORTHO05D007261 1.4e-35 154.1 292 34.6
Ciclev10024970m.g Citrus clementina HOM05D004674 ORTHO05D007261 1.9e-35 153.7 292 36.0
Thhalv10003695m.g Eutrema salsugineum HOM05D004674 ORTHO05D007261 2.4e-35 153.3 293 37.2
Lsat_1_v5_gn_4_148020 Lactuca sativa HOM05D004674 ORTHO05D007261 2.4e-35 153.3 292 36.3
VMungo0251G2099 Vigna mungo HOM05D004674 ORTHO05D007261 2.4e-35 153.3 291 35.4
AT5G66420 Arabidopsis thaliana HOM05D004674 ORTHO05D007261 3.2e-35 152.9 291 36.8
Lj4A206G17 Lonicera japonica HOM05D004674 ORTHO05D007261 3.2e-35 152.9 296 35.5
MSTRG.2485 Avicennia marina HOM05D004674 ORTHO05D007261 4.1e-35 152.5 292 36.0
Ca_22335_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 4.1e-35 152.5 292 34.6
FAN23G0750 Fragaria x ananassa HOM05D004674 ORTHO05D007261 4.1e-35 152.5 299 34.8
Prupe.7G158600 Prunus persica HOM05D004674 ORTHO05D007261 4.1e-35 152.5 302 34.4
arahy.Tifrunner.gnm1.ann1.LKR1Y0 Arachis hypogaea HOM05D004674 ORTHO05D007261 5.4e-35 152.1 296 36.5
FAN26G2871 Fragaria x ananassa HOM05D004674 ORTHO05D007261 5.4e-35 152.1 301 34.6
Potri.005G120100 Populus trichocarpa HOM05D004674 ORTHO05D007261 5.4e-35 152.1 241 38.2
PGR119G1113 Punica granatum HOM05D004674 ORTHO05D007261 1.6e-34 150.6 296 35.5
TPR.G21548 Trifolium pratense HOM05D004674 ORTHO05D007261 1.6e-34 150.6 292 34.9
EL10As8g23909 Beta vulgaris HOM05D004674 ORTHO05D007261 2.1e-34 150.2 294 35.0
Sp2g30300 Schrenkiella parvula HOM05D004674 ORTHO05D007261 2.1e-34 150.2 290 35.2
SGA_v2.0_scaffold12G06320 Striga asiatica HOM05D004674 ORTHO05D007261 2.7e-34 149.8 294 35.4
Aa31LG1G14940 Aethionema arabicum HOM05D004674 ORTHO05D007261 3.5e-34 149.4 291 35.7
AL8G45110 Arabidopsis lyrata HOM05D004674 ORTHO05D007261 4.6e-34 149.1 292 34.9
FAN28G0143 Fragaria x ananassa HOM05D004674 ORTHO05D007261 4.6e-34 149.1 302 34.1
Atru.chr3.699 Acer truncatum HOM05D004674 ORTHO05D007261 6.0e-34 148.7 291 35.7
QL06p035418 Quercus lobata HOM05D004674 ORTHO05D007261 7.8e-34 148.3 292 34.6
QL06p035429 Quercus lobata HOM05D004674 ORTHO05D007261 1.0e-33 147.9 292 34.6
Atru.chr3.652 Acer truncatum HOM05D004674 ORTHO05D007261 1.7e-33 147.1 243 38.7
Migut.H02523 Erythranthe guttata HOM05D004674 ORTHO05D007261 1.7e-33 147.1 245 39.2
Peaxi162Scf00008g03325 Petunia axillaris HOM05D004674 ORTHO05D007261 3.0e-33 146.4 294 36.4
RcHm_v2.0_Chr2g0100861 Rosa chinensis HOM05D004674 ORTHO05D007261 3.0e-33 146.4 301 33.2
BcaB02g10033 Brassica carinata HOM05D004674 ORTHO05D007261 5.1e-33 145.6 290 35.9
C07p25500 Brassica napus HOM05D004674 ORTHO05D007261 5.1e-33 145.6 292 34.6
A07p17540 Brassica napus HOM05D004674 ORTHO05D007261 6.6e-33 145.2 290 34.5
Lalb_Chr16g0391041 Lupinus albus HOM05D004674 ORTHO05D007261 6.6e-33 145.2 240 38.3
Lj4g0022194 Lotus japonicus HOM05D004674 ORTHO05D007261 8.6e-33 144.8 241 38.6
PGSC0003DMG400015491 Solanum tuberosum HOM05D004674 ORTHO05D007261 1.1e-32 144.4 294 34.4
Sopen02g013570 Solanum pennellii HOM05D004674 ORTHO05D007261 1.5e-32 144.1 294 34.0
BcaC06g34697 Brassica carinata HOM05D004674 ORTHO05D007261 1.9e-32 143.7 292 34.2
BraA07t29474Z Brassica rapa HOM05D004674 ORTHO05D007261 2.5e-32 143.3 290 34.1
Gorai.007G201400 Gossypium raimondii HOM05D004674 ORTHO05D007261 2.5e-32 143.3 254 36.6
Hund16446 Selenicereus undatus HOM05D004674 ORTHO05D007261 2.5e-32 143.3 295 35.9
TAR376G0961 Trochodendron aralioides HOM05D004674 ORTHO05D007261 2.5e-32 143.3 296 34.1
Eucgr.I02404 Eucalyptus grandis HOM05D004674 ORTHO05D007261 4.3e-32 142.5 292 33.6
CAN.G1019.6 Capsicum annuum HOM05D004674 ORTHO05D007261 5.6e-32 142.1 294 34.0
Gohir.D11G189150 Gossypium hirsutum HOM05D004674 ORTHO05D007261 1.2e-31 141.0 254 36.2
Solyc02g062560.3 Solanum lycopersicum HOM05D004674 ORTHO05D007261 1.2e-31 141.0 243 37.0
CARHR034750 Cardamine hirsuta HOM05D004674 ORTHO05D007261 1.6e-31 140.6 290 34.8
Nitab4.5_0000136g0250 Nicotiana tabacum HOM05D004674 ORTHO05D007261 2.1e-31 140.2 292 33.6
Pp3c20_8030 Physcomitrium patens HOM05D004674 ORTHO05D007261 2.1e-31 140.2 239 37.7
BolC7t43070H Brassica oleracea HOM05D004674 ORTHO05D007261 2.8e-31 139.8 249 36.9
CiPaw.07G049300 Carya illinoinensis HOM05D004674 ORTHO05D007261 3.6e-31 139.4 240 37.5
Nitab4.5_0001525g0030 Nicotiana tabacum HOM05D004674 ORTHO05D007261 3.6e-31 139.4 292 34.2
Sc16g0002550 Simmondsia chinensis HOM05D004674 ORTHO05D007261 8.1e-31 138.3 292 33.2
MD15G1256300 Malus domestica HOM05D004674 ORTHO05D007261 1.8e-30 137.1 273 32.6
PSO170G6195 Papaver somniferum HOM05D004674 ORTHO05D007261 2.0e-29 133.7 238 35.3
Actinidia35628 Actinidia chinensis HOM05D004674 ORTHO05D007261 2.6e-29 133.3 217 38.7
SMO367G0601 Selaginella moellendorffii HOM05D004674 ORTHO05D007261 7.6e-29 131.7 244 36.9
PSO407G0425 Papaver somniferum HOM05D004674 ORTHO05D007261 9.9e-29 131.3 236 33.1
MELO3C010392.2 Cucumis melo HOM05D004674 ORTHO05D007261 1.7e-28 130.6 173 43.4
Psat4g095640 Pisum sativum HOM05D004674 ORTHO05D007261 3.2e-27 126.3 292 31.5
FvH4_1g12760 Fragaria vesca HOM05D004674 ORTHO05D007261 8.7e-25 118.2 237 34.2
AagrBONN_evm.TU.Sc2ySwM_344.2833 Anthoceros agrestis HOM05D004674 ORTHO05D007261 2.8e-23 113.2 314 29.6
MELO3C007854.2 Cucumis melo HOM05D004674 ORTHO05D007261 8.1e-23 111.7 90 60.0
Actinidia19204 Actinidia chinensis HOM05D004674 ORTHO05D007261 1.5e-21 107.5 211 35.1
Dinv40019 Davidia involucrata HOM05D004674 ORTHO05D007261 2.4e-19 100.1 229 34.1
Gohir.A11G182500 Gossypium hirsutum HOM05D004674 ORTHO05D007261 4.2e-19 99.4 224 31.7
Duzib147G1548 Durio zibethinus HOM05D004674 ORTHO05D007261 2.3e-17 93.6 118 44.1
Dinv40102 Davidia involucrata HOM05D004674 ORTHO05D020551 3.0e-17 93.2 62 74.2
MD02G1142800 Malus domestica HOM05D004674 ORTHO05D020551 3.9e-17 92.8 69 60.9
Ca_07052_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 2.4e-14 83.6 136 37.5
Ca_22377_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 2.4e-14 83.6 136 37.5
arahy.Tifrunner.gnm1.ann1.TV0A1X Arachis hypogaea HOM05D004674 ORTHO05D007261 5.5e-11 72.4 57 59.6
Lj4C205T11 Lonicera japonica HOM05D004674 ORTHO05D007261 9.3e-11 71.6 182 31.9
Phvul.003G256200 Phaseolus vulgaris HOM05D004674 ORTHO05D007261 2.3e-09 67.0 75 48.0
Psat2g002040 Pisum sativum HOM05D004674 ORTHO05D327579 3.3e-08 63.2 54 51.9
GSVIVG01005333001 Vitis vinifera HOM05D004674 ORTHO05D020551 2.1e-07 60.5 44 59.1
GSVIVG01017515001 Vitis vinifera HOM05D004674 ORTHO05D020551 2.1e-07 60.5 44 59.1
FAN14G4531 Fragaria x ananassa HOM05D004674 ORTHO05D020551 1.1e-06 58.2 85 40.0


User provided reference genes

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