Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_15760 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 2.7e-100 368.6 181 100.0
Mapoly0043s0041 Marchantia polymorpha HOM05D006616 ORTHO05D008435 8.0e-52 207.6 186 58.6
Pp3c10_1890 Physcomitrium patens HOM05D006616 ORTHO05D008435 1.3e-49 200.3 190 61.1
Pp3c10_1896 Physcomitrium patens HOM05D006616 ORTHO05D008435 1.3e-49 200.3 190 61.1
Dinv27270 Davidia involucrata HOM05D006616 ORTHO05D008435 2.8e-49 199.1 150 70.0
Hma1.2p1_2178F.1_g316210 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 8.3e-49 197.6 149 69.1
CsaV3_3G040470 Cucumis sativus L. HOM05D006616 ORTHO05D008435 1.4e-48 196.8 146 70.5
MBI16_g32949_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 1.8e-48 196.4 166 65.7
TAR622G0026 Trochodendron aralioides HOM05D006616 ORTHO05D008435 2.7e-47 192.6 120 80.8
Actinidia03423 Actinidia chinensis HOM05D006616 ORTHO05D008435 3.5e-47 192.2 126 77.8
SGA_v2.0_scaffold25G11136 Striga asiatica HOM05D006616 ORTHO05D008435 3.5e-47 192.2 155 65.8
Atru.chr1.1509 Acer truncatum HOM05D006616 ORTHO05D008435 4.5e-47 191.8 127 77.2
MSTRG.24176 Avicennia marina HOM05D006616 ORTHO05D008435 1.0e-46 190.7 157 65.0
GSVIVG01025818001 Vitis vinifera HOM05D006616 ORTHO05D008435 1.3e-46 190.3 123 77.2
Oeu038315.2 Olea europaea HOM05D006616 ORTHO05D008435 2.9e-46 189.1 128 76.6
Manes.09G002500 Manihot esculenta HOM05D006616 ORTHO05D008435 3.8e-46 188.7 140 70.7
Rhsim11G0071400 Rhododendron simsii HOM05D006616 ORTHO05D008435 5.0e-46 188.3 126 77.8
CiPaw.10G044000 Carya illinoinensis HOM05D006616 ORTHO05D008435 6.6e-46 188.0 126 75.4
Cc10_g12770 Coffea canephora HOM05D006616 ORTHO05D008435 6.6e-46 188.0 150 68.0
Sed0024074 Sechium edule HOM05D006616 ORTHO05D008435 6.6e-46 188.0 146 67.8
Prupe.7G020500 Prunus persica HOM05D006616 ORTHO05D008435 8.6e-46 187.6 123 77.2
ATR0326G030 Amborella trichopoda HOM05D006616 ORTHO05D008435 1.5e-45 186.8 142 66.2
ECA246G4188 Erigeron canadensis HOM05D006616 ORTHO05D008435 1.5e-45 186.8 113 83.2
CDE04G3611 Ceratophyllum demersum HOM05D006616 ORTHO05D008435 2.5e-45 186.0 121 76.9
FAN28G1824 Fragaria x ananassa HOM05D006616 ORTHO05D008435 2.5e-45 186.0 135 72.6
MELO3C009780.2 Cucumis melo HOM05D006616 ORTHO05D008435 3.3e-45 185.7 163 63.2
RcHm_v2.0_Chr3g0494671 Rosa chinensis HOM05D006616 ORTHO05D008435 4.2e-45 185.3 117 82.1
Lj7A350T24 Lonicera japonica HOM05D006616 ORTHO05D008435 5.5e-45 184.9 126 73.8
CANSAT78G0100 Cannabis sativa HOM05D006616 ORTHO05D008435 7.2e-45 184.5 125 76.8
CAN.G526.15 Capsicum annuum HOM05D006616 ORTHO05D008435 7.2e-45 184.5 125 75.2
Aqoxy3G00148 Aquilegia oxysepala HOM05D006616 ORTHO05D008435 9.5e-45 184.1 123 76.4
FAN19G2668 Fragaria x ananassa HOM05D006616 ORTHO05D008435 9.5e-45 184.1 135 71.1
QL07p014063 Quercus lobata HOM05D006616 ORTHO05D008435 9.5e-45 184.1 125 75.2
HanXRQChr05g0149371 Helianthus annuus HOM05D006616 ORTHO05D008435 1.2e-44 183.7 113 80.5
Lalb_Chr21g0316821 Lupinus albus HOM05D006616 ORTHO05D008435 1.2e-44 183.7 166 62.7
SalBow2G2978 Salvia bowleyana HOM05D006616 ORTHO05D008435 1.2e-44 183.7 155 63.2
CSS0027023 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 1.6e-44 183.3 144 70.1
DCAR_014373 Daucus carota HOM05D006616 ORTHO05D008435 1.6e-44 183.3 126 74.6
VMungo0720G0485 Vigna mungo HOM05D006616 ORTHO05D008435 1.6e-44 183.3 119 77.3
FAN26G1972 Fragaria x ananassa HOM05D006616 ORTHO05D008435 2.1e-44 183.0 117 81.2
arahy.Tifrunner.gnm1.ann1.958W0C Arachis hypogaea HOM05D006616 ORTHO05D008435 3.6e-44 182.2 121 76.9
arahy.Tifrunner.gnm1.ann1.QA0LD5 Arachis hypogaea HOM05D006616 ORTHO05D008435 3.6e-44 182.2 121 76.9
Gohir.A11G305800 Gossypium hirsutum HOM05D006616 ORTHO05D008435 4.7e-44 181.8 118 78.0
Gorai.007G351400 Gossypium raimondii HOM05D006616 ORTHO05D008435 4.7e-44 181.8 118 78.0
PSO478G1375 Papaver somniferum HOM05D006616 ORTHO05D008435 6.1e-44 181.4 146 65.8
Thecc.05G123900 Theobroma cacao HOM05D006616 ORTHO05D008435 6.1e-44 181.4 126 73.0
Potri.006G032200 Populus trichocarpa HOM05D006616 ORTHO05D008435 8.0e-44 181.0 113 80.5
PGR042G1816 Punica granatum HOM05D006616 ORTHO05D008435 8.0e-44 181.0 119 77.3
Lj5g0015037 Lotus japonicus HOM05D006616 ORTHO05D008435 1.0e-43 180.6 121 76.0
Hund19065 Selenicereus undatus HOM05D006616 ORTHO05D008435 1.0e-43 180.6 116 78.4
Migut.N03264 Erythranthe guttata HOM05D006616 ORTHO05D008435 1.4e-43 180.3 158 62.0
Gohir.D11G321200 Gossypium hirsutum HOM05D006616 ORTHO05D008435 1.4e-43 180.3 118 77.1
TWI74G0800 Tripterygium wilfordii HOM05D006616 ORTHO05D008435 2.3e-43 179.5 113 82.3
Cfa019948 Carpinus fangiana HOM05D006616 ORTHO05D008435 3.0e-43 179.1 126 73.8
Nn3g18184 Nelumbo nucifera HOM05D006616 ORTHO05D008435 3.0e-43 179.1 168 57.7
CSS0040058 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 4.0e-43 178.7 139 69.8
Eucgr.A02183 Eucalyptus grandis HOM05D006616 ORTHO05D008435 4.0e-43 178.7 116 77.6
Duzib128G1745 Durio zibethinus HOM05D006616 ORTHO05D008435 5.2e-43 178.3 122 73.8
Sabra06G0021500 Salix brachista HOM05D006616 ORTHO05D008435 5.2e-43 178.3 113 81.4
HPP92_023122 Vanilla planifolia HOM05D006616 ORTHO05D008435 5.2e-43 178.3 115 80.0
Ah.13g077310 Amaranthus hybridus HOM05D006616 ORTHO05D008435 1.2e-42 177.2 166 59.0
Ca_02795_v3 Cicer arietinum L. HOM05D006616 ORTHO05D008435 1.5e-42 176.8 150 64.7
MD00G1150000 Malus domestica HOM05D006616 ORTHO05D008435 1.5e-42 176.8 120 75.0
TPR.G13802 Trifolium pratense HOM05D006616 ORTHO05D008435 2.6e-42 176.0 150 64.7
Phvul.007G243700 Phaseolus vulgaris HOM05D006616 ORTHO05D008435 3.4e-42 175.6 150 63.3
PSO017G2359 Papaver somniferum HOM05D006616 ORTHO05D008435 4.4e-42 175.3 146 63.7
Psat6g087360 Pisum sativum HOM05D006616 ORTHO05D008435 5.7e-42 174.9 121 74.4
THA.LOC104815412 Tarenaya hassleriana HOM05D006616 ORTHO05D008435 5.7e-42 174.9 126 73.8
Medtr1g051155 Medicago truncatula HOM05D006616 ORTHO05D008435 7.5e-42 174.5 174 56.9
EL10Ac3g07308 Beta vulgaris HOM05D006616 ORTHO05D008435 9.8e-42 174.1 117 73.5
Peaxi162Scf00066g00130 Petunia axillaris HOM05D006616 ORTHO05D008435 1.7e-41 173.3 146 63.7
Aa31LG3G1010 Aethionema arabicum HOM05D006616 ORTHO05D008435 6.3e-41 171.4 121 71.9
AUR62018417 Chenopodium quinoa HOM05D006616 ORTHO05D008435 6.3e-41 171.4 117 73.5
AUR62021025 Chenopodium quinoa HOM05D006616 ORTHO05D008435 6.3e-41 171.4 117 73.5
Carub.0004s2335 Capsella rubella HOM05D006616 ORTHO05D008435 1.8e-40 169.9 121 72.7
Thhalv10002504m.g Eutrema salsugineum HOM05D006616 ORTHO05D008435 2.4e-40 169.5 121 72.7
AL4G39000 Arabidopsis lyrata HOM05D006616 ORTHO05D008435 4.1e-40 168.7 121 73.6
Zm00001eb364810 Zea mays HOM05D006616 ORTHO05D008435 4.1e-40 168.7 113 76.1
Os01g0916300 Oryza sativa ssp. japonica HOM05D006616 ORTHO05D008435 2.0e-39 166.4 113 76.1
CARHR136140 Cardamine hirsuta HOM05D006616 ORTHO05D008435 2.7e-39 166.0 121 72.7
Haze_20291 Corylus avellana HOM05D006616 ORTHO05D008435 2.7e-39 166.0 130 69.2
Glyma.02G162000 Glycine max HOM05D006616 ORTHO05D008435 2.7e-39 166.0 94 86.2
unitig_52.g17546 Utricularia gibba HOM05D006616 ORTHO05D008435 1.3e-38 163.7 127 68.5
AT2G41020 Arabidopsis thaliana HOM05D006616 ORTHO05D008435 2.9e-38 162.5 121 71.1
Sp4g23340 Schrenkiella parvula HOM05D006616 ORTHO05D008435 8.6e-38 161.0 118 72.0
BcaC02g12875 Brassica carinata HOM05D006616 ORTHO05D008435 3.3e-37 159.1 118 70.3
C04p68740 Brassica napus HOM05D006616 ORTHO05D008435 3.3e-37 159.1 118 70.3
SMO339G0010 Selaginella moellendorffii HOM05D006616 ORTHO05D008435 1.2e-36 157.1 98 76.5
Solyc11g005110.3 Solanum lycopersicum HOM05D006616 ORTHO05D008435 5.2e-35 151.8 125 65.6
Sopen11g001110 Solanum pennellii HOM05D006616 ORTHO05D008435 5.2e-35 151.8 125 65.6
A04p31340 Brassica napus HOM05D006616 ORTHO05D002641 2.0e-34 149.8 109 70.6
BraA04t18591Z Brassica rapa HOM05D006616 ORTHO05D002641 2.6e-34 149.4 111 69.4
BolC4t28379H Brassica oleracea HOM05D006616 ORTHO05D008435 8.3e-33 144.4 111 67.6
FAN23G2418 Fragaria x ananassa HOM05D006616 ORTHO05D008435 8.3e-33 144.4 82 91.5
Ciclev10011646m.g Citrus clementina HOM05D006616 ORTHO05D008435 1.6e-31 140.2 107 69.2
Nitab4.5_0003863g0020 Nicotiana tabacum HOM05D006616 ORTHO05D008435 1.7e-30 136.7 202 44.1
vmacro00862 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 3.9e-30 135.6 110 69.1
AagrBONN_evm.TU.Sc2ySwM_228.200 Anthoceros agrestis HOM05D006616 ORTHO05D008435 1.8e-27 126.7 102 68.6
Lsat_1_v5_gn_6_110180 Lactuca sativa HOM05D006616 ORTHO05D008435 1.3e-25 120.6 68 88.2
ClCG10G015990 Citrullus lanatus HOM05D006616 ORTHO05D008435 2.2e-25 119.8 68 88.2
FvH4_1g29230 Fragaria vesca HOM05D006616 ORTHO05D008435 6.4e-25 118.2 68 88.2
Nitab4.5_0001168g0150 Nicotiana tabacum HOM05D006616 ORTHO05D008435 2.4e-24 116.3 68 83.8
Migut.C01363 Erythranthe guttata HOM05D006616 ORTHO05D008435 4.9e-17 92.0 111 50.5
Cre12.g527600 Chlamydomonas reinhardtii HOM05D006616 ORTHO05D008435 1.2e-15 87.4 70 58.6
SHI24850 Sapria himalayana HOM05D006616 ORTHO05D008435 7.8e-15 84.7 72 62.5
BcaC02g07966 Brassica carinata HOM05D001681 ORTHO05D001589 1.5e-10 70.5 50 72.0
MBI16_g47221_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 8.4e-09 64.7 120 36.7
MCO09G511 Micromonas commoda HOM05D006616 ORTHO05D008435 1.3e-06 57.4 108 39.8


User provided reference genes

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