Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_16352 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 2.0e-112 409.1 202 100.0
SEGI_22812 Sequoiadendron giganteum HOM05D014429 ORTHO05D003561 3.1e-44 182.6 122 76.2
SEGI_37982 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 6.8e-44 181.4 94 92.6
SEGI_18915 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 4.9e-42 175.3 86 96.5
SEGI_09967 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 1.7e-39 166.8 100 83.0
SEGI_32224 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 1.2e-32 144.1 71 94.4
SEGI_25943 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 1.9e-30 136.7 69 91.3
SEGI_39328 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 1.3e-13 80.9 77 58.4
QL01p044747 Quercus lobata HOM05D002984 ORTHO05D003561 1.3e-10 70.9 86 46.5
Ciclev10030710m.g Citrus clementina HOM05D002984 ORTHO05D003561 5.0e-10 68.9 76 47.4
HanXRQChr16g0529571 Helianthus annuus HOM05D002984 ORTHO05D003561 5.0e-10 68.9 77 48.1
Lsat_1_v5_gn_4_19001 Lactuca sativa HOM05D002984 ORTHO05D003561 5.0e-10 68.9 76 48.7
FAN13G2905 Fragaria x ananassa HOM05D002984 ORTHO05D003561 8.4e-10 68.2 95 41.1
Os09g0306700 Oryza sativa ssp. japonica HOM05D002984 ORTHO05D003561 1.1e-09 67.8 76 48.7
TWI31G1103 Tripterygium wilfordii HOM05D002984 ORTHO05D003561 1.4e-09 67.4 76 46.1
TWI79G1384 Tripterygium wilfordii HOM05D002984 ORTHO05D003561 1.4e-09 67.4 76 44.7
Lsat_1_v5_gn_4_19021 Lactuca sativa HOM05D002984 ORTHO05D003561 1.9e-09 67.0 77 46.8
Nn4g23754 Nelumbo nucifera HOM05D002984 ORTHO05D003561 1.9e-09 67.0 76 47.4
Actinidia14860 Actinidia chinensis HOM05D002984 ORTHO05D003561 2.5e-09 66.6 76 46.1
Aqoxy3G00352 Aquilegia oxysepala HOM05D002984 ORTHO05D003561 2.5e-09 66.6 77 45.5
CiPaw.16G003700 Carya illinoinensis HOM05D002984 ORTHO05D003561 3.2e-09 66.2 78 43.6
FvH4_4g27961 Fragaria vesca HOM05D002984 ORTHO05D003561 3.2e-09 66.2 76 47.4
FvH4_6g01630 Fragaria vesca HOM05D002984 ORTHO05D003561 3.2e-09 66.2 101 37.6
FAN12G2547 Fragaria x ananassa HOM05D002984 ORTHO05D003561 3.2e-09 66.2 76 47.4
Potri.010G128600 Populus trichocarpa HOM05D002984 ORTHO05D003561 3.2e-09 66.2 76 46.1
FAN10G3298 Fragaria x ananassa HOM05D002984 ORTHO05D003561 4.2e-09 65.9 82 46.3
GSVIVG01011939001 Vitis vinifera HOM05D002984 ORTHO05D003561 5.5e-09 65.5 76 46.1
CSS0018296 Camellia sinensis var. sinensis HOM05D002984 ORTHO05D003561 7.1e-09 65.1 76 44.7
CSS0023076 Camellia sinensis var. sinensis HOM05D002984 ORTHO05D003561 7.1e-09 65.1 76 44.7
PSO017G4771 Papaver somniferum HOM05D002984 ORTHO05D003561 7.1e-09 65.1 98 39.8
PSO478G2088 Papaver somniferum HOM05D002984 ORTHO05D003561 7.1e-09 65.1 98 39.8
vmacro10537 Vaccinium macrocarpon HOM05D002984 ORTHO05D003561 7.1e-09 65.1 100 42.0
Cc11_g10490 Coffea canephora HOM05D002984 ORTHO05D003561 9.3e-09 64.7 75 45.3
Pp3c25_2430 Physcomitrium patens HOM05D002984 ORTHO05D003561 9.3e-09 64.7 76 48.7
Hund03157 Selenicereus undatus HOM05D002984 ORTHO05D003561 9.3e-09 64.7 76 46.1
Potri.008G117700 Populus trichocarpa HOM05D002984 ORTHO05D003561 1.2e-08 64.3 76 46.1
RcHm_v2.0_Chr4g0435671 Rosa chinensis HOM05D002984 ORTHO05D003561 1.2e-08 64.3 101 38.6
Migut.E00313 Erythranthe guttata HOM05D002984 ORTHO05D003561 1.6e-08 63.9 76 44.7
Atru.chr11.1335 Acer truncatum HOM05D002984 ORTHO05D003561 2.1e-08 63.5 76 43.4
Atru.chr11.1338 Acer truncatum HOM05D002984 ORTHO05D003561 2.1e-08 63.5 76 43.4
BcaC05g26443 Brassica carinata HOM05D002984 ORTHO05D003561 2.1e-08 63.5 78 41.0
C05p24920 Brassica napus HOM05D002984 ORTHO05D003561 2.1e-08 63.5 78 41.0
BolC5t31221H Brassica oleracea HOM05D002984 ORTHO05D003561 2.1e-08 63.5 78 41.0
Gohir.D13G070100 Gossypium hirsutum HOM05D002984 ORTHO05D003561 2.1e-08 63.5 76 44.7
Gorai.013G080300 Gossypium raimondii HOM05D002984 ORTHO05D003561 2.1e-08 63.5 76 44.7
Lj6A762T42 Lonicera japonica HOM05D002984 ORTHO05D003561 2.1e-08 63.5 77 45.5
Lj6C764G13 Lonicera japonica HOM05D002984 ORTHO05D003561 2.1e-08 63.5 77 45.5
Thecc.02G359700 Theobroma cacao HOM05D002984 ORTHO05D003561 2.1e-08 63.5 76 44.7
FvH4_5g05460 Fragaria vesca HOM05D002984 ORTHO05D003561 2.7e-08 63.2 101 36.6
FAN18G2442 Fragaria x ananassa HOM05D002984 ORTHO05D003561 2.7e-08 63.2 101 36.6
Gohir.A13G053428 Gossypium hirsutum HOM05D002984 ORTHO05D003561 2.7e-08 63.2 76 44.7
Pp3c25_2660 Physcomitrium patens HOM05D002984 ORTHO05D003561 2.7e-08 63.2 76 48.7
Prupe.1G306600 Prunus persica HOM05D002984 ORTHO05D003561 2.7e-08 63.2 76 44.7
Sc25g0002400 Simmondsia chinensis HOM05D002984 ORTHO05D003561 2.7e-08 63.2 75 45.3
Zm00001eb097890 Zea mays HOM05D002984 ORTHO05D003561 2.7e-08 63.2 76 46.1
CANSAT64G2157 Cannabis sativa HOM05D002984 ORTHO05D003561 3.5e-08 62.8 76 40.8
ECA234G4415 Erigeron canadensis HOM05D002984 ORTHO05D003561 3.5e-08 62.8 76 46.1
Hma1.2p1_0030F.1_g018360 Hydrangea macrophylla HOM05D002984 ORTHO05D003561 3.5e-08 62.8 100 37.0
MBI01_g32855_MAGBIO Magnolia biondii HOM05D002984 ORTHO05D003561 3.5e-08 62.8 77 44.2
Nitab4.5_0005194g0020 Nicotiana tabacum HOM05D002984 ORTHO05D003561 3.5e-08 62.8 76 44.7
Sabra02G0035000 Salix brachista HOM05D002984 ORTHO05D003561 3.5e-08 62.8 76 46.1
Sabra08G0089300 Salix brachista HOM05D002984 ORTHO05D003561 3.5e-08 62.8 76 46.1
Sabra10G0097800 Salix brachista HOM05D002984 ORTHO05D003561 3.5e-08 62.8 76 46.1
Eucgr.D01061 Eucalyptus grandis HOM05D002984 ORTHO05D003561 6.1e-08 62.0 74 45.9
FAN22G1846 Fragaria x ananassa HOM05D002984 ORTHO05D003561 6.1e-08 62.0 76 44.7
Nitab4.5_0000489g0040 Nicotiana tabacum HOM05D002984 ORTHO05D003561 6.1e-08 62.0 76 46.1
Peaxi162Scf00004g01518 Petunia axillaris HOM05D002984 ORTHO05D003561 6.1e-08 62.0 76 43.4
A09p39560 Brassica napus HOM05D002984 ORTHO05D003561 7.9e-08 61.6 76 40.8
BraA09t39454Z Brassica rapa HOM05D002984 ORTHO05D003561 7.9e-08 61.6 76 40.8
COL.COLO4_07881 Corchorus olitorius HOM05D002984 ORTHO05D003561 7.9e-08 61.6 76 42.1
Manes.14G098600 Manihot esculenta HOM05D002984 ORTHO05D003561 7.9e-08 61.6 76 43.4
Nitab4.5_0000672g0110 Nicotiana tabacum HOM05D002984 ORTHO05D003561 7.9e-08 61.6 74 45.9
SMO118G0238 Selaginella moellendorffii HOM05D002984 ORTHO05D003561 7.9e-08 61.6 72 41.7
Solyc12g070100.2 Solanum lycopersicum HOM05D002984 ORTHO05D003561 7.9e-08 61.6 76 42.1
Haze_17450 Corylus avellana HOM05D002984 ORTHO05D003561 1.0e-07 61.2 76 40.8
FAN03G1604 Fragaria x ananassa HOM05D002984 ORTHO05D003561 1.0e-07 61.2 73 43.8
FAN18G3612 Fragaria x ananassa HOM05D002984 ORTHO05D003561 1.0e-07 61.2 101 35.6
Oeu041887.1 Olea europaea HOM05D002984 ORTHO05D003561 1.0e-07 61.2 76 40.8
SMO356G0715 Selaginella moellendorffii HOM05D002984 ORTHO05D003561 1.0e-07 61.2 72 41.7
TAR622G0040 Trochodendron aralioides HOM05D002984 ORTHO05D003561 1.0e-07 61.2 76 42.1
AL1G39760 Arabidopsis lyrata HOM05D002984 ORTHO05D003561 1.3e-07 60.8 78 41.0
CARHR025920 Cardamine hirsuta HOM05D002984 ORTHO05D003561 1.3e-07 60.8 78 39.7
Oeu010774.1 Olea europaea HOM05D002984 ORTHO05D003561 1.3e-07 60.8 74 43.2
Sopen12g027160 Solanum pennellii HOM05D002984 ORTHO05D003561 1.3e-07 60.8 76 40.8
Duzib251G0734 Durio zibethinus HOM05D002984 ORTHO05D003561 1.8e-07 60.5 76 43.4
Gohir.A03G097900 Gossypium hirsutum HOM05D002984 ORTHO05D003561 1.8e-07 60.5 76 42.1
Gohir.D02G115800 Gossypium hirsutum HOM05D002984 ORTHO05D003561 1.8e-07 60.5 76 42.1
Gorai.005G138200 Gossypium raimondii HOM05D002984 ORTHO05D003561 1.8e-07 60.5 76 42.1
ATR0681G393 Amborella trichopoda HOM05D002984 ORTHO05D003561 2.3e-07 60.1 75 46.7
CAN.G2.30 Capsicum annuum HOM05D002984 ORTHO05D003561 2.3e-07 60.1 74 43.2
CAN.G2.31 Capsicum annuum HOM05D002984 ORTHO05D003561 2.3e-07 60.1 103 36.9
Thhalv10006778m.g Eutrema salsugineum HOM05D002984 ORTHO05D003561 2.3e-07 60.1 78 41.0
Sp1g22670 Schrenkiella parvula HOM05D002984 ORTHO05D003561 2.3e-07 60.1 78 39.7
Dinv21122 Davidia involucrata HOM05D002984 ORTHO05D003561 3.0e-07 59.7 100 36.0
HanXRQChr17g0552241 Helianthus annuus HOM05D002984 ORTHO05D003561 3.0e-07 59.7 69 46.4
Lsat_1_v5_gn_3_60001 Lactuca sativa HOM05D002984 ORTHO05D003561 3.0e-07 59.7 69 46.4
Carub.0001s2494 Capsella rubella HOM05D002984 ORTHO05D003561 3.9e-07 59.3 78 39.7
BcaC01g01711 Brassica carinata HOM05D002984 ORTHO05D003561 5.1e-07 58.9 78 39.7
BolC3t19582H Brassica oleracea HOM05D002984 ORTHO05D003561 5.1e-07 58.9 78 39.7
Mapoly0022s0114 Marchantia polymorpha HOM05D002984 ORTHO05D003561 5.1e-07 58.9 80 42.5
THA.LOC104821957 Tarenaya hassleriana HOM05D002984 ORTHO05D003561 5.1e-07 58.9 78 39.7
HPP92_024319 Vanilla planifolia HOM05D002984 ORTHO05D003561 5.1e-07 58.9 76 44.7
EL10Ac3g05929 Beta vulgaris HOM05D002984 ORTHO05D003561 6.7e-07 58.5 76 42.1
C03p72840 Brassica napus HOM05D002984 ORTHO05D003561 6.7e-07 58.5 78 38.5
Glyma.02G098300 Glycine max HOM05D002984 ORTHO05D003561 6.7e-07 58.5 76 44.7
MELO3C012221.2 Cucumis melo HOM05D002984 ORTHO05D003561 8.7e-07 58.2 74 43.2
Solyc05g009710.4 Solanum lycopersicum HOM05D002984 ORTHO05D003561 8.7e-07 58.2 97 37.1
A08p27060 Brassica napus HOM05D002984 ORTHO05D003561 1.1e-06 57.8 78 38.5
BraA08t34651Z Brassica rapa HOM05D002984 ORTHO05D003561 1.1e-06 57.8 78 38.5
AUR62002298 Chenopodium quinoa HOM05D002984 ORTHO05D003561 1.1e-06 57.8 76 43.4
ClCG05G022960 Citrullus lanatus HOM05D002984 ORTHO05D000550 1.1e-06 57.8 74 43.2
DCAR_026720 Daucus carota HOM05D002984 ORTHO05D003561 1.5e-06 57.4 76 42.1
Phvul.003G028300 Phaseolus vulgaris HOM05D002984 ORTHO05D003561 1.5e-06 57.4 76 43.4
Hund25094 Selenicereus undatus HOM05D002984 ORTHO05D003561 1.5e-06 57.4 67 46.3
PGSC0003DMG401000817 Solanum tuberosum HOM05D002984 ORTHO05D003561 1.5e-06 57.4 97 37.1
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 1.5e-06 57.4 76 40.8
VMungo1215G2122 Vigna mungo HOM05D002984 ORTHO05D003561 1.5e-06 57.4 76 43.4
CsaV3_5G034050 Cucumis sativus L. HOM05D002984 ORTHO05D003561 1.9e-06 57.0 74 43.2
Glyma.01G086201 Glycine max HOM05D002984 ORTHO05D003561 2.5e-06 56.6 76 43.4
AT1G25540 Arabidopsis thaliana HOM05D002984 ORTHO05D003561 3.3e-06 56.2 76 39.5
Cpa.g.sc1.211 Carica papaya HOM05D002984 ORTHO05D003561 3.3e-06 56.2 76 38.2
Sopen05g005530 Solanum pennellii HOM05D002984 ORTHO05D003561 3.3e-06 56.2 75 42.7
Lj2g0026621 Lotus japonicus HOM05D002984 ORTHO05D003561 4.3e-06 55.8 76 43.4
AUR62015392 Chenopodium quinoa HOM05D002984 ORTHO05D003561 5.7e-06 55.5 76 43.4
MD16G1046800 Malus domestica HOM05D002984 ORTHO05D003561 5.7e-06 55.5 101 35.6
PGR142G0084 Punica granatum HOM05D002984 ORTHO05D003561 7.4e-06 55.1 72 43.1
PGR142G1725 Punica granatum HOM05D002984 ORTHO05D003561 7.4e-06 55.1 72 43.1
Ah.13g072880 Amaranthus hybridus HOM05D002984 ORTHO05D003561 9.7e-06 54.7 76 40.8
MBI01_g09372_MAGBIO Magnolia biondii HOM05D002984 ORTHO05D003561 9.7e-06 54.7 77 42.9
Sed0009737 Sechium edule HOM05D002984 ORTHO05D003561 9.7e-06 54.7 76 42.1


User provided reference genes

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