Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_15740 Sequoiadendron giganteum HOM05D005643 ORTHO05D006819 1.7e-148 529.3 260 100.0
AagrBONN_evm.TU.Sc2ySwM_117.2790 Anthoceros agrestis HOM05D005643 ORTHO05D006819 1.9e-94 349.7 260 66.9
TAR633G1751 Trochodendron aralioides HOM05D005643 ORTHO05D006819 1.2e-93 347.1 252 67.9
TWI79G0673 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 1.3e-92 343.6 252 66.7
TWI75G1433 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 3.0e-92 342.4 253 66.0
Nn2g10757 Nelumbo nucifera HOM05D005643 ORTHO05D006819 3.3e-91 339.0 253 66.4
arahy.Tifrunner.gnm1.ann1.X5NJ7E Arachis hypogaea HOM05D005643 ORTHO05D006819 1.3e-90 337.0 255 66.3
ATR0115G033 Amborella trichopoda HOM05D005643 ORTHO05D006819 2.8e-90 335.9 253 66.4
Glyma.01G116100 Glycine max HOM05D005643 ORTHO05D006819 4.8e-90 335.1 257 66.1
Gohir.D05G076900 Gossypium hirsutum HOM05D005643 ORTHO05D006819 1.1e-89 334.0 250 65.2
Cfa011331 Carpinus fangiana HOM05D005643 ORTHO05D006819 1.4e-89 333.6 250 64.8
Duzib170G0435 Durio zibethinus HOM05D005643 ORTHO05D006819 1.8e-89 333.2 251 66.1
Duzib170G0739 Durio zibethinus HOM05D005643 ORTHO05D006819 1.8e-89 333.2 251 66.1
Atru.chr3.3643 Acer truncatum HOM05D005643 ORTHO05D006819 2.4e-89 332.8 255 64.7
Gohir.A05G074000 Gossypium hirsutum HOM05D005643 ORTHO05D006819 3.1e-89 332.4 250 65.2
Gorai.009G078300 Gossypium raimondii HOM05D005643 ORTHO05D006819 3.1e-89 332.4 250 64.8
Oeu059095.1 Olea europaea HOM05D005643 ORTHO05D006819 3.1e-89 332.4 253 65.6
Aqoxy1G03172 Aquilegia oxysepala HOM05D005643 ORTHO05D006819 4.0e-89 332.0 251 64.9
Nitab4.5_0006757g0010 Nicotiana tabacum HOM05D005643 ORTHO05D006819 4.0e-89 332.0 252 67.1
Prupe.6G100100 Prunus persica HOM05D005643 ORTHO05D006819 4.0e-89 332.0 250 66.0
Eucgr.B02489 Eucalyptus grandis HOM05D005643 ORTHO05D006819 6.9e-89 331.3 250 63.2
CAN.G1001.26 Capsicum annuum HOM05D005643 ORTHO05D006819 9.0e-89 330.9 252 66.3
FvH4_3g32570 Fragaria vesca HOM05D005643 ORTHO05D006819 9.0e-89 330.9 251 64.5
Glyma.03G060100 Glycine max HOM05D005643 ORTHO05D006819 9.0e-89 330.9 253 65.6
Medtr4g015590 Medicago truncatula HOM05D005643 ORTHO05D006819 9.0e-89 330.9 254 66.5
Rhsim13G0093700 Rhododendron simsii HOM05D005643 ORTHO05D006819 1.2e-88 330.5 254 65.0
Peaxi162Scf00270g00108 Petunia axillaris HOM05D005643 ORTHO05D006819 1.5e-88 330.1 251 66.5
Psat7g245880 Pisum sativum HOM05D005643 ORTHO05D006819 1.5e-88 330.1 254 66.1
TPR.G13337 Trifolium pratense HOM05D005643 ORTHO05D006819 1.5e-88 330.1 254 66.5
Lj3g0018588 Lotus japonicus HOM05D005643 ORTHO05D006819 2.0e-88 329.7 250 66.0
Lalb_Chr19g0124481 Lupinus albus HOM05D005643 ORTHO05D006819 2.6e-88 329.3 250 63.6
Thecc.09G257100 Theobroma cacao HOM05D005643 ORTHO05D006819 3.4e-88 328.9 250 65.2
CAN.G631.16 Capsicum annuum HOM05D005643 ORTHO05D006819 4.5e-88 328.6 250 66.0
Dinv32759 Davidia involucrata HOM05D005643 ORTHO05D006819 5.8e-88 328.2 255 65.9
Duzib150G0959 Durio zibethinus HOM05D005643 ORTHO05D006819 5.8e-88 328.2 250 64.8
GSVIVG01025172001 Vitis vinifera HOM05D005643 ORTHO05D006819 5.8e-88 328.2 252 64.3
Phvul.010G001900 Phaseolus vulgaris HOM05D005643 ORTHO05D006819 9.9e-88 327.4 250 63.2
FAN11G2689 Fragaria x ananassa HOM05D005643 ORTHO05D006819 1.3e-87 327.0 254 63.0
Sopen11g028020 Solanum pennellii HOM05D005643 ORTHO05D006819 1.7e-87 326.6 252 65.9
PGSC0003DMG400008060 Solanum tuberosum HOM05D005643 ORTHO05D006819 1.7e-87 326.6 252 65.9
Solyc11g069290.2 Solanum lycopersicum HOM05D005643 ORTHO05D006819 2.2e-87 326.2 252 65.9
Sabra09G0008500 Salix brachista HOM05D005643 ORTHO05D006819 2.9e-87 325.9 251 62.9
Ciclev10029093m.g Citrus clementina HOM05D005643 ORTHO05D006819 4.9e-87 325.1 227 68.7
SalBow5G2340 Salvia bowleyana HOM05D005643 ORTHO05D006819 6.4e-87 324.7 252 65.1
Migut.D02210 Erythranthe guttata HOM05D005643 ORTHO05D006819 8.4e-87 324.3 250 63.2
Migut.D02214 Erythranthe guttata HOM05D005643 ORTHO05D006819 8.4e-87 324.3 250 63.2
QL01p022418 Quercus lobata HOM05D005643 ORTHO05D006819 8.4e-87 324.3 252 64.7
HanXRQChr01g0018371 Helianthus annuus HOM05D005643 ORTHO05D006819 1.1e-86 323.9 257 63.0
Potri.009G012700 Populus trichocarpa HOM05D005643 ORTHO05D006819 1.1e-86 323.9 252 63.5
Cc01_g11250 Coffea canephora HOM05D005643 ORTHO05D006819 2.4e-86 322.8 253 63.2
PGR102G1730 Punica granatum HOM05D005643 ORTHO05D006819 3.2e-86 322.4 250 64.4
CiPaw.13G111900 Carya illinoinensis HOM05D005643 ORTHO05D006819 4.2e-86 322.0 249 64.7
ECA248G1947 Erigeron canadensis HOM05D005643 ORTHO05D006819 4.2e-86 322.0 254 62.6
FAN16G3648 Fragaria x ananassa HOM05D005643 ORTHO05D006819 4.2e-86 322.0 256 63.3
AL8G37130 Arabidopsis lyrata HOM05D005643 ORTHO05D006819 5.5e-86 321.6 262 62.2
Carub.0008s2123 Capsella rubella HOM05D005643 ORTHO05D006819 5.5e-86 321.6 257 63.0
AT5G60540 Arabidopsis thaliana HOM05D005643 ORTHO05D006819 7.1e-86 321.2 262 62.2
Manes.04G022200 Manihot esculenta HOM05D005643 ORTHO05D006819 7.1e-86 321.2 254 62.6
RcHm_v2.0_Chr5g0059641 Rosa chinensis HOM05D005643 ORTHO05D006819 9.3e-86 320.9 263 61.2
Mapoly0081s0077 Marchantia polymorpha HOM05D005643 ORTHO05D006819 1.2e-85 320.5 258 62.8
arahy.Tifrunner.gnm1.ann1.9U2L6D Arachis hypogaea HOM05D005643 ORTHO05D006819 1.6e-85 320.1 249 62.7
MELO3C025766.2 Cucumis melo HOM05D005643 ORTHO05D006819 2.1e-85 319.7 250 64.4
HPP92_025849 Vanilla planifolia HOM05D005643 ORTHO05D006819 2.1e-85 319.7 252 61.9
unitig_0.g1517 Utricularia gibba HOM05D005643 ORTHO05D006819 4.6e-85 318.5 249 62.7
Sc06g0010070 Simmondsia chinensis HOM05D005643 ORTHO05D006819 1.3e-84 317.0 251 61.0
Sed0015117 Sechium edule HOM05D005643 ORTHO05D006819 1.8e-84 316.6 250 64.0
FAN21G1883 Fragaria x ananassa HOM05D005643 ORTHO05D006819 2.3e-84 316.2 269 59.9
Aa31LG1G12530 Aethionema arabicum HOM05D005643 ORTHO05D006819 5.1e-84 315.1 254 63.4
Sp6g22110 Schrenkiella parvula HOM05D005643 ORTHO05D006819 5.1e-84 315.1 256 62.9
SGA_v2.0_scaffold97G29210 Striga asiatica HOM05D005643 ORTHO05D006819 6.7e-84 314.7 255 62.0
THA.LOC104814830 Tarenaya hassleriana HOM05D005643 ORTHO05D006819 6.7e-84 314.7 254 62.2
MSTRG.21131 Avicennia marina HOM05D005643 ORTHO05D006819 1.5e-83 313.5 252 62.3
A10p17720 Brassica napus HOM05D005643 ORTHO05D006819 2.5e-83 312.8 254 61.4
BraA10t43851Z Brassica rapa HOM05D005643 ORTHO05D006819 2.5e-83 312.8 254 61.4
DCAR_006056 Daucus carota HOM05D005643 ORTHO05D006819 3.3e-83 312.4 250 61.6
Nitab4.5_0000650g0110 Nicotiana tabacum HOM05D005643 ORTHO05D006819 3.3e-83 312.4 275 60.7
C09p53180 Brassica napus HOM05D005643 ORTHO05D006819 4.3e-83 312.0 257 61.9
BolC9t58193H Brassica oleracea HOM05D005643 ORTHO05D006819 4.3e-83 312.0 257 61.9
CARHR274200 Cardamine hirsuta HOM05D005643 ORTHO05D006819 4.3e-83 312.0 261 60.5
Os02g0130100 Oryza sativa ssp. japonica HOM05D005643 ORTHO05D006819 4.3e-83 312.0 254 62.6
Lj1A190T89 Lonicera japonica HOM05D005643 ORTHO05D006819 5.6e-83 311.6 255 62.0
PSO384G4957 Papaver somniferum HOM05D005643 ORTHO05D006819 9.6e-83 310.8 254 61.8
MBI07_g41453_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 1.3e-82 310.5 236 64.8
PSO339G3071 Papaver somniferum HOM05D005643 ORTHO05D006819 1.6e-82 310.1 253 60.9
BcaB08g36348 Brassica carinata HOM05D005643 ORTHO05D006819 2.1e-82 309.7 257 61.5
CsaV3_6G013840 Cucumis sativus L. HOM05D005643 ORTHO05D006819 2.1e-82 309.7 248 63.3
Pp3c19_5510 Physcomitrium patens HOM05D005643 ORTHO05D006819 2.1e-82 309.7 263 61.2
Thhalv10014160m.g Eutrema salsugineum HOM05D005643 ORTHO05D006819 4.8e-82 308.5 225 65.8
arahy.Tifrunner.gnm1.ann1.QSC7KM Arachis hypogaea HOM05D005643 ORTHO05D006819 6.2e-82 308.1 305 55.4
BolC2t07247H Brassica oleracea HOM05D005643 ORTHO05D006819 1.4e-81 307.0 225 67.1
MD11G1133800 Malus domestica HOM05D005643 ORTHO05D006819 5.3e-81 305.1 269 59.5
EL10Ac9g22501 Beta vulgaris HOM05D005643 ORTHO05D006819 3.4e-80 302.4 225 63.6
AUR62039626 Chenopodium quinoa HOM05D005643 ORTHO05D006819 4.5e-80 302.0 254 58.7
VMungo0331G1810 Vigna mungo HOM05D005643 ORTHO05D006819 4.5e-80 302.0 237 62.4
Pp3c18_20140 Physcomitrium patens HOM05D005643 ORTHO05D006819 2.9e-79 299.3 262 59.5
AUR62024993 Chenopodium quinoa HOM05D005643 ORTHO05D006819 4.9e-79 298.5 254 58.3
Lalb_Chr03g0043331 Lupinus albus HOM05D005643 ORTHO05D006819 8.4e-79 297.7 237 60.8
Hma1.2p1_1030F.1_g249820 Hydrangea macrophylla HOM05D005643 ORTHO05D006819 2.5e-78 296.2 235 61.3
Lsat_1_v5_gn_1_65480 Lactuca sativa HOM05D005643 ORTHO05D006819 2.7e-77 292.7 253 59.3
SMO364G0700 Selaginella moellendorffii HOM05D005643 ORTHO05D006819 2.7e-77 292.7 252 58.7
MD03G1113000 Malus domestica HOM05D005643 ORTHO05D006819 5.1e-76 288.5 230 62.6
Nn2g13073 Nelumbo nucifera HOM05D001952 ORTHO05D005047 2.6e-72 276.2 187 70.1
BcaB08g36349 Brassica carinata HOM05D005643 ORTHO05D006819 3.4e-72 275.8 233 60.1
Actinidia24093 Actinidia chinensis HOM05D005643 ORTHO05D006819 6.1e-69 265.0 201 63.2
Actinidia03737 Actinidia chinensis HOM05D005643 ORTHO05D006819 7.4e-67 258.1 203 62.6
CBR_g31179 Chara braunii HOM05D005643 ORTHO05D006819 1.3e-66 257.3 254 53.5
Zm00001eb208970 Zea mays HOM05D005643 ORTHO05D006819 3.7e-66 255.8 161 77.0
Cre03.g167051 Chlamydomonas reinhardtii HOM05D005643 ORTHO05D006819 5.3e-65 251.9 216 59.3
CSS0039600 Camellia sinensis var. sinensis HOM05D005643 ORTHO05D006819 2.0e-64 250.0 256 54.3
arahy.Tifrunner.gnm1.ann1.J7FTHV Arachis hypogaea HOM05D005643 ORTHO05D006819 4.2e-62 242.3 232 54.3
C02p11600 Brassica napus HOM05D005643 ORTHO05D006819 2.3e-60 236.5 175 65.1
Oeu002854.1 Olea europaea HOM05D005643 ORTHO05D006819 6.7e-60 235.0 190 61.1
Ca_09130_v3 Cicer arietinum L. HOM05D005643 ORTHO05D006819 1.1e-59 234.2 186 63.4
MCO05G014 Micromonas commoda HOM05D005643 ORTHO05D006819 4.4e-59 232.3 222 55.0
MD03G1113200 Malus domestica HOM05D005643 ORTHO05D006819 4.1e-57 225.7 184 61.4
MBI07_g42630_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 3.4e-56 222.6 217 54.8
vmacro03191 Vaccinium macrocarpon HOM05D005643 ORTHO05D006819 6.5e-55 218.4 253 48.6
BcaC03g13961 Brassica carinata HOM05D005643 ORTHO05D006819 1.0e-44 184.5 167 53.9
Lj2A1030T57 Lonicera japonica HOM05D005643 ORTHO05D006819 1.0e-44 184.5 115 73.9
BcaC04g19711 Brassica carinata HOM05D005643 ORTHO05D006819 4.4e-43 179.1 257 44.4
TAR636G3455 Trochodendron aralioides HOM05D005643 ORTHO05D006819 2.7e-40 169.9 101 74.3
Oeu002855.1 Olea europaea HOM05D005643 ORTHO05D006819 3.6e-37 159.5 147 55.1
Cfa022863 Carpinus fangiana HOM05D005643 ORTHO05D006819 1.8e-36 157.1 263 38.0
Haze_23864 Corylus avellana HOM05D005643 ORTHO05D006819 4.4e-35 152.5 139 55.4
CiPaw.13G111500 Carya illinoinensis HOM05D005643 ORTHO05D006819 1.2e-29 134.4 138 52.9
Rhsim06G0101300 Rhododendron simsii HOM05D005643 ORTHO05D006819 1.7e-26 124.0 78 73.1
BraA02t05718Z Brassica rapa HOM05D005643 ORTHO05D006819 1.2e-24 117.9 65 78.5
SHI06096 Sapria himalayana HOM05D005643 ORTHO05D006819 2.9e-23 113.2 136 47.1
Cpa.g.sc216.17 Carica papaya HOM05D005643 ORTHO05D006819 5.2e-20 102.4 57 80.7
SHI06095 Sapria himalayana HOM05D005643 ORTHO05D006819 1.4e-17 94.4 70 61.4
Lj2A1030T58 Lonicera japonica HOM05D005643 ORTHO05D006819 2.1e-13 80.5 76 57.9
TAR636G0837 Trochodendron aralioides HOM05D005643 ORTHO05D006819 2.8e-13 80.1 79 54.4
Dinv12496 Davidia involucrata HOM05D005643 ORTHO05D006819 3.6e-13 79.7 78 55.1
ClCG02G021090 Citrullus lanatus HOM05D005643 ORTHO05D006819 8.0e-13 78.6 73 56.2
Cpa.g.sc216.18 Carica papaya HOM05D005643 ORTHO05D006819 1.4e-09 67.8 37 78.4
PRCOL_00006457 Prasinoderma coloniale HOM05D005643 ORTHO05D006819 5.4e-09 65.9 101 38.6
Rhsim13G0093600 Rhododendron simsii HOM05D000699 ORTHO05D000519 5.4e-09 65.9 35 82.9
TAR005G0002 Trochodendron aralioides HOM05D005643 ORTHO05D006819 6.0e-08 62.4 70 48.6
MBI07_g43742_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 1.0e-07 61.6 77 53.2
SHI06094 Sapria himalayana HOM05D000105 ORTHO05D000023 1.0e-07 61.6 59 55.9


User provided reference genes

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