Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_16576 Sequoiadendron giganteum HOM05D004110 ORTHO05D004810 1.2e-127 459.9 248 100.0
SEGI_22139 Sequoiadendron giganteum HOM05D004110 ORTHO05D004810 7.0e-99 364.4 199 99.5
Pp3c5_12360 Physcomitrium patens HOM05D004110 ORTHO05D004810 6.4e-36 155.2 233 41.6
Mapoly0001s0208 Marchantia polymorpha HOM05D004110 ORTHO05D004810 6.7e-33 145.2 237 39.2
ATR0810G267 Amborella trichopoda HOM05D004110 ORTHO05D004810 3.1e-30 136.3 222 39.2
AagrBONN_evm.TU.Sc2ySwM_344.4164 Anthoceros agrestis HOM05D004110 ORTHO05D004810 1.9e-27 127.1 186 40.9
MBI05_g07505_MAGBIO Magnolia biondii HOM05D004110 ORTHO05D004810 2.8e-23 113.2 203 39.4
PSO541G0713 Papaver somniferum HOM05D004110 ORTHO05D004810 6.9e-22 108.6 211 37.0
PSO675G3689 Papaver somniferum HOM05D004110 ORTHO05D004810 1.5e-21 107.5 236 35.6
Aqoxy2G01068 Aquilegia oxysepala HOM05D004110 ORTHO05D004810 1.1e-19 101.3 221 35.7
Dinv04965 Davidia involucrata HOM05D004110 ORTHO05D004810 1.9e-19 100.5 241 32.4
CBR_g5647 Chara braunii HOM05D004110 ORTHO05D004810 4.2e-19 99.4 243 34.2
CsaV3_2G015750 Cucumis sativus L. HOM05D004110 ORTHO05D004810 4.2e-19 99.4 239 33.1
TAR376G1212 Trochodendron aralioides HOM05D004110 ORTHO05D004810 5.5e-19 99.0 188 36.7
Sopen11g016530 Solanum pennellii HOM05D004110 ORTHO05D004810 2.1e-18 97.1 215 30.2
vmacro17377 Vaccinium macrocarpon HOM05D004110 ORTHO05D004810 2.1e-18 97.1 204 35.3
Sed0006799 Sechium edule HOM05D004110 ORTHO05D004810 2.7e-18 96.7 237 31.2
Duzib248G0147 Durio zibethinus HOM05D004110 ORTHO05D004810 3.6e-18 96.3 236 33.1
Nn5g29099 Nelumbo nucifera HOM05D004110 ORTHO05D004810 4.6e-18 95.9 197 35.0
Peaxi162Scf00684g00023 Petunia axillaris HOM05D004110 ORTHO05D004810 4.6e-18 95.9 214 34.1
A06p48910 Brassica napus HOM05D004110 ORTHO05D004810 1.0e-17 94.7 224 30.4
BraA06t27759Z Brassica rapa HOM05D004110 ORTHO05D004810 1.0e-17 94.7 224 30.4
PGR142G1237 Punica granatum HOM05D004110 ORTHO05D004810 1.0e-17 94.7 183 33.9
Solyc11g039880.2 Solanum lycopersicum HOM05D004110 ORTHO05D004810 1.0e-17 94.7 215 30.2
C07p63600 Brassica napus HOM05D004110 ORTHO05D004810 3.0e-17 93.2 224 29.9
BolC7t46773H Brassica oleracea HOM05D004110 ORTHO05D004810 3.0e-17 93.2 224 29.9
CAN.G603.1 Capsicum annuum HOM05D004110 ORTHO05D004810 3.9e-17 92.8 215 30.7
Actinidia29167 Actinidia chinensis HOM05D004110 ORTHO05D004810 5.1e-17 92.4 227 31.3
CiPaw.06G125000 Carya illinoinensis HOM05D004110 ORTHO05D004810 1.1e-16 91.3 206 33.5
Carub.0007s0061 Capsella rubella HOM05D004110 ORTHO05D004810 1.5e-16 90.9 223 30.9
Migut.B00121 Erythranthe guttata HOM05D004110 ORTHO05D004810 1.5e-16 90.9 194 34.5
Rhsim05G0062900 Rhododendron simsii HOM05D004110 ORTHO05D004810 2.0e-16 90.5 217 34.1
QL11p047649 Quercus lobata HOM05D004110 ORTHO05D004810 2.5e-16 90.1 235 31.9
Sp7g37050 Schrenkiella parvula HOM05D004110 ORTHO05D004810 2.5e-16 90.1 231 31.2
Eucgr.I01378 Eucalyptus grandis HOM05D004110 ORTHO05D004810 3.3e-16 89.7 202 32.2
BcaNung01969 Brassica carinata HOM05D004110 ORTHO05D004810 4.3e-16 89.4 212 30.2
Thecc.02G066600 Theobroma cacao HOM05D004110 ORTHO05D004810 4.3e-16 89.4 237 32.9
AT4G38760 Arabidopsis thaliana HOM05D004110 ORTHO05D004810 5.7e-16 89.0 221 29.4
Thhalv10024188m.g Eutrema salsugineum HOM05D004110 ORTHO05D004810 5.7e-16 89.0 202 31.7
Cfa005187 Carpinus fangiana HOM05D004110 ORTHO05D004810 7.4e-16 88.6 197 32.5
THA.LOC104824773 Tarenaya hassleriana HOM05D004110 ORTHO05D004810 7.4e-16 88.6 250 30.8
Gorai.008G034000 Gossypium raimondii HOM05D004110 ORTHO05D004810 1.3e-15 87.8 210 32.9
Haze_02193 Corylus avellana HOM05D004110 ORTHO05D004810 1.7e-15 87.4 198 32.8
GSVIVG01024075001 Vitis vinifera HOM05D004110 ORTHO05D004810 1.7e-15 87.4 190 31.1
AL7G10630 Arabidopsis lyrata HOM05D004110 ORTHO05D004810 2.2e-15 87.0 221 29.4
CSS0024884 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 4.8e-15 85.9 196 31.1
Gohir.D12G033200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 4.8e-15 85.9 210 32.4
MD05G1116500 Malus domestica HOM05D004110 ORTHO05D004810 4.8e-15 85.9 191 33.5
Lalb_Chr01g0001341 Lupinus albus HOM05D004110 ORTHO05D004810 6.3e-15 85.5 187 32.6
Gohir.A12G039200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 8.2e-15 85.1 210 32.4
Phvul.011G026800 Phaseolus vulgaris HOM05D004110 ORTHO05D004810 1.1e-14 84.7 233 30.9
Oeu014463.1 Olea europaea HOM05D004110 ORTHO05D004810 1.8e-14 84.0 194 32.0
DCAR_022780 Daucus carota HOM05D004110 ORTHO05D004810 2.4e-14 83.6 215 29.8
Hund00042 Selenicereus undatus HOM05D004110 ORTHO05D004810 2.4e-14 83.6 176 33.0
Glyma.12G024600 Glycine max HOM05D004110 ORTHO05D004810 4.1e-14 82.8 234 31.2
AUR62010090 Chenopodium quinoa HOM05D004110 ORTHO05D004810 5.3e-14 82.4 217 29.5
Lsat_1_v5_gn_4_74700 Lactuca sativa HOM05D004110 ORTHO05D004810 6.9e-14 82.0 205 30.2
Prupe.8G161000 Prunus persica HOM05D004110 ORTHO05D004810 2.0e-13 80.5 206 30.6
arahy.Tifrunner.gnm1.ann1.6KB8MN Arachis hypogaea HOM05D004110 ORTHO05D004810 2.6e-13 80.1 187 32.6
Lj5C184G3 Lonicera japonica HOM05D004110 ORTHO05D004810 4.5e-13 79.3 234 29.1
Manes.04G077900 Manihot esculenta HOM05D004110 ORTHO05D004810 5.9e-13 79.0 248 30.2
Psat7g138160 Pisum sativum HOM05D004110 ORTHO05D004810 5.9e-13 79.0 214 29.9
ECA234G0434 Erigeron canadensis HOM05D004110 ORTHO05D004810 7.7e-13 78.6 197 32.0
AUR62013086 Chenopodium quinoa HOM05D004110 ORTHO05D004810 1.0e-12 78.2 158 34.2
HanXRQChr10g0299011 Helianthus annuus HOM05D004110 ORTHO05D004810 1.0e-12 78.2 206 29.1
arahy.Tifrunner.gnm1.ann1.5454UR Arachis hypogaea HOM05D004110 ORTHO05D004810 1.7e-12 77.4 187 31.6
MSTRG.20018 Avicennia marina HOM05D004110 ORTHO05D004810 2.2e-12 77.0 175 35.4
Lj3g0009405 Lotus japonicus HOM05D004110 ORTHO05D004810 2.2e-12 77.0 214 29.9
Sc18g0006650 Simmondsia chinensis HOM05D004110 ORTHO05D004810 2.9e-12 76.6 216 32.9
Medtr4g075330 Medicago truncatula HOM05D004110 ORTHO05D004810 6.5e-12 75.5 191 29.8
FvH4_2g01950 Fragaria vesca HOM05D004110 ORTHO05D004810 1.4e-11 74.3 193 28.5
FAN24G2945 Fragaria x ananassa HOM05D004110 ORTHO05D004810 1.4e-11 74.3 193 28.5
FAN20G3101 Fragaria x ananassa HOM05D004110 ORTHO05D004810 1.9e-11 73.9 193 28.5
Ciclev10027667m.g Citrus clementina HOM05D004110 ORTHO05D004810 2.5e-11 73.6 244 29.1
FAN15G2714 Fragaria x ananassa HOM05D004110 ORTHO05D004810 2.5e-11 73.6 193 28.5
CANSAT25G3021 Cannabis sativa HOM05D004110 ORTHO05D004810 3.2e-11 73.2 235 28.1
Ah.01g022610 Amaranthus hybridus HOM05D004110 ORTHO05D004810 5.5e-11 72.4 188 29.3
SGA_v2.0_scaffold58G20427 Striga asiatica HOM05D004110 ORTHO05D004810 5.5e-11 72.4 194 28.4
Zm00001eb026650 Zea mays HOM05D004110 ORTHO05D004810 1.6e-10 70.9 219 30.1
EL10Ac9g21435 Beta vulgaris HOM05D004110 ORTHO05D004810 2.1e-10 70.5 230 27.0
Ca_19005_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 2.7e-10 70.1 226 29.6
Ca_30033_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 2.7e-10 70.1 226 29.6
Potri.009G130000 Populus trichocarpa HOM05D004110 ORTHO05D004810 2.7e-10 70.1 187 29.9
RcHm_v2.0_Chr6g0245151 Rosa chinensis HOM05D004110 ORTHO05D004810 3.6e-10 69.7 236 27.5
Nitab4.5_0007580g0010 Nicotiana tabacum HOM05D004110 ORTHO05D004810 2.3e-09 67.0 296 23.3
Sabra09G0099400 Salix brachista HOM05D004110 ORTHO05D004810 2.6e-08 63.5 187 28.9
Cc02_g16480 Coffea canephora HOM05D004110 ORTHO05D004810 2.2e-07 60.5 230 27.4
MD10G1119400 Malus domestica HOM05D004110 ORTHO05D004810 5.3e-06 55.8 93 36.6


User provided reference genes

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