Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17904 Sequoiadendron giganteum HOM05D002031 ORTHO05D028523 4.8e-49 197.6 105 100.0
Nitab4.5_0001612g0100 Nicotiana tabacum HOM05D002031 ORTHO05D002143 2.2e-14 82.4 67 62.7
Nitab4.5_0004166g0050 Nicotiana tabacum HOM05D002031 ORTHO05D002143 2.2e-14 82.4 67 62.7
MBI02_g12197_MAGBIO Magnolia biondii HOM05D002031 ORTHO05D002143 3.8e-14 81.6 73 56.2
Prupe.4G144300 Prunus persica HOM05D002031 ORTHO05D002143 6.5e-14 80.9 67 59.7
ATR1098G041 Amborella trichopoda HOM05D002031 ORTHO05D002143 8.5e-14 80.5 67 59.7
Nn3g20354 Nelumbo nucifera HOM05D002031 ORTHO05D002143 1.1e-13 80.1 67 61.2
Dinv26637 Davidia involucrata HOM05D002031 ORTHO05D002143 1.5e-13 79.7 71 59.2
Lj3g0011562 Lotus japonicus HOM05D002031 ORTHO05D002143 1.5e-13 79.7 73 54.8
CSS0037066 Camellia sinensis var. sinensis HOM05D002031 ORTHO05D002143 3.2e-13 78.6 73 56.2
Dinv21344 Davidia involucrata HOM05D002031 ORTHO05D002143 4.2e-13 78.2 73 56.2
Phvul.005G054600 Phaseolus vulgaris HOM05D002031 ORTHO05D002143 4.2e-13 78.2 69 58.0
THA.LOC104812285 Tarenaya hassleriana HOM05D002031 ORTHO05D002143 4.2e-13 78.2 73 56.2
VMungo1080G0437 Vigna mungo HOM05D002031 ORTHO05D002143 4.2e-13 78.2 69 58.0
Sabra11G0126200 Salix brachista HOM05D002031 ORTHO05D002143 5.5e-13 77.8 67 58.2
Nn4g26631 Nelumbo nucifera HOM05D002031 ORTHO05D002143 7.2e-13 77.4 67 56.7
CSS0037709 Camellia sinensis var. sinensis HOM05D002031 ORTHO05D002143 9.5e-13 77.0 73 56.2
PGSC0003DMG400031088 Solanum tuberosum HOM05D002031 ORTHO05D002143 9.5e-13 77.0 63 63.5
arahy.Tifrunner.gnm1.ann1.PV2JBQ Arachis hypogaea HOM05D002031 ORTHO05D002143 1.2e-12 76.6 70 57.1
Glyma.15G253000 Glycine max HOM05D002031 ORTHO05D002143 1.2e-12 76.6 67 58.2
Cc05_g10020 Coffea canephora HOM05D002031 ORTHO05D002143 1.6e-12 76.3 73 54.8
CAN.G585.3 Capsicum annuum HOM05D002031 ORTHO05D002143 2.1e-12 75.9 63 63.5
Cpa.g.sc229.4 Carica papaya HOM05D002031 ORTHO05D002143 2.1e-12 75.9 70 55.7
CsaV3_4G037980 Cucumis sativus L. HOM05D002031 ORTHO05D002143 2.1e-12 75.9 73 50.7
Thhalv10006681m.g Eutrema salsugineum HOM05D002031 ORTHO05D002143 2.1e-12 75.9 67 58.2
Manes.15G101300 Manihot esculenta HOM05D002031 ORTHO05D002143 2.1e-12 75.9 67 56.7
Sp1g15360 Schrenkiella parvula HOM05D002031 ORTHO05D002143 2.1e-12 75.9 67 58.2
Zm00001eb286620 Zea mays HOM05D002031 ORTHO05D002143 2.1e-12 75.9 73 54.8
Aa31LG4G2620 Aethionema arabicum HOM05D002031 ORTHO05D002143 2.7e-12 75.5 67 58.2
Medtr2g064840 Medicago truncatula HOM05D002031 ORTHO05D002143 2.7e-12 75.5 63 58.7
Solyc07g056020.3 Solanum lycopersicum HOM05D002031 ORTHO05D002143 2.7e-12 75.5 63 61.9
Sopen07g029370 Solanum pennellii HOM05D002031 ORTHO05D002143 2.7e-12 75.5 63 61.9
Cfa019443 Carpinus fangiana HOM05D002031 ORTHO05D002143 3.6e-12 75.1 71 50.7
Ca_03484_v3 Cicer arietinum L. HOM05D002031 ORTHO05D002143 3.6e-12 75.1 63 58.7
DCAR_017559 Daucus carota HOM05D002031 ORTHO05D002143 3.6e-12 75.1 71 53.5
Glyma.08G174200 Glycine max HOM05D002031 ORTHO05D002143 3.6e-12 75.1 67 56.7
Oeu012709.1 Olea europaea HOM05D002031 ORTHO05D002143 3.6e-12 75.1 67 55.2
Peaxi162Scf00111g00527 Petunia axillaris HOM05D002031 ORTHO05D002143 3.6e-12 75.1 67 58.2
Potri.011G140100 Populus trichocarpa HOM05D002031 ORTHO05D002143 3.6e-12 75.1 69 55.1
MSTRG.14998 Avicennia marina HOM05D002031 ORTHO05D002143 4.7e-12 74.7 67 56.7
FvH4_3g16100 Fragaria vesca HOM05D002031 ORTHO05D002143 4.7e-12 74.7 65 56.9
FAN11G0136 Fragaria x ananassa HOM05D002031 ORTHO05D002143 4.7e-12 74.7 65 56.9
FAN21G3742 Fragaria x ananassa HOM05D002031 ORTHO05D002143 4.7e-12 74.7 65 56.9
Gohir.A01G095300 Gossypium hirsutum HOM05D002031 ORTHO05D002143 4.7e-12 74.7 67 56.7
RcHm_v2.0_Chr5g0027081 Rosa chinensis HOM05D002031 ORTHO05D002143 4.7e-12 74.7 65 56.9
BcaB03g13012 Brassica carinata HOM05D002031 ORTHO05D002143 6.1e-12 74.3 69 56.5
ClCG11G016260 Citrullus lanatus HOM05D002031 ORTHO05D002143 6.1e-12 74.3 70 48.6
ECA236G1750 Erigeron canadensis HOM05D002031 ORTHO05D002143 6.1e-12 74.3 73 52.1
FAN25G2027 Fragaria x ananassa HOM05D002031 ORTHO05D002143 6.1e-12 74.3 65 55.4
A08p31030 Brassica napus HOM05D002031 ORTHO05D002143 8.0e-12 73.9 67 56.7
C08p17770 Brassica napus HOM05D002031 ORTHO05D002143 8.0e-12 73.9 67 56.7
BolC8t49403H Brassica oleracea HOM05D002031 ORTHO05D002143 8.0e-12 73.9 67 56.7
BraA08t35032Z Brassica rapa HOM05D002031 ORTHO05D002143 8.0e-12 73.9 67 56.7
Eucgr.F01432 Eucalyptus grandis HOM05D002031 ORTHO05D002143 8.0e-12 73.9 73 52.1
Gohir.D01G079500 Gossypium hirsutum HOM05D002031 ORTHO05D002143 8.0e-12 73.9 67 56.7
Potri.001G436300 Populus trichocarpa HOM05D002031 ORTHO05D002143 8.0e-12 73.9 64 57.8
Rhsim06G0183300 Rhododendron simsii HOM05D002031 ORTHO05D002143 8.0e-12 73.9 65 60.0
TPR.G27161 Trifolium pratense HOM05D002031 ORTHO05D002143 8.0e-12 73.9 63 57.1
Eucgr.F01437 Eucalyptus grandis HOM05D002031 ORTHO05D002143 1.0e-11 73.6 73 52.1
Psat1g009920 Pisum sativum HOM05D002031 ORTHO05D002143 1.0e-11 73.6 63 55.6
AL1G29460 Arabidopsis lyrata HOM05D002031 ORTHO05D002143 1.4e-11 73.2 64 57.8
AT1G17220 Arabidopsis thaliana HOM05D002031 ORTHO05D002143 1.4e-11 73.2 64 57.8
arahy.Tifrunner.gnm1.ann1.HGAE8N Arachis hypogaea HOM05D002031 ORTHO05D002143 1.4e-11 73.2 68 57.4
PSO675G7806 Papaver somniferum HOM05D002031 ORTHO05D002143 1.4e-11 73.2 63 54.0
Thecc.07G159700 Theobroma cacao HOM05D002031 ORTHO05D002143 1.4e-11 73.2 67 53.7
FAN16G0016 Fragaria x ananassa HOM05D002031 ORTHO05D002143 1.8e-11 72.8 65 55.4
HanXRQChr11g0330011 Helianthus annuus HOM05D002031 ORTHO05D002143 1.8e-11 72.8 67 52.2
HanXRQChr15g0492361 Helianthus annuus HOM05D002031 ORTHO05D002143 1.8e-11 72.8 67 53.7
PSO541G0296 Papaver somniferum HOM05D002031 ORTHO05D002143 1.8e-11 72.8 63 54.0
Sabra16G0291600 Salix brachista HOM05D002031 ORTHO05D002143 1.8e-11 72.8 63 57.1
TAR624G1050 Trochodendron aralioides HOM05D002031 ORTHO05D002143 1.8e-11 72.8 64 57.8
CSS0015742 Camellia sinensis var. sinensis HOM05D002031 ORTHO05D002143 2.3e-11 72.4 67 55.2
Gorai.002G104300 Gossypium raimondii HOM05D002031 ORTHO05D002143 2.3e-11 72.4 67 55.2
Sed0013452 Sechium edule HOM05D002031 ORTHO05D002143 2.3e-11 72.4 67 49.3
GSVIVG01020495001 Vitis vinifera HOM05D002031 ORTHO05D002143 2.3e-11 72.4 71 47.9
CDE03G0137 Ceratophyllum demersum HOM05D002031 ORTHO05D002143 3.0e-11 72.0 82 48.8
BcaC07g38837 Brassica carinata HOM05D002031 ORTHO05D002143 4.0e-11 71.6 67 55.2
Carub.0001s1697 Capsella rubella HOM05D002031 ORTHO05D002143 4.0e-11 71.6 64 56.2
Gorai.009G336800 Gossypium raimondii HOM05D002031 ORTHO05D028523 4.0e-11 71.6 67 55.2
MD05G1213700 Malus domestica HOM05D002031 ORTHO05D002143 4.0e-11 71.6 63 55.6
Sabra16G0290500 Salix brachista HOM05D002031 ORTHO05D002143 4.0e-11 71.6 63 57.1
BcaB07g34040 Brassica carinata HOM05D002031 ORTHO05D002143 5.2e-11 71.2 64 56.2
CiPaw.12G007300 Carya illinoinensis HOM05D002031 ORTHO05D002143 5.2e-11 71.2 64 50.0
Ciclev10018663m.g Citrus clementina HOM05D002031 ORTHO05D002143 5.2e-11 71.2 67 52.2
MELO3C010552.2 Cucumis melo HOM05D002031 ORTHO05D002143 5.2e-11 71.2 81 43.2
Duzib213G0092 Durio zibethinus HOM05D002031 ORTHO05D002143 5.2e-11 71.2 73 53.4
Lj1A805T79 Lonicera japonica HOM05D002031 ORTHO05D002143 5.2e-11 71.2 70 51.4
Lalb_Chr01g0015981 Lupinus albus HOM05D002031 ORTHO05D002143 5.2e-11 71.2 63 55.6
Manes.03G090800 Manihot esculenta HOM05D002031 ORTHO05D002143 5.2e-11 71.2 67 53.7
QL04p073107 Quercus lobata HOM05D002031 ORTHO05D002143 5.2e-11 71.2 65 50.8
Actinidia35185 Actinidia chinensis HOM05D002031 ORTHO05D002143 6.8e-11 70.9 73 52.1
Aa31LG7G2030 Aethionema arabicum HOM05D002031 ORTHO05D002143 6.8e-11 70.9 65 53.8
MSTRG.12855 Avicennia marina HOM05D002031 ORTHO05D002143 6.8e-11 70.9 59 57.6
CARHR017810 Cardamine hirsuta HOM05D002031 ORTHO05D028523 6.8e-11 70.9 64 53.1
SGA_v2.0_scaffold73G24366 Striga asiatica HOM05D002031 ORTHO05D002143 6.8e-11 70.9 67 52.2
Lsat_1_v5_gn_7_99460 Lactuca sativa HOM05D002031 ORTHO05D002143 8.8e-11 70.5 73 49.3
Lalb_Chr25g0285241 Lupinus albus HOM05D002031 ORTHO05D002143 8.8e-11 70.5 65 53.8
MD10G1197600 Malus domestica HOM05D002031 ORTHO05D002143 8.8e-11 70.5 63 54.0
SalBow7G1750 Salvia bowleyana HOM05D002031 ORTHO05D002143 8.8e-11 70.5 67 53.7
SalBow8G4653 Salvia bowleyana HOM05D002031 ORTHO05D002143 8.8e-11 70.5 67 53.7
HPP92_016575 Vanilla planifolia HOM05D002031 ORTHO05D002143 8.8e-11 70.5 70 51.4
TAR636G1001 Trochodendron aralioides HOM05D002031 ORTHO05D002143 1.2e-10 70.1 73 53.4
BcaC05g25655 Brassica carinata HOM05D002031 ORTHO05D002143 1.5e-10 69.7 64 54.7
A06p13140 Brassica napus HOM05D002031 ORTHO05D002143 1.5e-10 69.7 64 54.7
C05p15640 Brassica napus HOM05D002031 ORTHO05D002143 1.5e-10 69.7 64 54.7
BolC5t30271H Brassica oleracea HOM05D002031 ORTHO05D002143 1.5e-10 69.7 64 54.7
BraA06t24472Z Brassica rapa HOM05D002031 ORTHO05D002143 1.5e-10 69.7 64 54.7
PGR031G0914 Punica granatum HOM05D002031 ORTHO05D002143 1.5e-10 69.7 73 50.7
vmacro12030 Vaccinium macrocarpon HOM05D002031 ORTHO05D002143 1.5e-10 69.7 60 58.3
Ah.04g163360 Amaranthus hybridus HOM05D002031 ORTHO05D002143 2.0e-10 69.3 64 54.7
Aqoxy1G01663 Aquilegia oxysepala HOM05D002031 ORTHO05D002143 2.0e-10 69.3 65 52.3
CANSAT56G3161 Cannabis sativa HOM05D002031 ORTHO05D002143 2.6e-10 68.9 59 55.9
CDE06G2115 Ceratophyllum demersum HOM05D002031 ORTHO05D002143 2.6e-10 68.9 82 47.6
Migut.H02058 Erythranthe guttata HOM05D002031 ORTHO05D002143 2.6e-10 68.9 59 55.9
vmacro09449 Vaccinium macrocarpon HOM05D002031 ORTHO05D002143 2.6e-10 68.9 65 52.3
Gohir.D04G140701 Gossypium hirsutum HOM05D002031 ORTHO05D028523 3.4e-10 68.6 67 50.7
EL10Ac4g08531 Beta vulgaris HOM05D002031 ORTHO05D002143 4.4e-10 68.2 64 53.1
Migut.M00670 Erythranthe guttata HOM05D002031 ORTHO05D002143 4.4e-10 68.2 69 50.7
DCAR_013807 Daucus carota HOM05D002031 ORTHO05D002143 9.8e-10 67.0 65 49.2
unitig_747.g21595 Utricularia gibba HOM05D002031 ORTHO05D002143 9.8e-10 67.0 59 54.2
HPP92_011058 Vanilla planifolia HOM05D002031 ORTHO05D002143 9.8e-10 67.0 65 52.3
Actinidia20593 Actinidia chinensis HOM05D002031 ORTHO05D002143 1.3e-09 66.6 73 52.1
COL.COLO4_38377 Corchorus olitorius HOM05D002031 ORTHO05D002143 1.3e-09 66.6 81 46.9
Actinidia12334 Actinidia chinensis HOM05D002031 ORTHO05D002143 2.2e-09 65.9 66 53.0
TWI38G0655 Tripterygium wilfordii HOM05D002031 ORTHO05D002143 2.2e-09 65.9 59 54.2
Rhsim04G0032300 Rhododendron simsii HOM05D002031 ORTHO05D002143 2.8e-09 65.5 52 57.7
TWI38G0855 Tripterygium wilfordii HOM05D002031 ORTHO05D002143 2.8e-09 65.5 59 54.2
Hund02299 Selenicereus undatus HOM05D002031 ORTHO05D002143 1.8e-08 62.8 65 46.2
SalBow7G1447 Salvia bowleyana HOM05D002031 ORTHO05D002143 3.1e-08 62.0 52 55.8
SalBow7G2823 Salvia bowleyana HOM05D002031 ORTHO05D002143 3.1e-08 62.0 52 55.8
Pp3c1_24000 Physcomitrium patens HOM05D002031 ORTHO05D002143 7.0e-08 60.8 65 52.3
SMO147G0028 Selaginella moellendorffii HOM05D002031 ORTHO05D002143 9.2e-08 60.5 50 56.0
AUR62041928 Chenopodium quinoa HOM05D002031 ORTHO05D002143 1.2e-07 60.1 64 46.9
AUR62041255 Chenopodium quinoa HOM05D002031 ORTHO05D002143 2.0e-07 59.3 64 46.9
CBR_g39246 Chara braunii HOM05D002031 ORTHO05D002143 3.8e-06 55.1 75 40.0


User provided reference genes

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