Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17885 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 1.0e-128 463.4 226 100.0
SEGI_01851 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 7.1e-66 254.6 220 64.5
SEGI_16662 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 4.6e-57 225.3 130 87.7
SEGI_27460 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 4.5e-52 208.8 117 85.5
SEGI_13974 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 6.5e-51 204.9 121 80.2
SEGI_41142 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 1.1e-50 204.1 117 83.8
SEGI_38571 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 6.7e-48 194.9 117 81.2
SEGI_01098 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 1.5e-47 193.7 123 80.5
SEGI_30327 Sequoiadendron giganteum HOM05D000014 ORTHO05D010678 1.9e-47 193.4 117 78.6
SEGI_33186 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 1.9e-47 193.4 122 79.5
SEGI_13674 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 9.7e-47 191.0 115 81.7
SEGI_26019 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 4.1e-45 185.7 118 77.1
SEGI_21836 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 1.4e-42 177.2 107 82.2
SEGI_23161 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 6.1e-41 171.8 98 83.7
SEGI_03317 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 1.8e-37 160.2 98 78.6
SEGI_19803 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 1.8e-37 160.2 98 78.6
SEGI_21629 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 1.8e-37 160.2 98 78.6
SEGI_08049 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 7.7e-36 154.8 90 85.6
SEGI_04958 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 1.4e-34 150.6 98 74.5
SEGI_09679 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 8.8e-32 141.4 77 89.6
SEGI_09187 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 7.0e-29 131.7 96 71.9
SEGI_08740 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 1.9e-26 123.6 72 81.9
Cpa.g.sc11.109 Carica papaya HOM05D008768 ORTHO05D010678 2.1e-25 120.2 112 53.6
SEGI_21109 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 1.0e-24 117.9 77 76.6
PSO339G5874 Papaver somniferum HOM05D008768 ORTHO05D010678 3.0e-24 116.3 114 50.9
SEGI_04800 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 4.0e-24 115.9 77 76.6
FvH4_6g15232 Fragaria vesca HOM05D000004 ORTHO05D010678 1.1e-23 114.4 118 46.6
COL.COLO4_05313 Corchorus olitorius HOM05D008768 ORTHO05D010678 2.0e-23 113.6 113 52.2
COL.COLO4_05809 Corchorus olitorius HOM05D000004 ORTHO05D010678 5.7e-23 112.1 111 49.5
COL.COLO4_37517 Corchorus olitorius HOM05D000004 ORTHO05D010678 1.7e-22 110.5 113 51.3
PSO675G4837 Papaver somniferum HOM05D008768 ORTHO05D010678 9.1e-21 104.8 112 48.2
SEGI_36227 Sequoiadendron giganteum HOM05D000004 ORTHO05D010678 1.6e-20 104.0 62 83.9
PSO063G2130 Papaver somniferum HOM05D008768 ORTHO05D010678 3.5e-20 102.8 113 51.3
SEGI_19694 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 3.8e-19 99.4 52 86.5
PSO478G5265 Papaver somniferum HOM05D008768 ORTHO05D010678 5.0e-19 99.0 112 46.4
FvH4_2g03391 Fragaria vesca HOM05D000004 ORTHO05D000002 2.7e-17 93.2 68 63.2
FvH4_1g29761 Fragaria vesca HOM05D000004 ORTHO05D000002 3.0e-16 89.7 68 61.8
FvH4_3g31261 Fragaria vesca HOM05D000004 ORTHO05D000002 5.2e-16 89.0 58 67.2
SEGI_39688 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 3.4e-15 86.3 96 45.8
PSO210G1913 Papaver somniferum HOM05D000004 ORTHO05D000002 4.8e-14 82.4 69 55.1
Cpa.g.sc28.67 Carica papaya HOM05D008768 ORTHO05D010678 5.4e-13 79.0 75 54.7
RcHm_v2.0_Chr3g0497281 Rosa chinensis HOM05D028557 ORTHO05D010678 2.0e-12 77.0 92 46.7
SEGI_03825 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 2.7e-12 76.6 122 34.4
SEGI_38816 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 1.3e-11 74.3 112 37.5
SEGI_33929 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 3.8e-11 72.8 37 86.5
SEGI_11744 Sequoiadendron giganteum HOM05D000070 ORTHO05D000722 2.3e-08 63.5 39 76.9
PSO782G5166 Papaver somniferum HOM05D000004 ORTHO05D037281 4.0e-08 62.8 38 68.4
Sopen07g012430 Solanum pennellii HOM05D000004 ORTHO05D002324 4.4e-07 59.3 147 30.6
ECA234G2929 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.5e-07 58.5 115 33.0
RcHm_v2.0_Chr5g0015161 Rosa chinensis HOM05D000004 ORTHO05D000002 7.5e-07 58.5 97 38.1
Sopen02g010430 Solanum pennellii HOM05D000004 ORTHO05D000002 7.5e-07 58.5 122 35.2
QL03p069728 Quercus lobata HOM05D000004 ORTHO05D000002 9.8e-07 58.2 127 29.1
QL05p061522 Quercus lobata HOM05D000004 ORTHO05D000002 9.8e-07 58.2 127 31.5
QL09p002786 Quercus lobata HOM05D000004 ORTHO05D000002 9.8e-07 58.2 127 29.1
SEGI_33153 Sequoiadendron giganteum HOM05D008768 ORTHO05D010678 1.7e-06 57.4 87 35.6
Sopen00g003980 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-06 57.4 122 35.2
Sopen05g011380 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-06 57.4 122 34.4
QL04p063674 Quercus lobata HOM05D000004 ORTHO05D000002 2.2e-06 57.0 127 32.3
Sopen02g031840 Solanum pennellii HOM05D000004 ORTHO05D002360 2.2e-06 57.0 122 35.2
Sopen05g019690 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-06 57.0 122 35.2
Sopen05g023200 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-06 57.0 122 35.2
Sopen06g021530 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-06 57.0 122 35.2
Sopen07g015680 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-06 57.0 122 36.1
Sopen08g008290 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-06 57.0 122 35.2
Sopen11g025830 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-06 57.0 122 35.2
Sopen12g027410 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-06 57.0 122 34.4
Sopen05g023490 Solanum pennellii HOM05D000004 ORTHO05D000002 2.8e-06 56.6 122 36.1
Sopen05g026240 Solanum pennellii HOM05D000004 ORTHO05D000002 2.8e-06 56.6 122 35.2
TWI34G1848 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.8e-06 56.6 122 32.8
Sopen00g004750 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-06 56.2 122 35.2
Sopen01g025560 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-06 56.2 122 34.4
Sopen05g005990 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-06 56.2 122 34.4
Sopen05g009650 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-06 56.2 122 35.2
Sopen06g009810 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-06 56.2 122 34.4
Sopen09g030490 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-06 56.2 122 34.4
Sopen12g029860 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-06 56.2 122 34.4
Sopen06g007050 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-06 55.8 125 34.4
CANSAT35G1243 Cannabis sativa HOM05D000004 ORTHO05D000002 6.3e-06 55.5 142 31.7
Sopen01g008780 Solanum pennellii HOM05D000004 ORTHO05D000002 6.3e-06 55.5 111 35.1
Sopen03g025930 Solanum pennellii HOM05D000004 ORTHO05D000002 6.3e-06 55.5 122 35.2
Sopen08g012830 Solanum pennellii HOM05D000004 ORTHO05D000002 6.3e-06 55.5 122 34.4
Sopen09g010120 Solanum pennellii HOM05D000004 ORTHO05D000002 6.3e-06 55.5 122 35.2
Sopen12g024660 Solanum pennellii HOM05D000004 ORTHO05D000002 6.3e-06 55.5 125 33.6
TWI63G0248 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.3e-06 55.5 113 32.7
CSS0039307 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.3e-06 55.1 123 35.8
CANSAT01G1054 Cannabis sativa HOM05D000004 ORTHO05D000002 8.3e-06 55.1 142 29.6
Sopen05g008330 Solanum pennellii HOM05D000004 ORTHO05D000002 8.3e-06 55.1 122 34.4


User provided reference genes

Program Settings