Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_18930 Sequoiadendron giganteum HOM05D003758 ORTHO05D004344 1.3e-137 493.0 244 100.0
MBI19_g03239_MAGBIO Magnolia biondii HOM05D003758 ORTHO05D004344 2.7e-18 96.7 242 31.0
Dinv37509 Davidia involucrata HOM05D003758 ORTHO05D004344 7.3e-16 88.6 237 29.1
ATR0693G226 Amborella trichopoda HOM05D003758 ORTHO05D004344 1.6e-15 87.4 243 29.2
Atru.chr5.975 Acer truncatum HOM05D003758 ORTHO05D004344 2.8e-15 86.7 236 28.8
Lj4g0003540 Lotus japonicus HOM05D003758 ORTHO05D004344 2.8e-15 86.7 242 29.3
Thecc.01G315600 Theobroma cacao HOM05D003758 ORTHO05D004344 6.2e-15 85.5 243 29.2
Dinv10116 Davidia involucrata HOM05D003758 ORTHO05D004344 1.8e-14 84.0 245 29.8
Lj3g0021338 Lotus japonicus HOM05D003758 ORTHO05D004344 2.3e-14 83.6 245 31.0
PSO384G2631 Papaver somniferum HOM05D003758 ORTHO05D004344 5.2e-14 82.4 240 28.8
FAN23G2430 Fragaria x ananassa HOM05D003758 ORTHO05D004344 8.9e-14 81.6 241 28.6
Gorai.007G121400 Gossypium raimondii HOM05D003758 ORTHO05D004344 8.9e-14 81.6 247 29.1
TAR633G1738 Trochodendron aralioides HOM05D003758 ORTHO05D004344 8.9e-14 81.6 239 27.6
Ciclev10023744m.g Citrus clementina HOM05D003758 ORTHO05D004344 1.2e-13 81.3 245 27.3
Phvul.011G184700 Phaseolus vulgaris HOM05D003758 ORTHO05D004344 1.2e-13 81.3 240 28.8
Aqoxy6G02867 Aquilegia oxysepala HOM05D003758 ORTHO05D004344 1.5e-13 80.9 237 28.7
Psat4g209760 Pisum sativum HOM05D003758 ORTHO05D004344 1.5e-13 80.9 240 30.8
Cfa004172 Carpinus fangiana HOM05D003758 ORTHO05D004344 2.0e-13 80.5 244 30.7
PSO339G3435 Papaver somniferum HOM05D003758 ORTHO05D004344 2.0e-13 80.5 246 29.3
VMungo1127G2096 Vigna mungo HOM05D003758 ORTHO05D004344 2.6e-13 80.1 240 30.4
Nitab4.5_0004743g0050 Nicotiana tabacum HOM05D003758 ORTHO05D004344 3.4e-13 79.7 240 28.3
FAN26G0338 Fragaria x ananassa HOM05D003758 ORTHO05D004344 4.4e-13 79.3 241 28.6
Gohir.A11G108400 Gossypium hirsutum HOM05D003758 ORTHO05D004344 4.4e-13 79.3 245 29.4
Gohir.D11G112900 Gossypium hirsutum HOM05D003758 ORTHO05D004344 4.4e-13 79.3 248 29.8
Nn6g32438 Nelumbo nucifera HOM05D003758 ORTHO05D004344 4.4e-13 79.3 246 29.7
Zm00001eb331260 Zea mays HOM05D003758 ORTHO05D004344 4.4e-13 79.3 243 28.0
Ca_26914_v3 Cicer arietinum L. HOM05D003758 ORTHO05D004344 5.8e-13 79.0 241 28.6
Ca_29676_v3 Cicer arietinum L. HOM05D003758 ORTHO05D004344 5.8e-13 79.0 241 28.6
TPR.G35143 Trifolium pratense HOM05D003758 ORTHO05D004344 5.8e-13 79.0 240 27.1
Atru.chr9.1365 Acer truncatum HOM05D003758 ORTHO05D004344 7.5e-13 78.6 242 27.3
FAN28G1741 Fragaria x ananassa HOM05D003758 ORTHO05D004344 7.5e-13 78.6 241 28.2
TPR.G844 Trifolium pratense HOM05D003758 ORTHO05D004344 7.5e-13 78.6 240 26.7
AagrBONN_evm.TU.Sc2ySwM_344.4368 Anthoceros agrestis HOM05D003758 ORTHO05D004344 9.9e-13 78.2 253 26.9
Haze_15238 Corylus avellana HOM05D003758 ORTHO05D004344 9.9e-13 78.2 244 28.7
GSVIVG01020570001 Vitis vinifera HOM05D003758 ORTHO05D004344 1.7e-12 77.4 237 28.3
CAN.G135.34 Capsicum annuum HOM05D003758 ORTHO05D004344 2.9e-12 76.6 240 30.0
Glyma.15G216400 Glycine max HOM05D003758 ORTHO05D004344 2.9e-12 76.6 241 29.0
RcHm_v2.0_Chr3g0487391 Rosa chinensis HOM05D003758 ORTHO05D004344 2.9e-12 76.6 233 26.6
CiPaw.13G125700 Carya illinoinensis HOM05D003758 ORTHO05D004344 3.7e-12 76.3 238 27.3
Haze_16412 Corylus avellana HOM05D003758 ORTHO05D004344 3.7e-12 76.3 243 29.6
Nitab4.5_0000321g0240 Nicotiana tabacum HOM05D003758 ORTHO05D004344 3.7e-12 76.3 239 26.8
arahy.Tifrunner.gnm1.ann1.CZ320C Arachis hypogaea HOM05D003758 ORTHO05D004344 6.4e-12 75.5 240 28.3
Eucgr.F03545 Eucalyptus grandis HOM05D003758 ORTHO05D004344 6.4e-12 75.5 233 28.8
Glyma.16G071100 Glycine max HOM05D003758 ORTHO05D004344 6.4e-12 75.5 241 29.9
arahy.Tifrunner.gnm1.ann1.8X0TS3 Arachis hypogaea HOM05D003758 ORTHO05D004344 8.3e-12 75.1 240 28.8
Os11g0677500 Oryza sativa ssp. japonica HOM05D003758 ORTHO05D004344 1.4e-11 74.3 244 29.1
Psat7g259120 Pisum sativum HOM05D003758 ORTHO05D004344 1.4e-11 74.3 240 28.3
FvH4_1g27070 Fragaria vesca HOM05D003758 ORTHO05D004344 1.9e-11 73.9 241 26.6
FAN19G1056 Fragaria x ananassa HOM05D003758 ORTHO05D004344 1.9e-11 73.9 241 26.6
Prupe.3G010600 Prunus persica HOM05D003758 ORTHO05D004344 1.9e-11 73.9 236 26.3
Manes.08G002202 Manihot esculenta HOM05D003758 ORTHO05D004344 3.2e-11 73.2 235 28.9
Manes.17G075900 Manihot esculenta HOM05D003758 ORTHO05D004344 3.2e-11 73.2 235 28.9
Nitab4.5_0004412g0060 Nicotiana tabacum HOM05D003758 ORTHO05D004344 3.2e-11 73.2 239 28.0
MSTRG.19341 Avicennia marina HOM05D003758 ORTHO05D004344 4.1e-11 72.8 240 28.8
Cc02_g30290 Coffea canephora HOM05D003758 ORTHO05D004344 7.1e-11 72.0 237 24.9
Lalb_Chr02g0146891 Lupinus albus HOM05D003758 ORTHO05D004344 7.1e-11 72.0 241 28.6
Manes.05G014400 Manihot esculenta HOM05D003758 ORTHO05D004344 7.1e-11 72.0 235 28.9
Actinidia03664 Actinidia chinensis HOM05D003758 ORTHO05D004344 9.2e-11 71.6 236 27.5
vmacro07358 Vaccinium macrocarpon HOM05D003758 ORTHO05D004344 9.2e-11 71.6 246 27.6
Duzib211G0665 Durio zibethinus HOM05D003758 ORTHO05D004344 1.2e-10 71.2 246 27.2
Manes.05G012284 Manihot esculenta HOM05D003758 ORTHO05D004344 1.2e-10 71.2 236 29.2
Manes.05G014105 Manihot esculenta HOM05D003758 ORTHO05D004344 1.2e-10 71.2 236 29.2
Medtr4g008840 Medicago truncatula HOM05D003758 ORTHO05D004344 1.2e-10 71.2 237 27.0
vmacro23005 Vaccinium macrocarpon HOM05D003758 ORTHO05D004344 1.2e-10 71.2 246 27.2
Manes.05G007428 Manihot esculenta HOM05D003758 ORTHO05D004344 1.6e-10 70.9 235 28.5
HPP92_010605 Vanilla planifolia HOM05D003758 ORTHO05D004344 1.6e-10 70.9 233 27.9
AUR62024624 Chenopodium quinoa HOM05D003758 ORTHO05D004344 2.1e-10 70.5 237 28.3
Solyc11g007800.3 Solanum lycopersicum HOM05D003758 ORTHO05D004344 2.1e-10 70.5 243 28.0
Lj2A672T52 Lonicera japonica HOM05D003758 ORTHO05D004344 2.7e-10 70.1 243 23.9
CANSAT35G0058 Cannabis sativa HOM05D003758 ORTHO05D004344 3.5e-10 69.7 242 29.3
Cpa.g.sc18.69 Carica papaya HOM05D003758 ORTHO05D004344 3.5e-10 69.7 235 27.7
Manes.05G010463 Manihot esculenta HOM05D003758 ORTHO05D004344 3.5e-10 69.7 235 28.5
PGSC0003DMG400027361 Solanum tuberosum HOM05D003758 ORTHO05D004344 3.5e-10 69.7 244 27.9
Sopen11g003660 Solanum pennellii HOM05D003758 ORTHO05D004344 6.0e-10 68.9 239 27.6
Peaxi162Scf00192g01619 Petunia axillaris HOM05D003758 ORTHO05D004344 7.8e-10 68.6 239 26.8
COL.COLO4_23214 Corchorus olitorius HOM05D003758 ORTHO05D004344 1.0e-09 68.2 244 27.9
TAR629G2570 Trochodendron aralioides HOM05D003758 ORTHO05D004344 1.7e-09 67.4 241 25.7
Hund21053 Selenicereus undatus HOM05D003758 ORTHO05D004344 2.3e-09 67.0 242 28.5
CSS0004415 Camellia sinensis var. sinensis HOM05D003758 ORTHO05D004344 3.0e-09 66.6 237 26.2
Mapoly0039s0104 Marchantia polymorpha HOM05D003758 ORTHO05D004344 3.0e-09 66.6 253 24.5
CsaV3_4G006310 Cucumis sativus L. HOM05D003758 ORTHO05D004344 3.9e-09 66.2 239 25.9
Oeu049922.1 Olea europaea HOM05D003758 ORTHO05D004344 5.1e-09 65.9 234 23.5
CSS0000786 Camellia sinensis var. sinensis HOM05D003758 ORTHO05D004344 1.1e-08 64.7 237 24.9
AUR62011780 Chenopodium quinoa HOM05D003758 ORTHO05D004344 2.5e-08 63.5 234 26.5
QL03p022487 Quercus lobata HOM05D003758 ORTHO05D004344 2.5e-08 63.5 238 25.2
MD17G1277400 Malus domestica HOM05D003758 ORTHO05D004344 3.3e-08 63.2 236 27.5
Potri.002G194100 Populus trichocarpa HOM05D003758 ORTHO05D004344 3.3e-08 63.2 241 32.4
SalBow3G2832 Salvia bowleyana HOM05D003758 ORTHO05D004344 3.3e-08 63.2 236 25.4
Eucgr.D02543 Eucalyptus grandis HOM05D003758 ORTHO05D004344 9.5e-08 61.6 231 26.8
CiPaw.05G057600 Carya illinoinensis HOM05D003758 ORTHO05D004344 3.6e-07 59.7 237 25.3
MELO3C016319.2 Cucumis melo HOM05D003758 ORTHO05D004344 4.7e-07 59.3 239 23.4
Pp3c2_6540 Physcomitrium patens HOM05D003758 ORTHO05D004344 6.2e-07 58.9 246 26.8
CDE11G0119 Ceratophyllum demersum HOM05D003758 ORTHO05D004344 1.1e-06 58.2 246 23.6
TWI36G1552 Tripterygium wilfordii HOM05D003758 ORTHO05D004344 1.4e-06 57.8 242 24.8
Sed0003653 Sechium edule HOM05D003758 ORTHO05D004344 4.0e-06 56.2 238 23.9


User provided reference genes

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