Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17033 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 9.8e-191 669.8 313 100.0
ATR0022G001 Amborella trichopoda HOM05D004653 ORTHO05D006221 3.8e-94 349.0 214 71.5
Thecc.08G066400 Theobroma cacao HOM05D004653 ORTHO05D006221 4.0e-91 339.0 214 71.0
CSS0007986 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 5.2e-91 338.6 221 68.3
MELO3C003541.2 Cucumis melo HOM05D004653 ORTHO05D006221 1.2e-90 337.4 261 60.5
Oeu018527.2 Olea europaea HOM05D004653 ORTHO05D006221 1.5e-90 337.0 222 68.5
Ciclev10000790m.g Citrus clementina HOM05D004653 ORTHO05D006221 4.4e-90 335.5 214 70.6
COL.COLO4_11961 Corchorus olitorius HOM05D004653 ORTHO05D006221 4.4e-90 335.5 214 69.6
ClCG11G014410 Citrullus lanatus HOM05D004653 ORTHO05D006221 1.7e-89 333.6 260 59.6
TAR376G1013 Trochodendron aralioides HOM05D004653 ORTHO05D006221 1.7e-89 333.6 214 70.1
CSS0025013 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 2.8e-89 332.8 214 69.6
arahy.Tifrunner.gnm1.ann1.QAT0QL Arachis hypogaea HOM05D004653 ORTHO05D006221 6.3e-89 331.6 214 68.7
Dinv44830 Davidia involucrata HOM05D004653 ORTHO05D006221 6.3e-89 331.6 214 69.6
Gohir.D05G267700 Gossypium hirsutum HOM05D004653 ORTHO05D006221 6.3e-89 331.6 259 59.5
CSS0037453 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 8.3e-89 331.3 214 69.2
Gorai.009G279800 Gossypium raimondii HOM05D004653 ORTHO05D006221 2.4e-88 329.7 214 68.2
MBI06_g18790_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 2.4e-88 329.7 214 69.2
CANSAT11G2183 Cannabis sativa HOM05D004653 ORTHO05D006221 3.1e-88 329.3 214 68.7
CsaV3_3G047810 Cucumis sativus L. HOM05D004653 ORTHO05D006221 3.1e-88 329.3 260 59.6
PSO541G1602 Papaver somniferum HOM05D004653 ORTHO05D006221 3.1e-88 329.3 214 69.2
TWI56G0982 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 3.1e-88 329.3 214 70.1
Migut.I00061 Erythranthe guttata HOM05D004653 ORTHO05D006221 5.4e-88 328.6 214 69.2
VMungo1309G1466 Vigna mungo HOM05D004653 ORTHO05D006221 5.4e-88 328.6 213 70.0
Lj1g0013887 Lotus japonicus HOM05D004653 ORTHO05D006221 7.0e-88 328.2 214 67.3
Potri.002G102600 Populus trichocarpa HOM05D004653 ORTHO05D006221 7.0e-88 328.2 214 68.2
GSVIVG01009125001 Vitis vinifera HOM05D004653 ORTHO05D006221 1.2e-87 327.4 214 67.8
Haze_22352 Corylus avellana HOM05D004653 ORTHO05D006221 1.6e-87 327.0 241 63.5
SalBow5G1317 Salvia bowleyana HOM05D004653 ORTHO05D006221 1.6e-87 327.0 214 67.8
Sed0021217 Sechium edule HOM05D004653 ORTHO05D006221 3.5e-87 325.9 260 58.5
MSTRG.23086 Avicennia marina HOM05D004653 ORTHO05D006221 4.5e-87 325.5 214 67.8
Ciclev10001057m.g Citrus clementina HOM05D004653 ORTHO05D006221 4.5e-87 325.5 214 68.7
PSO675G8871 Papaver somniferum HOM05D004653 ORTHO05D006221 4.5e-87 325.5 214 68.7
Ca_15984_v3 Cicer arietinum L. HOM05D004653 ORTHO05D006221 5.9e-87 325.1 214 67.3
Manes.02G147500 Manihot esculenta HOM05D004653 ORTHO05D006221 5.9e-87 325.1 214 67.8
SGA_v2.0_scaffold25G10868 Striga asiatica HOM05D004653 ORTHO05D006221 1.0e-86 324.3 215 67.9
TPR.G26053 Trifolium pratense HOM05D004653 ORTHO05D006221 1.3e-86 323.9 215 67.0
Cfa013708 Carpinus fangiana HOM05D004653 ORTHO05D006221 1.7e-86 323.6 214 68.2
CiPaw.07G169200 Carya illinoinensis HOM05D004653 ORTHO05D006221 1.7e-86 323.6 214 68.2
Prupe.1G526800 Prunus persica HOM05D004653 ORTHO05D006221 1.7e-86 323.6 214 69.2
Os10g0377800 Oryza sativa ssp. japonica HOM05D004653 ORTHO05D006221 2.3e-86 323.2 214 68.2
TWI36G0595 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 2.9e-86 322.8 214 68.7
Lalb_Chr23g0270281 Lupinus albus HOM05D004653 ORTHO05D006221 3.8e-86 322.4 214 67.3
QL09p016947 Quercus lobata HOM05D004653 ORTHO05D006221 3.8e-86 322.4 214 67.3
Cpa.g.sc36.204 Carica papaya HOM05D004653 ORTHO05D006221 5.0e-86 322.0 214 67.8
Glyma.04G093600 Glycine max HOM05D004653 ORTHO05D006221 5.0e-86 322.0 215 68.8
Phvul.009G037700 Phaseolus vulgaris HOM05D004653 ORTHO05D006221 6.6e-86 321.6 214 68.2
MD15G1380600 Malus domestica HOM05D004653 ORTHO05D006221 8.6e-86 321.2 214 69.2
Atru.chr13.1058 Acer truncatum HOM05D004653 ORTHO05D006221 1.1e-85 320.9 214 68.2
Aqoxy6G01474 Aquilegia oxysepala HOM05D004653 ORTHO05D006221 1.1e-85 320.9 214 66.8
Actinidia30803 Actinidia chinensis HOM05D004653 ORTHO05D006221 1.5e-85 320.5 214 67.3
Manes.18G062000 Manihot esculenta HOM05D004653 ORTHO05D006221 1.5e-85 320.5 214 67.8
Psat5g045400 Pisum sativum HOM05D004653 ORTHO05D006221 1.5e-85 320.5 214 65.9
FAN08G1395 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.9e-85 320.1 214 68.2
Lalb_Chr11g0065151 Lupinus albus HOM05D004653 ORTHO05D006221 1.9e-85 320.1 215 67.4
MD08G1191800 Malus domestica HOM05D004653 ORTHO05D006221 1.9e-85 320.1 214 68.7
Medtr3g100890 Medicago truncatula HOM05D004653 ORTHO05D006221 1.9e-85 320.1 215 66.0
RcHm_v2.0_Chr7g0237681 Rosa chinensis HOM05D004653 ORTHO05D006221 1.9e-85 320.1 214 68.7
FvH4_5g35940 Fragaria vesca HOM05D004653 ORTHO05D006221 2.5e-85 319.7 214 68.2
FAN18G1441 Fragaria x ananassa HOM05D004653 ORTHO05D006221 2.5e-85 319.7 214 68.2
Lj4C92G16 Lonicera japonica HOM05D004653 ORTHO05D006221 3.3e-85 319.3 214 66.8
Hma1.2p1_0961F.1_g241730 Hydrangea macrophylla HOM05D004653 ORTHO05D006221 4.3e-85 318.9 214 67.3
AL8G23940 Arabidopsis lyrata HOM05D004653 ORTHO05D006221 7.3e-85 318.2 214 65.9
AT5G49970 Arabidopsis thaliana HOM05D004653 ORTHO05D006221 7.3e-85 318.2 214 65.9
Cc04_g13590 Coffea canephora HOM05D004653 ORTHO05D006221 7.3e-85 318.2 214 66.8
FAN04G0673 Fragaria x ananassa HOM05D004653 ORTHO05D006221 7.3e-85 318.2 214 67.8
Nn1g05497 Nelumbo nucifera HOM05D004653 ORTHO05D006221 7.3e-85 318.2 214 68.7
vmacro22331 Vaccinium macrocarpon HOM05D004653 ORTHO05D006221 9.5e-85 317.8 213 68.1
Sc01g0000970 Simmondsia chinensis HOM05D004653 ORTHO05D006221 1.6e-84 317.0 214 67.3
Solyc03g113780.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 2.1e-84 316.6 214 65.0
THA.LOC104799811 Tarenaya hassleriana HOM05D004653 ORTHO05D006221 2.1e-84 316.6 214 66.8
TAR628G1442 Trochodendron aralioides HOM05D004653 ORTHO05D006221 2.1e-84 316.6 214 66.8
Sp6g11760 Schrenkiella parvula HOM05D004653 ORTHO05D006221 2.8e-84 316.2 214 65.4
PGSC0003DMG401024581 Solanum tuberosum HOM05D004653 ORTHO05D006221 3.6e-84 315.8 214 65.0
EL10Ac1g01097 Beta vulgaris HOM05D004653 ORTHO05D006221 4.7e-84 315.5 214 66.8
FAN13G0646 Fragaria x ananassa HOM05D004653 ORTHO05D006221 8.0e-84 314.7 216 67.1
Peaxi162Scf00017g00233 Petunia axillaris HOM05D004653 ORTHO05D006221 1.8e-83 313.5 221 63.3
Sopen03g032830 Solanum pennellii HOM05D004653 ORTHO05D006221 1.8e-83 313.5 214 64.5
CARHR258740 Cardamine hirsuta HOM05D004653 ORTHO05D006221 2.3e-83 313.2 214 65.9
Thhalv10013217m.g Eutrema salsugineum HOM05D004653 ORTHO05D006221 3.1e-83 312.8 214 65.0
Mapoly0107s0030 Marchantia polymorpha HOM05D004653 ORTHO05D006221 3.1e-83 312.8 213 67.1
Hund26999 Selenicereus undatus HOM05D004653 ORTHO05D006221 4.0e-83 312.4 214 66.4
HanXRQChr02g0047071 Helianthus annuus HOM05D004653 ORTHO05D006221 5.2e-83 312.0 214 65.4
unitig_26.g9628 Utricularia gibba HOM05D004653 ORTHO05D006221 5.2e-83 312.0 214 64.0
BcaC01g04840 Brassica carinata HOM05D004653 ORTHO05D006221 6.8e-83 311.6 214 64.5
Carub.0008s0987 Capsella rubella HOM05D004653 ORTHO05D006221 6.8e-83 311.6 214 65.0
AUR62019003 Chenopodium quinoa HOM05D004653 ORTHO05D006221 1.2e-82 310.8 213 65.7
AUR62027845 Chenopodium quinoa HOM05D004653 ORTHO05D006221 1.2e-82 310.8 213 65.7
C03p33300 Brassica napus HOM05D004653 ORTHO05D006221 1.5e-82 310.5 214 64.0
BolC3t15652H Brassica oleracea HOM05D004653 ORTHO05D006221 1.5e-82 310.5 214 64.0
CAN.G853.18 Capsicum annuum HOM05D004653 ORTHO05D006221 2.0e-82 310.1 214 63.1
A03p27590 Brassica napus HOM05D004653 ORTHO05D006221 4.4e-82 308.9 214 64.0
DCAR_012873 Daucus carota HOM05D004653 ORTHO05D006221 5.8e-82 308.5 214 66.4
Lsat_1_v5_gn_1_2401 Lactuca sativa HOM05D004653 ORTHO05D006221 5.8e-82 308.5 214 64.5
CDE05G0914 Ceratophyllum demersum HOM05D004653 ORTHO05D006221 7.5e-82 308.1 217 66.4
Eucgr.F02123 Eucalyptus grandis HOM05D004653 ORTHO05D006221 9.8e-82 307.8 214 64.5
BcaB01g02929 Brassica carinata HOM05D004653 ORTHO05D006221 1.3e-81 307.4 214 64.0
ECA247G2604 Erigeron canadensis HOM05D004653 ORTHO05D006221 1.3e-81 307.4 214 65.9
BraA03t11972Z Brassica rapa HOM05D004653 ORTHO05D006221 2.2e-81 306.6 214 63.6
SMO356G0546 Selaginella moellendorffii HOM05D004653 ORTHO05D006221 4.9e-81 305.4 214 66.4
Aa31sc34G110 Aethionema arabicum HOM05D004653 ORTHO05D006221 6.4e-81 305.1 214 63.1
Sc01g0000980 Simmondsia chinensis HOM05D004653 ORTHO05D006221 6.4e-81 305.1 214 65.4
Rhsim06G0074900 Rhododendron simsii HOM05D004653 ORTHO05D006221 2.4e-80 303.1 245 60.4
PGR031G0949 Punica granatum HOM05D004653 ORTHO05D006221 5.4e-80 302.0 214 65.0
Gohir.A05G265600 Gossypium hirsutum HOM05D004653 ORTHO05D006221 2.0e-79 300.1 181 72.4
arahy.Tifrunner.gnm1.ann1.Y1WP0G Arachis hypogaea HOM05D004653 ORTHO05D006221 1.7e-78 297.0 214 63.1
HPP92_004102 Vanilla planifolia HOM05D004653 ORTHO05D006221 6.6e-78 295.0 214 62.6
Sabra02G0080400 Salix brachista HOM05D004653 ORTHO05D006221 1.1e-77 294.3 288 50.3
HPP92_004087 Vanilla planifolia HOM05D004653 ORTHO05D006221 3.3e-77 292.7 214 62.1
AagrBONN_evm.TU.Sc2ySwM_368.1227 Anthoceros agrestis HOM05D004653 ORTHO05D006221 1.4e-75 287.3 217 62.7
MBI02_g18292_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 2.6e-74 283.1 214 60.7
Pp3c2_19610 Physcomitrium patens HOM05D004653 ORTHO05D006221 5.8e-74 282.0 215 60.0
Nitab4.5_0000642g0300 Nicotiana tabacum HOM05D004653 ORTHO05D006221 4.9e-73 278.9 214 59.3
Oeu042973.1 Olea europaea HOM05D004653 ORTHO05D006221 3.2e-72 276.2 214 61.7
Oeu042971.1 Olea europaea HOM05D004653 ORTHO05D006221 6.0e-71 271.9 214 60.7
Cc07_g19270 Coffea canephora HOM05D004653 ORTHO05D006221 7.8e-71 271.6 214 56.5
MSTRG.23084 Avicennia marina HOM05D004653 ORTHO05D006221 4.7e-68 262.3 214 58.9
SGA_v2.0_scaffold467G52033 Striga asiatica HOM05D004653 ORTHO05D006221 4.0e-67 259.2 220 55.5
Migut.I00062 Erythranthe guttata HOM05D004653 ORTHO05D006221 9.9e-66 254.6 214 55.6
CAN.G853.20 Capsicum annuum HOM05D004653 ORTHO05D006221 3.7e-65 252.7 214 55.6
SalBow5G2478 Salvia bowleyana HOM05D004653 ORTHO05D006221 4.9e-65 252.3 215 53.0
Sopen03g032820 Solanum pennellii HOM05D004653 ORTHO05D006221 1.0e-62 244.6 214 54.7
Solyc03g113770.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 6.6e-62 241.9 214 53.7
Nitab4.5_0024258g0010 Nicotiana tabacum HOM05D004653 ORTHO05D006221 8.1e-60 235.0 174 60.9
Nitab4.5_0007586g0050 Nicotiana tabacum HOM05D004653 ORTHO05D006221 4.0e-59 232.6 214 52.8
Lalb_Chr23g0270171 Lupinus albus HOM05D004653 ORTHO05D006221 5.2e-59 232.3 163 63.2
MBI17_g06166_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 5.8e-58 228.8 224 52.7
CBR_g24311 Chara braunii HOM05D000019 ORTHO05D000353 1.2e-55 221.1 163 62.0
CSS0017284 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 5.1e-54 215.7 167 60.5
Zm00001eb027880 Zea mays HOM05D004653 ORTHO05D006221 5.8e-50 202.2 137 67.9
Cre08.g378200 Chlamydomonas reinhardtii HOM05D004653 ORTHO05D006221 4.6e-47 192.6 232 46.6
Actinidia10360 Actinidia chinensis HOM05D004653 ORTHO05D006221 1.1e-37 161.4 105 68.6
Glyma.06G095451 Glycine max HOM05D004653 ORTHO05D006221 1.9e-29 134.0 85 70.6
MCO02G367 Micromonas commoda HOM05D004653 ORTHO05D006221 9.0e-27 125.2 108 51.9
PGSC0003DMG400024580 Solanum tuberosum HOM05D004653 ORTHO05D006221 2.9e-25 120.2 214 33.6
SEGI_32416 Sequoiadendron giganteum HOM05D000104 ORTHO05D019205 7.2e-16 89.0 53 75.5
PRCOL_00006962 Prasinoderma coloniale HOM05D004653 ORTHO05D006221 3.6e-15 86.7 58 60.3
Glyma.06G095500 Glycine max HOM05D004653 ORTHO05D006221 7.9e-15 85.5 63 63.5
CBR_g24313 Chara braunii HOM05D004653 ORTHO05D006221 6.3e-12 75.9 57 59.6
BcaB08g35370 Brassica carinata HOM05D004653 ORTHO05D006221 3.8e-09 66.6 60 51.7
Dinv42645 Davidia involucrata HOM05D004653 ORTHO05D006221 3.6e-07 60.1 46 52.2
CSS0010132 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 7.9e-07 58.9 30 83.3


User provided reference genes

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