Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19045 Sequoiadendron giganteum HOM05D003776 ORTHO05D004459 5.3e-53 210.7 102 100.0
Pp3c4_20350 Physcomitrium patens HOM05D003776 ORTHO05D004459 1.1e-21 106.7 79 65.8
AagrBONN_evm.TU.Sc2ySwM_228.87 Anthoceros agrestis HOM05D003776 ORTHO05D004459 3.5e-20 101.7 91 57.1
Mapoly0052s0095 Marchantia polymorpha HOM05D003776 ORTHO05D004459 2.9e-19 98.6 74 62.2
ATR0322G028 Amborella trichopoda HOM05D003776 ORTHO05D004459 1.7e-14 82.8 75 57.3
CBR_g37692 Chara braunii HOM05D003776 ORTHO05D004459 4.9e-14 81.3 65 61.5
QL02p088328 Quercus lobata HOM05D003776 ORTHO05D004459 1.1e-13 80.1 66 57.6
RcHm_v2.0_Chr2g0088511 Rosa chinensis HOM05D003776 ORTHO05D004459 2.4e-13 79.0 79 51.9
THA.LOC104808989 Tarenaya hassleriana HOM05D003776 ORTHO05D004459 3.2e-13 78.6 74 55.4
Nn8g39448 Nelumbo nucifera HOM05D003776 ORTHO05D004459 4.1e-13 78.2 67 59.7
Duzib168G2222 Durio zibethinus HOM05D003776 ORTHO05D004459 7.0e-13 77.4 66 57.6
FvH4_1g03320 Fragaria vesca HOM05D003776 ORTHO05D004459 7.0e-13 77.4 79 50.6
FAN26G1438 Fragaria x ananassa HOM05D003776 ORTHO05D004459 7.0e-13 77.4 79 50.6
FAN28G2120 Fragaria x ananassa HOM05D003776 ORTHO05D004459 9.2e-13 77.0 79 49.4
GSVIVG01015528001 Vitis vinifera HOM05D003776 ORTHO05D004459 9.2e-13 77.0 69 56.5
Atru.chr7.1164 Acer truncatum HOM05D003776 ORTHO05D004459 1.2e-12 76.6 66 56.1
FAN23G1640 Fragaria x ananassa HOM05D003776 ORTHO05D004459 1.2e-12 76.6 79 49.4
Thecc.09G126200 Theobroma cacao HOM05D003776 ORTHO05D004459 1.2e-12 76.6 66 57.6
TPR.G21471 Trifolium pratense HOM05D003776 ORTHO05D004459 1.6e-12 76.3 66 60.6
Cfa003371 Carpinus fangiana HOM05D003776 ORTHO05D004459 2.0e-12 75.9 66 57.6
Haze_25580 Corylus avellana HOM05D003776 ORTHO05D004459 2.0e-12 75.9 66 57.6
FAN19G1245 Fragaria x ananassa HOM05D003776 ORTHO05D004459 2.0e-12 75.9 79 49.4
TWI34G1787 Tripterygium wilfordii HOM05D003776 ORTHO05D004459 2.0e-12 75.9 68 58.8
AT5G51200 Arabidopsis thaliana HOM05D003776 ORTHO05D004459 2.7e-12 75.5 66 59.1
Gohir.D07G039800 Gossypium hirsutum HOM05D003776 ORTHO05D004459 3.5e-12 75.1 66 57.6
Gorai.001G042000 Gossypium raimondii HOM05D003776 ORTHO05D004459 3.5e-12 75.1 66 57.6
Lj3g0001115 Lotus japonicus HOM05D003776 ORTHO05D004459 3.5e-12 75.1 66 59.1
Manes.05G119700 Manihot esculenta HOM05D003776 ORTHO05D004459 3.5e-12 75.1 70 54.3
Psat1g024680 Pisum sativum HOM05D003776 ORTHO05D004459 3.5e-12 75.1 66 57.6
Sp4g09050 Schrenkiella parvula HOM05D003776 ORTHO05D004459 3.5e-12 75.1 66 59.1
AL8G25470 Arabidopsis lyrata HOM05D003776 ORTHO05D004459 4.6e-12 74.7 66 59.1
CARHR118630 Cardamine hirsuta HOM05D003776 ORTHO05D004459 4.6e-12 74.7 66 59.1
Thhalv10002339m.g Eutrema salsugineum HOM05D003776 ORTHO05D004459 4.6e-12 74.7 66 57.6
MD02G1032900 Malus domestica HOM05D003776 ORTHO05D004459 4.6e-12 74.7 64 56.2
Rhsim03G0247900 Rhododendron simsii HOM05D003776 ORTHO05D004459 4.6e-12 74.7 67 53.7
VMungo1309G0107 Vigna mungo HOM05D003776 ORTHO05D004459 4.6e-12 74.7 66 57.6
Carub.0008s1091 Capsella rubella HOM05D003776 ORTHO05D004459 6.0e-12 74.3 66 59.1
Cc06_g08530 Coffea canephora HOM05D003776 ORTHO05D004459 7.8e-12 73.9 67 52.2
Glyma.06G222100 Glycine max HOM05D003776 ORTHO05D004459 7.8e-12 73.9 66 57.6
Gohir.A07G035800 Gossypium hirsutum HOM05D003776 ORTHO05D004459 7.8e-12 73.9 66 56.1
Lalb_Chr08g0234811 Lupinus albus HOM05D003776 ORTHO05D004459 7.8e-12 73.9 66 56.1
Medtr7g099880 Medicago truncatula HOM05D003776 ORTHO05D004459 7.8e-12 73.9 66 57.6
Sabra06G0094200 Salix brachista HOM05D003776 ORTHO05D004459 7.8e-12 73.9 66 59.1
CANSAT11G0130 Cannabis sativa HOM05D003776 ORTHO05D004459 1.0e-11 73.6 66 57.6
DCAR_017818 Daucus carota HOM05D003776 ORTHO05D004459 1.0e-11 73.6 78 51.3
Prupe.7G242500 Prunus persica HOM05D003776 ORTHO05D004459 1.0e-11 73.6 68 52.9
vmacro06129 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 1.0e-11 73.6 69 50.7
A07p17720 Brassica napus HOM05D003776 ORTHO05D004459 1.3e-11 73.2 66 57.6
BraA07t29494Z Brassica rapa HOM05D003776 ORTHO05D004459 1.3e-11 73.2 66 57.6
Phvul.009G198200 Phaseolus vulgaris HOM05D003776 ORTHO05D004459 1.3e-11 73.2 66 56.1
CiPaw.03G244000 Carya illinoinensis HOM05D003776 ORTHO05D004459 1.7e-11 72.8 66 54.5
Eucgr.C04218 Eucalyptus grandis HOM05D003776 ORTHO05D004459 1.7e-11 72.8 72 52.8
Potri.006G119600 Populus trichocarpa HOM05D003776 ORTHO05D004459 2.3e-11 72.4 66 57.6
C07p25670 Brassica napus HOM05D003776 ORTHO05D004459 3.0e-11 72.0 66 56.1
BolC7t43085H Brassica oleracea HOM05D003776 ORTHO05D004459 3.0e-11 72.0 66 56.1
Cpa.g.sc75.30 Carica papaya HOM05D003776 ORTHO05D004459 3.0e-11 72.0 66 53.0
Ciclev10007244m.g Citrus clementina HOM05D003776 ORTHO05D004459 3.0e-11 72.0 66 54.5
TAR625G0211 Trochodendron aralioides HOM05D003776 ORTHO05D004459 3.0e-11 72.0 66 57.6
AUR62011127 Chenopodium quinoa HOM05D003776 ORTHO05D004459 3.9e-11 71.6 72 50.0
Ca_14403_v3 Cicer arietinum L. HOM05D003776 ORTHO05D004459 3.9e-11 71.6 66 56.1
Ca_29538_v3 Cicer arietinum L. HOM05D003776 ORTHO05D004459 3.9e-11 71.6 66 56.1
Lalb_Chr11g0072121 Lupinus albus HOM05D003776 ORTHO05D004459 3.9e-11 71.6 66 56.1
PGR102G3028 Punica granatum HOM05D003776 ORTHO05D004459 3.9e-11 71.6 65 55.4
SMO347G0235 Selaginella moellendorffii HOM05D003776 ORTHO05D004459 5.0e-11 71.2 77 48.1
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 6.6e-11 70.9 66 56.1
EL10Ac8g18652 Beta vulgaris HOM05D003776 ORTHO05D004459 6.6e-11 70.9 69 52.2
Dinv36529 Davidia involucrata HOM05D003776 ORTHO05D004459 6.6e-11 70.9 69 50.7
Os02g0202250 Oryza sativa ssp. japonica HOM05D003776 ORTHO05D004459 8.6e-11 70.5 67 49.3
HanXRQChr10g0315491 Helianthus annuus HOM05D003776 ORTHO05D004459 1.1e-10 70.1 67 52.2
MSTRG.19598 Avicennia marina HOM05D003776 ORTHO05D004459 1.5e-10 69.7 66 54.5
ECA234G1804 Erigeron canadensis HOM05D003776 ORTHO05D004459 1.5e-10 69.7 67 52.2
Hma1.2p1_2368F.1_g320720 Hydrangea macrophylla HOM05D003776 ORTHO05D004459 1.5e-10 69.7 68 51.5
Oeu055886.1 Olea europaea HOM05D003776 ORTHO05D004459 1.5e-10 69.7 67 50.7
Solyc12g006480.2 Solanum lycopersicum HOM05D003776 ORTHO05D004459 1.5e-10 69.7 71 50.7
Sopen12g002420 Solanum pennellii HOM05D003776 ORTHO05D004459 1.5e-10 69.7 71 50.7
Aqoxy3G01756 Aquilegia oxysepala HOM05D003776 ORTHO05D004459 1.9e-10 69.3 68 54.4
CsaV3_2G002830 Cucumis sativus L. HOM05D003776 ORTHO05D004459 1.9e-10 69.3 68 50.0
Lsat_1_v5_gn_5_96021 Lactuca sativa HOM05D003776 ORTHO05D004459 1.9e-10 69.3 67 50.7
Hund09133 Selenicereus undatus HOM05D003776 ORTHO05D004459 1.9e-10 69.3 67 49.3
Sc08g0006640 Simmondsia chinensis HOM05D003776 ORTHO05D004459 1.9e-10 69.3 66 50.0
Nitab4.5_0002658g0150 Nicotiana tabacum HOM05D003776 ORTHO05D004459 5.6e-10 67.8 67 50.7
CAN.G816.2 Capsicum annuum HOM05D003776 ORTHO05D004459 7.3e-10 67.4 71 49.3
CDE02G1576 Ceratophyllum demersum HOM05D003776 ORTHO05D004459 7.3e-10 67.4 65 52.3
Peaxi162Scf01211g00016 Petunia axillaris HOM05D003776 ORTHO05D004459 9.5e-10 67.0 67 50.7
MELO3C004510.2 Cucumis melo HOM05D003776 ORTHO05D004459 1.2e-09 66.6 68 48.5
Aqoxy7G02178 Aquilegia oxysepala HOM05D003776 ORTHO05D004459 1.6e-09 66.2 67 53.7
AUR62013362 Chenopodium quinoa HOM05D003776 ORTHO05D004459 1.6e-09 66.2 65 52.3
ClCG11G003010 Citrullus lanatus HOM05D003776 ORTHO05D004459 2.1e-09 65.9 67 47.8
Nitab4.5_0008846g0010 Nicotiana tabacum HOM05D003776 ORTHO05D004459 2.1e-09 65.9 67 50.7
Ah.09g226220 Amaranthus hybridus HOM05D003776 ORTHO05D004459 2.8e-09 65.5 69 49.3
PSO170G4267 Papaver somniferum HOM05D003776 ORTHO05D004459 3.6e-09 65.1 73 43.8
Sed0006794 Sechium edule HOM05D003776 ORTHO05D004459 3.6e-09 65.1 68 45.6
HPP92_008667 Vanilla planifolia HOM05D003776 ORTHO05D004459 3.6e-09 65.1 67 52.2
Migut.J01158 Erythranthe guttata HOM05D003776 ORTHO05D004459 4.7e-09 64.7 66 50.0
PSO455G0084 Papaver somniferum HOM05D003776 ORTHO05D004459 4.7e-09 64.7 73 43.8
Actinidia07427 Actinidia chinensis HOM05D003776 ORTHO05D004459 6.2e-09 64.3 49 65.3
arahy.Tifrunner.gnm1.ann1.6DBV70 Arachis hypogaea HOM05D003776 ORTHO05D004459 1.1e-08 63.5 75 49.3
Prupe.1G010000 Prunus persica HOM05D003776 ORTHO05D004459 4.0e-08 61.6 60 51.7


User provided reference genes

Program Settings