Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11727 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 0.0e+00 1265.4 623 100.0
SEGI_18724 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 0.0e+00 1265.4 623 100.0
PSO782G3793 Papaver somniferum HOM05D003919 ORTHO05D004906 4.6e-208 728.4 621 56.5
ATR0618G139 Amborella trichopoda HOM05D003919 ORTHO05D004906 1.3e-207 726.9 621 54.1
TAR374G1487 Trochodendron aralioides HOM05D003919 ORTHO05D004906 1.8e-207 726.5 624 55.9
Thecc.02G160300 Theobroma cacao HOM05D003919 ORTHO05D004906 3.1e-204 715.7 622 54.5
QL03p046003 Quercus lobata HOM05D003919 ORTHO05D004906 2.6e-203 712.6 622 54.2
MD16G1001800 Malus domestica HOM05D003919 ORTHO05D004906 1.7e-202 709.9 622 54.5
Duzib132G0455 Durio zibethinus HOM05D003919 ORTHO05D004906 2.2e-202 709.5 622 54.5
CiPaw.05G168700 Carya illinoinensis HOM05D003919 ORTHO05D004906 3.8e-202 708.8 622 54.7
CSS0046709 Camellia sinensis var. sinensis HOM05D003919 ORTHO05D004906 8.5e-202 707.6 622 54.8
Prupe.1G347000 Prunus persica HOM05D003919 ORTHO05D004906 1.4e-201 706.8 622 54.0
RcHm_v2.0_Chr4g0446631 Rosa chinensis HOM05D003919 ORTHO05D004906 2.5e-201 706.1 622 54.3
Haze_11754 Corylus avellana HOM05D003919 ORTHO05D004906 1.4e-199 700.3 622 53.5
Cfa008737 Carpinus fangiana HOM05D003919 ORTHO05D004906 1.1e-198 697.2 622 53.2
Actinidia04322 Actinidia chinensis HOM05D003919 ORTHO05D004906 2.5e-198 696.0 622 53.5
Aqoxy3G04259 Aquilegia oxysepala HOM05D003919 ORTHO05D004906 4.3e-198 695.3 622 55.3
Atru.chr11.1166 Acer truncatum HOM05D003919 ORTHO05D004906 5.7e-198 694.9 622 53.4
COL.COLO4_13755 Corchorus olitorius HOM05D003919 ORTHO05D004906 9.7e-198 694.1 622 53.9
Nn4g24949 Nelumbo nucifera HOM05D003919 ORTHO05D004906 1.3e-197 693.7 622 53.7
FAN07G2510 Fragaria x ananassa HOM05D003919 ORTHO05D004906 1.7e-197 693.3 622 52.9
FvH4_4g36870 Fragaria vesca HOM05D003919 ORTHO05D004906 2.8e-197 692.6 622 52.7
Gorai.008G149000 Gossypium raimondii HOM05D003919 ORTHO05D004906 4.8e-197 691.8 622 53.9
Gohir.A12G134051 Gossypium hirsutum HOM05D003919 ORTHO05D004906 1.8e-196 689.9 622 53.4
Ciclev10030469m.g Citrus clementina HOM05D003919 ORTHO05D004906 2.4e-196 689.5 622 52.7
THA.LOC104819381 Tarenaya hassleriana HOM05D003919 ORTHO05D004906 3.1e-196 689.1 623 52.8
Gohir.D12G137500 Gossypium hirsutum HOM05D003919 ORTHO05D004906 4.1e-196 688.7 622 53.7
FAN12G0111 Fragaria x ananassa HOM05D003919 ORTHO05D004906 6.9e-196 688.0 622 52.4
Potri.005G093000 Populus trichocarpa HOM05D003919 ORTHO05D004906 6.9e-196 688.0 622 53.1
ClCG09G004560 Citrullus lanatus HOM05D003919 ORTHO05D004906 9.1e-196 687.6 622 53.2
vmacro10895 Vaccinium macrocarpon HOM05D003919 ORTHO05D004906 1.0e-194 684.1 619 53.0
FAN17G2968 Fragaria x ananassa HOM05D003919 ORTHO05D004906 1.3e-194 683.7 622 52.4
TWI53G0046 Tripterygium wilfordii HOM05D003919 ORTHO05D004906 3.8e-194 682.2 622 53.2
CsaV3_7G030590 Cucumis sativus L. HOM05D003919 ORTHO05D004906 5.0e-194 681.8 620 52.7
MELO3C023597.2 Cucumis melo HOM05D003919 ORTHO05D004906 8.5e-194 681.0 620 52.9
Rhsim09G0081500 Rhododendron simsii HOM05D003919 ORTHO05D004906 4.2e-193 678.7 622 52.4
Manes.04G066100 Manihot esculenta HOM05D003919 ORTHO05D004906 2.3e-191 672.9 622 52.4
Aa31LG11G2600 Aethionema arabicum HOM05D003919 ORTHO05D004906 1.1e-190 670.6 622 51.8
Peaxi162Scf00363g00329 Petunia axillaris HOM05D003919 ORTHO05D004906 4.4e-190 668.7 620 52.4
Carub.0006s2090 Capsella rubella HOM05D003919 ORTHO05D004906 5.7e-190 668.3 622 51.4
Cc11_g02410 Coffea canephora HOM05D003919 ORTHO05D004906 5.7e-190 668.3 622 52.1
Sed0027848 Sechium edule HOM05D003919 ORTHO05D004906 9.7e-190 667.5 620 52.3
Thhalv10003499m.g Eutrema salsugineum HOM05D003919 ORTHO05D004906 2.2e-189 666.4 623 50.9
CDE08G0505 Ceratophyllum demersum HOM05D003919 ORTHO05D004906 2.8e-189 666.0 623 52.5
Sabra05G0077100 Salix brachista HOM05D003919 ORTHO05D004906 2.4e-188 662.9 622 51.6
CARHR190420 Cardamine hirsuta HOM05D003919 ORTHO05D004906 9.1e-188 661.0 623 51.2
A03p46400 Brassica napus HOM05D003919 ORTHO05D004906 1.2e-187 660.6 623 51.0
Sp2g24010 Schrenkiella parvula HOM05D003919 ORTHO05D004906 2.0e-187 659.8 623 51.2
Eucgr.J00863 Eucalyptus grandis HOM05D003919 ORTHO05D004906 3.5e-187 659.1 622 51.0
DCAR_026901 Daucus carota HOM05D003919 ORTHO05D004906 1.0e-186 657.5 623 51.0
SGA_v2.0_scaffold17G08205 Striga asiatica HOM05D003919 ORTHO05D004906 1.0e-186 657.5 622 51.1
BraA03t13766Z Brassica rapa HOM05D003919 ORTHO05D004906 2.2e-186 656.4 622 50.8
Migut.J01108 Erythranthe guttata HOM05D003919 ORTHO05D004906 2.2e-186 656.4 623 50.4
Lj2g0026278 Lotus japonicus HOM05D003919 ORTHO05D004906 2.2e-186 656.4 623 51.2
AL6G34300 Arabidopsis lyrata HOM05D003919 ORTHO05D004906 2.9e-186 656.0 623 50.7
C07p44420 Brassica napus HOM05D003919 ORTHO05D004906 5.5e-185 651.7 623 50.9
BolC7t44964H Brassica oleracea HOM05D003919 ORTHO05D004906 9.4e-185 651.0 623 50.9
AT5G23110 Arabidopsis thaliana HOM05D003919 ORTHO05D004906 1.2e-184 650.6 623 50.9
ECA233G1217 Erigeron canadensis HOM05D003919 ORTHO05D004906 8.0e-184 647.9 622 51.8
AagrBONN_evm.TU.Sc2ySwM_344.4345 Anthoceros agrestis HOM05D003919 ORTHO05D004906 1.8e-183 646.7 623 51.0
CAN.G157.22 Capsicum annuum HOM05D003919 ORTHO05D004906 1.1e-182 644.0 622 50.5
AUR62017695 Chenopodium quinoa HOM05D003919 ORTHO05D004906 1.5e-182 643.7 623 50.6
Glyma.09G282200 Glycine max HOM05D003919 ORTHO05D004906 2.0e-182 643.3 623 51.0
Lsat_1_v5_gn_8_31660 Lactuca sativa HOM05D003919 ORTHO05D004906 2.0e-182 643.3 622 51.8
Sc06g0007940 Simmondsia chinensis HOM05D003919 ORTHO05D004906 1.7e-181 640.2 625 51.7
TPR.G8246 Trifolium pratense HOM05D003919 ORTHO05D004906 2.2e-181 639.8 624 50.8
Medtr1g037310 Medicago truncatula HOM05D003919 ORTHO05D004906 4.8e-181 638.6 624 50.5
Solyc02g014190.4 Solanum lycopersicum HOM05D003919 ORTHO05D004906 4.8e-181 638.6 620 50.5
AUR62015231 Chenopodium quinoa HOM05D003919 ORTHO05D004906 6.3e-181 638.3 622 50.3
Sopen02g003520 Solanum pennellii HOM05D003919 ORTHO05D004906 6.3e-181 638.3 620 50.3
Ah.01g012280 Amaranthus hybridus HOM05D003919 ORTHO05D004906 8.2e-181 637.9 623 49.9
HanXRQChr12g0366421 Helianthus annuus HOM05D003919 ORTHO05D004906 2.4e-180 636.3 622 51.0
Ca_25292_v3 Cicer arietinum L. HOM05D003919 ORTHO05D004906 1.6e-179 633.6 623 50.1
EL10Ac9g22945 Beta vulgaris HOM05D003919 ORTHO05D004906 1.0e-178 630.9 623 49.1
PGR044G0490 Punica granatum HOM05D003919 ORTHO05D004906 1.0e-178 630.9 619 49.3
arahy.Tifrunner.gnm1.ann1.FE7SUA Arachis hypogaea HOM05D003919 ORTHO05D004906 1.3e-178 630.6 619 50.2
Hund24370 Selenicereus undatus HOM05D003919 ORTHO05D004906 5.0e-178 628.6 624 49.5
Mapoly0175s0011 Marchantia polymorpha HOM05D003919 ORTHO05D004906 8.5e-178 627.9 622 50.2
Glyma.20G003400 Glycine max HOM05D003919 ORTHO05D004906 1.1e-177 627.5 623 49.4
Cpa.g.sc0.156 Carica papaya HOM05D003919 ORTHO05D004906 2.5e-177 626.3 592 52.0
Psat6g099280 Pisum sativum HOM05D003919 ORTHO05D004906 5.2e-175 618.6 624 50.0
Nitab4.5_0000405g0040 Nicotiana tabacum HOM05D003919 ORTHO05D004906 1.6e-171 607.1 584 50.9
Nitab4.5_0003853g0020 Nicotiana tabacum HOM05D003919 ORTHO05D004906 3.5e-171 605.9 584 50.3
Zm00001eb066370 Zea mays HOM05D003919 ORTHO05D004906 1.0e-170 604.4 621 48.8
Os04g0675101 Oryza sativa ssp. japonica HOM05D003919 ORTHO05D004906 3.8e-170 602.4 621 48.5
Lj6C719G10 Lonicera japonica HOM05D003919 ORTHO05D004906 8.3e-165 584.7 547 52.1
Pp3c9_15860 Physcomitrium patens HOM05D003919 ORTHO05D004906 1.2e-163 580.9 622 47.7
SMO164G0254 Selaginella moellendorffii HOM05D003919 ORTHO05D004906 3.0e-130 469.9 619 42.0
Oeu055859.1 Olea europaea HOM05D003919 ORTHO05D004906 3.5e-107 393.3 325 60.0
Lalb_Chr04g0258931 Lupinus albus HOM05D003919 ORTHO05D004906 1.3e-104 384.8 394 46.2
GSVIVG01012044001 Vitis vinifera HOM05D003919 ORTHO05D004906 2.0e-86 324.3 324 53.1
Dinv11717 Davidia involucrata HOM05D003919 ORTHO05D004906 4.2e-84 316.6 650 31.4
Lj6A719G43 Lonicera japonica HOM05D003919 ORTHO05D004906 2.4e-79 300.8 648 31.5
GSVIVG01014936001 Vitis vinifera HOM05D003919 ORTHO05D004906 4.2e-68 263.5 481 33.3
HPP92_012909 Vanilla planifolia HOM05D003919 ORTHO05D004906 2.0e-65 254.6 229 57.2
Cpa.g.sc0.155 Carica papaya HOM05D003919 ORTHO05D004906 8.0e-59 232.6 375 35.5
MCO02G364 Micromonas commoda HOM05D003919 ORTHO05D004906 1.9e-52 211.5 686 27.1
Gohir.A12G134001 Gossypium hirsutum HOM05D003919 ORTHO05D004906 2.0e-46 191.4 166 57.2
Psat4g123280 Pisum sativum HOM05D003919 ORTHO05D004906 2.5e-44 184.5 192 43.2
Phvul.003G005926 Phaseolus vulgaris HOM05D003919 ORTHO05D004906 4.9e-32 143.7 344 30.5
HPP92_012908 Vanilla planifolia HOM05D003919 ORTHO05D004906 9.5e-28 129.4 259 30.9
CiPaw.05G168800 Carya illinoinensis HOM05D003919 ORTHO05D004906 3.7e-24 117.5 274 28.8
Cre01.g044850 Chlamydomonas reinhardtii HOM05D003919 ORTHO05D004906 1.1e-23 115.9 480 24.8
HPP92_012876 Vanilla planifolia HOM05D003919 ORTHO05D004906 1.9e-23 115.2 306 28.1
CAN.G157.23 Capsicum annuum HOM05D003919 ORTHO05D004906 4.3e-20 104.0 268 31.0
Psat1g095160 Pisum sativum HOM05D003919 ORTHO05D004906 6.2e-19 100.1 149 36.9
FAN14G1298 Fragaria x ananassa HOM05D003919 ORTHO05D004906 4.0e-18 97.4 102 41.2
TAR374G1126 Trochodendron aralioides HOM05D003919 ORTHO05D036952 7.6e-17 93.2 134 38.1
CDE08G0032 Ceratophyllum demersum HOM05D003919 ORTHO05D004906 2.2e-16 91.7 249 26.9
Psat4g139360 Pisum sativum HOM05D007669 ORTHO05D009624 9.6e-12 76.3 80 43.8
FAN28G0606 Fragaria x ananassa HOM05D001114 ORTHO05D000940 1.1e-07 62.8 94 30.9
Solyc02g014180.2 Solanum lycopersicum HOM05D003919 ORTHO05D004906 1.2e-06 59.3 220 24.5
VMungo1383G1539 Vigna mungo HOM05D003919 ORTHO05D004906 6.0e-06 57.0 112 29.5


User provided reference genes

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