Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_16502 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 2.7e-83 312.0 163 100.0
SEGI_02143 Sequoiadendron giganteum HOM05D000252 ORTHO05D006173 3.5e-22 109.0 123 48.0
CDE09G0807 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 3.4e-09 65.9 49 69.4
AagrBONN_evm.TU.Sc2ySwM_228.1213 Anthoceros agrestis HOM05D006383 ORTHO05D007815 4.4e-09 65.5 49 57.1
TPR.G38040 Trifolium pratense HOM05D006383 ORTHO05D007815 7.5e-09 64.7 50 68.0
Pp3c21_10400 Physcomitrium patens HOM05D006383 ORTHO05D007815 9.8e-09 64.3 49 61.2
Zm00001eb341540 Zea mays HOM05D006383 ORTHO05D007815 1.3e-08 63.9 49 67.3
Pp3c19_5540 Physcomitrium patens HOM05D006383 ORTHO05D007815 1.7e-08 63.5 49 59.2
Os01g0104600 Oryza sativa ssp. japonica HOM05D006383 ORTHO05D007815 2.2e-08 63.2 49 65.3
Nn1g08377 Nelumbo nucifera HOM05D006383 ORTHO05D007815 2.9e-08 62.8 49 65.3
PSO063G0245 Papaver somniferum HOM05D006383 ORTHO05D007815 2.9e-08 62.8 49 61.2
ATR0620G042 Amborella trichopoda HOM05D006383 ORTHO05D007815 3.7e-08 62.4 52 63.5
Medtr5g008710 Medicago truncatula HOM05D006383 ORTHO05D007815 3.7e-08 62.4 50 66.0
Aqoxy1G01561 Aquilegia oxysepala HOM05D006383 ORTHO05D007815 8.3e-08 61.2 47 63.8
PSO782G2360 Papaver somniferum HOM05D006383 ORTHO05D007815 1.1e-07 60.8 49 59.2
Psat2g186800 Pisum sativum HOM05D006383 ORTHO05D007815 1.1e-07 60.8 50 66.0
vmacro20727 Vaccinium macrocarpon HOM05D006383 ORTHO05D007815 1.1e-07 60.8 50 64.0
Zm00001eb317230 Zea mays HOM05D006383 ORTHO05D007815 1.1e-07 60.8 49 63.3
CSS0026217 Camellia sinensis var. sinensis HOM05D006383 ORTHO05D007815 1.9e-07 60.1 50 60.0
Glyma.01G231700 Glycine max HOM05D006383 ORTHO05D007815 2.4e-07 59.7 50 62.0
Glyma.11G014600 Glycine max HOM05D006383 ORTHO05D007815 2.4e-07 59.7 50 62.0
LjContig00222g0014398 Lotus japonicus HOM05D006383 ORTHO05D007815 2.4e-07 59.7 50 62.0
Mapoly0064s0101 Marchantia polymorpha HOM05D006383 ORTHO05D007815 3.2e-07 59.3 50 62.0
Cfa008544 Carpinus fangiana HOM05D006383 ORTHO05D007815 4.1e-07 58.9 50 64.0
Duzib248G1218 Durio zibethinus HOM05D006383 ORTHO05D007815 5.4e-07 58.5 49 59.2
Phvul.002G035400 Phaseolus vulgaris HOM05D006383 ORTHO05D007815 5.4e-07 58.5 50 62.0
HPP92_022268 Vanilla planifolia HOM05D006383 ORTHO05D007815 5.4e-07 58.5 50 66.0
HPP92_022397 Vanilla planifolia HOM05D006383 ORTHO05D007815 5.4e-07 58.5 50 66.0
Hma1.2p1_0122F.1_g057520 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 7.1e-07 58.2 50 60.0
Hma1.2p1_0122F.1_g057530 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 7.1e-07 58.2 50 60.0
BcaB01g02763 Brassica carinata HOM05D006383 ORTHO05D007815 9.2e-07 57.8 49 57.1
BcaC01g04690 Brassica carinata HOM05D006383 ORTHO05D007815 9.2e-07 57.8 49 57.1
A03p28870 Brassica napus HOM05D006383 ORTHO05D007815 9.2e-07 57.8 49 57.1
C03p34900 Brassica napus HOM05D006383 ORTHO05D007815 9.2e-07 57.8 49 57.1
BolC3t15801H Brassica oleracea HOM05D006383 ORTHO05D007815 9.2e-07 57.8 49 57.1
BraA03t12085Z Brassica rapa HOM05D006383 ORTHO05D007815 9.2e-07 57.8 49 57.1
Carub.0006s2874 Capsella rubella HOM05D006383 ORTHO05D007815 9.2e-07 57.8 49 57.1
Thhalv10028566m.g Eutrema salsugineum HOM05D006383 ORTHO05D007815 9.2e-07 57.8 49 57.1
Sp6g07220 Schrenkiella parvula HOM05D006383 ORTHO05D007815 9.2e-07 57.8 49 57.1
VMungo1215G1626 Vigna mungo HOM05D006383 ORTHO05D007815 9.2e-07 57.8 50 60.0
CiPaw.02G126400 Carya illinoinensis HOM05D006383 ORTHO05D007815 1.2e-06 57.4 50 60.0
Peaxi162Scf00005g01511 Petunia axillaris HOM05D006383 ORTHO05D007815 1.2e-06 57.4 49 55.1
Sopen01g020410 Solanum pennellii HOM05D006383 ORTHO05D007815 1.2e-06 57.4 49 55.1
TAR317G0001 Trochodendron aralioides HOM05D006383 ORTHO05D007815 1.2e-06 57.4 50 60.0
GSVIVG01027490001 Vitis vinifera HOM05D006383 ORTHO05D007815 1.2e-06 57.4 49 57.1
Atru.chr4.4 Acer truncatum HOM05D006383 ORTHO05D007815 1.6e-06 57.0 50 62.0
AL6G44030 Arabidopsis lyrata HOM05D006383 ORTHO05D007815 1.6e-06 57.0 49 57.1
AT4G10180 Arabidopsis thaliana HOM05D006383 ORTHO05D007815 1.6e-06 57.0 49 57.1
Ciclev10015119m.g Citrus clementina HOM05D006383 ORTHO05D007815 1.6e-06 57.0 50 64.0
Pp3c11_18250 Physcomitrium patens HOM05D006383 ORTHO05D007815 1.6e-06 57.0 49 55.1
Aa31LG9G11770 Aethionema arabicum HOM05D006383 ORTHO05D007815 2.1e-06 56.6 49 57.1
CARHR256640 Cardamine hirsuta HOM05D006383 ORTHO05D007815 2.1e-06 56.6 49 55.1
Nitab4.5_0007118g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 2.1e-06 56.6 49 53.1
Sc26g0001410 Simmondsia chinensis HOM05D006383 ORTHO05D007815 2.1e-06 56.6 50 58.0
DCAR_020439 Daucus carota HOM05D006383 ORTHO05D007815 2.7e-06 56.2 50 62.0
MD02G1269900 Malus domestica HOM05D006383 ORTHO05D007815 2.7e-06 56.2 50 60.0
QL10p065235 Quercus lobata HOM05D006383 ORTHO05D007815 2.7e-06 56.2 50 60.0
SMO351G0573 Selaginella moellendorffii HOM05D006383 ORTHO05D007815 2.7e-06 56.2 49 57.1
THA.LOC104813077 Tarenaya hassleriana HOM05D006383 ORTHO05D007815 2.7e-06 56.2 49 55.1
TWI79G0526 Tripterygium wilfordii HOM05D006383 ORTHO05D007815 2.7e-06 56.2 49 59.2
Actinidia07537 Actinidia chinensis HOM05D006383 ORTHO05D007815 3.5e-06 55.8 49 55.1
Lj8A304T42 Lonicera japonica HOM05D006383 ORTHO05D007815 3.5e-06 55.8 50 58.0
AUR62030094 Chenopodium quinoa HOM05D006383 ORTHO05D007815 4.6e-06 55.5 49 53.1
AUR62038212 Chenopodium quinoa HOM05D006383 ORTHO05D007815 4.6e-06 55.5 49 53.1
Nitab4.5_0000075g0020 Nicotiana tabacum HOM05D006383 ORTHO05D007815 4.6e-06 55.5 47 53.2
CiPaw.01G204500 Carya illinoinensis HOM05D006383 ORTHO05D007815 6.0e-06 55.1 50 56.0
Haze_11088 Corylus avellana HOM05D006383 ORTHO05D007815 6.0e-06 55.1 50 60.0
Migut.L01608 Erythranthe guttata HOM05D006383 ORTHO05D007815 6.0e-06 55.1 50 56.0
EL10Ac3g06365 Beta vulgaris HOM05D006383 ORTHO05D007815 7.8e-06 54.7 49 53.1
CBR_g19443 Chara braunii HOM05D006383 ORTHO05D007815 7.8e-06 54.7 51 58.8
Eucgr.E01781 Eucalyptus grandis HOM05D006383 ORTHO05D007815 7.8e-06 54.7 50 56.0
Thecc.02G151200 Theobroma cacao HOM05D006383 ORTHO05D007815 7.8e-06 54.7 49 57.1


User provided reference genes

Program Settings