Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_15532 Sequoiadendron giganteum HOM05D000278 ORTHO05D004031 7.6e-52 206.8 101 100.0
TAR623G0935 Trochodendron aralioides HOM05D000278 ORTHO05D004031 3.7e-14 81.6 50 76.0
MSTRG.26066 Avicennia marina HOM05D000278 ORTHO05D004031 6.3e-14 80.9 50 76.0
DCAR_019879 Daucus carota HOM05D000278 ORTHO05D004031 8.2e-14 80.5 50 74.0
Migut.J01891 Erythranthe guttata HOM05D000278 ORTHO05D004031 1.4e-13 79.7 50 76.0
Hma1.2p1_1145F.1_g261380 Hydrangea macrophylla HOM05D000278 ORTHO05D004031 1.4e-13 79.7 50 74.0
Prupe.3G113600 Prunus persica HOM05D000278 ORTHO05D004031 1.4e-13 79.7 50 72.0
Prupe.3G114000 Prunus persica HOM05D000278 ORTHO05D004031 1.4e-13 79.7 50 72.0
Zm00001eb200400 Zea mays HOM05D000278 ORTHO05D004031 1.4e-13 79.7 50 74.0
Ca_04492_v3 Cicer arietinum L. HOM05D000278 ORTHO05D004031 1.8e-13 79.3 50 74.0
Nn6g34503 Nelumbo nucifera HOM05D000278 ORTHO05D004031 1.8e-13 79.3 55 70.9
Dinv14581 Davidia involucrata HOM05D000278 ORTHO05D004031 2.4e-13 79.0 50 74.0
Nn7g35821 Nelumbo nucifera HOM05D000278 ORTHO05D004031 2.4e-13 79.0 50 76.0
Dinv37012 Davidia involucrata HOM05D000278 ORTHO05D004031 3.1e-13 78.6 50 72.0
Migut.C00324 Erythranthe guttata HOM05D000278 ORTHO05D004031 3.1e-13 78.6 50 74.0
PSO384G2052 Papaver somniferum HOM05D000278 ORTHO05D004031 3.1e-13 78.6 50 74.0
SalBow1G8202 Salvia bowleyana HOM05D000278 ORTHO05D004031 3.1e-13 78.6 50 74.0
SalBow8G1634 Salvia bowleyana HOM05D000278 ORTHO05D004031 3.1e-13 78.6 50 74.0
TAR369G0685 Trochodendron aralioides HOM05D000278 ORTHO05D004031 3.1e-13 78.6 50 74.0
FvH4_6g27660 Fragaria vesca HOM05D000278 ORTHO05D004031 4.1e-13 78.2 50 72.0
FAN02G2614 Fragaria x ananassa HOM05D000278 ORTHO05D004031 4.1e-13 78.2 50 72.0
FAN05G2827 Fragaria x ananassa HOM05D000278 ORTHO05D004031 4.1e-13 78.2 50 72.0
FAN09G2390 Fragaria x ananassa HOM05D000278 ORTHO05D004031 4.1e-13 78.2 50 72.0
FAN14G1825 Fragaria x ananassa HOM05D000278 ORTHO05D004031 4.1e-13 78.2 50 72.0
Medtr6g032870 Medicago truncatula HOM05D000278 ORTHO05D004031 4.1e-13 78.2 50 74.0
Psat0s3407g0040 Pisum sativum HOM05D000278 ORTHO05D004031 4.1e-13 78.2 50 74.0
Lalb_Chr21g0316131 Lupinus albus HOM05D000278 ORTHO05D004031 5.3e-13 77.8 50 72.0
Lalb_Chr21g0316151 Lupinus albus HOM05D000278 ORTHO05D004031 5.3e-13 77.8 50 72.0
MD09G1235600 Malus domestica HOM05D000278 ORTHO05D004031 5.3e-13 77.8 50 70.0
MD17G1264300 Malus domestica HOM05D000278 ORTHO05D004031 5.3e-13 77.8 50 70.0
Manes.09G141800 Manihot esculenta HOM05D000278 ORTHO05D004031 5.3e-13 77.8 50 72.0
Nitab4.5_0002187g0060 Nicotiana tabacum HOM05D000278 ORTHO05D004031 5.3e-13 77.8 50 72.0
Nitab4.5_0006695g0030 Nicotiana tabacum HOM05D000278 ORTHO05D004031 5.3e-13 77.8 50 72.0
Os03g0804800 Oryza sativa ssp. japonica HOM05D000278 ORTHO05D004031 5.3e-13 77.8 50 70.0
QL07p019694 Quercus lobata HOM05D000278 ORTHO05D004031 7.0e-13 77.4 50 72.0
HPP92_017517 Vanilla planifolia HOM05D000278 ORTHO05D004031 7.0e-13 77.4 50 72.0
ATR0697G160 Amborella trichopoda HOM05D000278 ORTHO05D004031 9.1e-13 77.0 50 74.0
AagrBONN_evm.TU.Sc2ySwM_117.3360 Anthoceros agrestis HOM05D000278 ORTHO05D004031 9.1e-13 77.0 76 53.9
CSS0000727 Camellia sinensis var. sinensis HOM05D000278 ORTHO05D004031 9.1e-13 77.0 50 72.0
CSS0033021 Camellia sinensis var. sinensis HOM05D000278 ORTHO05D004031 9.1e-13 77.0 50 72.0
CSS0036387 Camellia sinensis var. sinensis HOM05D000278 ORTHO05D004031 9.1e-13 77.0 50 72.0
CAN.G410.8 Capsicum annuum HOM05D000278 ORTHO05D004031 9.1e-13 77.0 50 72.0
Rhsim01G0190500 Rhododendron simsii HOM05D000278 ORTHO05D004031 9.1e-13 77.0 50 70.0
Rhsim03G0001500 Rhododendron simsii HOM05D000278 ORTHO05D004031 9.1e-13 77.0 50 70.0
Atru.chr2.1362 Acer truncatum HOM05D000278 ORTHO05D004031 1.2e-12 76.6 50 72.0
Actinidia22085 Actinidia chinensis HOM05D000278 ORTHO05D004031 1.2e-12 76.6 50 72.0
CDE01G0608 Ceratophyllum demersum HOM05D000278 ORTHO05D004031 1.2e-12 76.6 50 72.0
CDE05G1661 Ceratophyllum demersum HOM05D000278 ORTHO05D004031 1.2e-12 76.6 50 72.0
Ciclev10019583m.g Citrus clementina HOM05D000278 ORTHO05D004031 1.2e-12 76.6 50 72.0
QL07p030356 Quercus lobata HOM05D000278 ORTHO05D004031 1.2e-12 76.6 50 72.0
RcHm_v2.0_Chr2g0130701 Rosa chinensis HOM05D000278 ORTHO05D004031 1.2e-12 76.6 50 68.0
Glyma.16G153200 Glycine max HOM05D000278 ORTHO05D004031 1.6e-12 76.3 50 68.0
Lj1A1137T80 Lonicera japonica HOM05D000278 ORTHO05D004031 1.6e-12 76.3 50 72.0
PSO339G2052 Papaver somniferum HOM05D000278 ORTHO05D004031 1.6e-12 76.3 50 72.0
Peaxi162Scf00071g00913 Petunia axillaris HOM05D000278 ORTHO05D004031 1.6e-12 76.3 50 70.0
Pp3c15_13410 Physcomitrium patens HOM05D000278 ORTHO05D004031 1.6e-12 76.3 50 74.0
Pp3c15_13420 Physcomitrium patens HOM05D000278 ORTHO05D004031 1.6e-12 76.3 50 74.0
Sed0026355 Sechium edule HOM05D000278 ORTHO05D004031 1.6e-12 76.3 50 72.0
TPR.G36870 Trifolium pratense HOM05D000278 ORTHO05D004031 1.6e-12 76.3 50 72.0
COL.COLO4_13606 Corchorus olitorius HOM05D000278 ORTHO05D004031 2.0e-12 75.9 50 74.0
Manes.08G143700 Manihot esculenta HOM05D000278 ORTHO05D004031 2.0e-12 75.9 50 72.0
GSVIVG01033394001 Vitis vinifera HOM05D000278 ORTHO05D004031 2.0e-12 75.9 50 70.0
Aqoxy2G00582 Aquilegia oxysepala HOM05D000278 ORTHO05D004031 2.6e-12 75.5 50 72.0
CSS0002970 Camellia sinensis var. sinensis HOM05D000278 ORTHO05D004031 2.6e-12 75.5 50 70.0
Lj8A582T9 Lonicera japonica HOM05D000278 ORTHO05D004031 2.6e-12 75.5 50 72.0
Solyc01g088080.3 Solanum lycopersicum HOM05D000278 ORTHO05D004031 2.6e-12 75.5 50 72.0
Sopen01g034950 Solanum pennellii HOM05D000278 ORTHO05D004031 2.6e-12 75.5 50 72.0
PGSC0003DMG400006829 Solanum tuberosum HOM05D000278 ORTHO05D004031 2.6e-12 75.5 50 72.0
Cfa016437 Carpinus fangiana HOM05D000278 ORTHO05D004031 3.5e-12 75.1 50 72.0
Cc06_g22900 Coffea canephora HOM05D000278 ORTHO05D004031 3.5e-12 75.1 50 72.0
Duzib106G1656 Durio zibethinus HOM05D000278 ORTHO05D004031 3.5e-12 75.1 50 70.0
Duzib177G1081 Durio zibethinus HOM05D000278 ORTHO05D004031 3.5e-12 75.1 50 70.0
Medtr1g030650 Medicago truncatula HOM05D000278 ORTHO05D004031 3.5e-12 75.1 50 68.0
Oeu012404.4 Olea europaea HOM05D000278 ORTHO05D004031 3.5e-12 75.1 50 70.0
ClCG10G013350 Citrullus lanatus HOM05D000278 ORTHO05D004031 4.5e-12 74.7 50 70.0
MELO3C026888.2 Cucumis melo HOM05D000278 ORTHO05D004031 4.5e-12 74.7 50 70.0
MD17G1264600 Malus domestica HOM05D000278 ORTHO05D004031 4.5e-12 74.7 50 68.0
Psat0s2522g0160 Pisum sativum HOM05D000278 ORTHO05D004031 4.5e-12 74.7 50 72.0
Hund19239 Selenicereus undatus HOM05D000278 ORTHO05D004031 4.5e-12 74.7 48 75.0
Thecc.05G294000 Theobroma cacao HOM05D000278 ORTHO05D004031 4.5e-12 74.7 50 70.0
TPR.G34618 Trifolium pratense HOM05D000278 ORTHO05D004031 4.5e-12 74.7 50 70.0
vmacro12568 Vaccinium macrocarpon HOM05D000278 ORTHO05D004031 4.5e-12 74.7 50 70.0
Gohir.A11G258900 Gossypium hirsutum HOM05D000278 ORTHO05D004031 5.9e-12 74.3 50 72.0
Gohir.A11G296700 Gossypium hirsutum HOM05D000278 ORTHO05D004031 5.9e-12 74.3 50 72.0
Gohir.D11G310200 Gossypium hirsutum HOM05D000278 ORTHO05D004031 5.9e-12 74.3 50 72.0
Gohir.D11G312410 Gossypium hirsutum HOM05D000278 ORTHO05D004031 5.9e-12 74.3 50 72.0
Gorai.007G288800 Gossypium raimondii HOM05D000278 ORTHO05D004031 5.9e-12 74.3 50 72.0
Gorai.007G343600 Gossypium raimondii HOM05D000278 ORTHO05D004031 5.9e-12 74.3 50 72.0
Potri.019G034200 Populus trichocarpa HOM05D000278 ORTHO05D004031 5.9e-12 74.3 50 70.0
Sabra19G0042100 Salix brachista HOM05D000278 ORTHO05D004031 5.9e-12 74.3 50 70.0
TWI32G0619 Tripterygium wilfordii HOM05D000278 ORTHO05D004031 5.9e-12 74.3 50 70.0
Haze_19414 Corylus avellana HOM05D000278 ORTHO05D004031 7.7e-12 73.9 50 72.0
Gohir.D11G269000 Gossypium hirsutum HOM05D000278 ORTHO05D004031 7.7e-12 73.9 50 72.0
Potri.013G058500 Populus trichocarpa HOM05D000278 ORTHO05D004031 7.7e-12 73.9 50 72.0
Sabra13G0052100 Salix brachista HOM05D000278 ORTHO05D004031 7.7e-12 73.9 50 70.0
AL6G29410 Arabidopsis lyrata HOM05D000278 ORTHO05D004031 1.0e-11 73.6 50 70.0
AUR62032060 Chenopodium quinoa HOM05D000278 ORTHO05D004031 1.0e-11 73.6 50 70.0
AUR62032687 Chenopodium quinoa HOM05D000278 ORTHO05D004031 1.0e-11 73.6 50 70.0
VMungo0464G1078 Vigna mungo HOM05D000278 ORTHO05D004031 1.0e-11 73.6 50 66.0
Lj1g0028009 Lotus japonicus HOM05D000278 ORTHO05D004031 1.3e-11 73.2 48 68.8
Mapoly0052s0054 Marchantia polymorpha HOM05D000278 ORTHO05D004031 1.3e-11 73.2 50 72.0
PGR142G1170 Punica granatum HOM05D000278 ORTHO05D004031 1.3e-11 73.2 50 68.0
Ah.13g075330 Amaranthus hybridus HOM05D000278 ORTHO05D004031 1.7e-11 72.8 59 61.0
CiPaw.06G089700 Carya illinoinensis HOM05D000278 ORTHO05D004031 1.7e-11 72.8 50 68.0
CiPaw.09G001600 Carya illinoinensis HOM05D000278 ORTHO05D004031 1.7e-11 72.8 50 68.0
Glyma.02G071900 Glycine max HOM05D000278 ORTHO05D004031 1.7e-11 72.8 50 66.0
Phvul.004G079800 Phaseolus vulgaris HOM05D000278 ORTHO05D004031 1.7e-11 72.8 50 66.0
MSTRG.10861 Avicennia marina HOM05D000278 ORTHO05D004031 2.2e-11 72.4 49 69.4
CsaV3_3G043280 Cucumis sativus L. HOM05D000278 ORTHO05D004031 2.2e-11 72.4 50 68.0
TWI34G1951 Tripterygium wilfordii HOM05D000278 ORTHO05D004031 2.2e-11 72.4 50 68.0
Ca_25711_v3 Cicer arietinum L. HOM05D000278 ORTHO05D004031 2.9e-11 72.0 48 66.7
unitig_899.g15071 Utricularia gibba HOM05D000861 ORTHO05D004031 2.9e-11 72.0 50 64.0
Lsat_1_v5_gn_4_42920 Lactuca sativa HOM05D000278 ORTHO05D004031 3.8e-11 71.6 50 70.0
SMO353G0351 Selaginella moellendorffii HOM05D000278 ORTHO05D004031 3.8e-11 71.6 50 70.0
CANSAT25G3570 Cannabis sativa HOM05D000278 ORTHO05D004031 5.0e-11 71.2 50 66.0
Rhsim03G0008300 Rhododendron simsii HOM05D000278 ORTHO05D004031 5.0e-11 71.2 48 66.7
THA.LOC104802866 Tarenaya hassleriana HOM05D000278 ORTHO05D004031 5.0e-11 71.2 58 63.8
Aa31LG5G14540 Aethionema arabicum HOM05D000278 ORTHO05D004031 6.5e-11 70.9 48 70.8
AL3G13870 Arabidopsis lyrata HOM05D000278 ORTHO05D004031 6.5e-11 70.9 58 63.8
Carub.0003s0321 Capsella rubella HOM05D000278 ORTHO05D004031 6.5e-11 70.9 58 63.8
Thhalv10020448m.g Eutrema salsugineum HOM05D000278 ORTHO05D004031 6.5e-11 70.9 58 63.8
Sp3g02930 Schrenkiella parvula HOM05D000278 ORTHO05D004031 6.5e-11 70.9 58 63.8
Actinidia30554 Actinidia chinensis HOM05D000278 ORTHO05D004031 8.5e-11 70.5 55 63.6
EL10Ac3g06816 Beta vulgaris HOM05D000278 ORTHO05D004031 1.1e-10 70.1 50 66.0
EL10Ac5g12659 Beta vulgaris HOM05D000278 ORTHO05D004031 1.1e-10 70.1 50 66.0
BcaC05g30238 Brassica carinata HOM05D000278 ORTHO05D004031 1.1e-10 70.1 51 64.7
BcaC09g47768 Brassica carinata HOM05D000278 ORTHO05D004031 1.1e-10 70.1 48 68.8
BolC1t05791H Brassica oleracea HOM05D000278 ORTHO05D004031 1.1e-10 70.1 48 68.8
BolC1t05795H Brassica oleracea HOM05D000278 ORTHO05D004031 1.1e-10 70.1 48 68.8
BolC3t16333H Brassica oleracea HOM05D000278 ORTHO05D004031 1.1e-10 70.1 48 68.8
BraA01t04547Z Brassica rapa HOM05D000278 ORTHO05D004031 1.1e-10 70.1 48 68.8
SGA_v2.0_scaffold274G46518 Striga asiatica HOM05D000278 ORTHO05D004031 1.1e-10 70.1 61 62.3
Eucgr.A02095 Eucalyptus grandis HOM05D000278 ORTHO05D004031 1.5e-10 69.7 50 64.0
Hund24837 Selenicereus undatus HOM05D000278 ORTHO05D004031 1.5e-10 69.7 46 67.4
THA.LOC104820734 Tarenaya hassleriana HOM05D000278 ORTHO05D004031 1.5e-10 69.7 58 62.1
AT3G03960 Arabidopsis thaliana HOM05D000278 ORTHO05D004031 1.9e-10 69.3 58 62.1
ECA232G4643 Erigeron canadensis HOM05D000278 ORTHO05D004031 1.9e-10 69.3 51 68.6
BcaC05g29888 Brassica carinata HOM05D000278 ORTHO05D004031 2.5e-10 68.9 48 66.7
BcaC05g30297 Brassica carinata HOM05D000278 ORTHO05D004031 2.5e-10 68.9 48 66.7
A05p43400 Brassica napus HOM05D000278 ORTHO05D004031 2.5e-10 68.9 48 66.7
C05p63100 Brassica napus HOM05D000278 ORTHO05D004031 2.5e-10 68.9 48 66.7
BolC5t34962H Brassica oleracea HOM05D000278 ORTHO05D004031 2.5e-10 68.9 48 66.7
BcaNung04528 Brassica carinata HOM05D000278 ORTHO05D004031 3.2e-10 68.6 48 66.7
BraA05t23080Z Brassica rapa HOM05D000278 ORTHO05D004031 3.2e-10 68.6 48 64.6
HanXRQChr08g0227471 Helianthus annuus HOM05D000278 ORTHO05D004031 3.2e-10 68.6 51 68.6
Sc13g0002700 Simmondsia chinensis HOM05D000278 ORTHO05D004031 3.2e-10 68.6 48 66.7
A01p41240 Brassica napus HOM05D000278 ORTHO05D004031 4.2e-10 68.2 48 66.7
A03p33480 Brassica napus HOM05D000278 ORTHO05D004031 4.2e-10 68.2 48 66.7
BNapus_Darmor_BZH_scaffold_78p00470 Brassica napus HOM05D000278 ORTHO05D004031 4.2e-10 68.2 48 66.7
C03p40680 Brassica napus HOM05D000278 ORTHO05D004031 4.2e-10 68.2 48 66.7
BraA03t12523Z Brassica rapa HOM05D000278 ORTHO05D004031 4.2e-10 68.2 48 66.7
CARHR078090 Cardamine hirsuta HOM05D000278 ORTHO05D004031 4.2e-10 68.2 58 62.1
CBR_g26488 Chara braunii HOM05D000278 ORTHO05D004031 2.7e-09 65.5 48 64.6
QL07p030735 Quercus lobata HOM05D000278 ORTHO05D004031 6.1e-09 64.3 50 66.0
CSS0030797 Camellia sinensis var. sinensis HOM05D000278 ORTHO05D004031 1.0e-08 63.5 43 67.4
PRCOL_00000219 Prasinoderma coloniale HOM05D000278 ORTHO05D004031 1.8e-08 62.8 50 60.0
Cc02_g37620 Coffea canephora HOM05D000278 ORTHO05D004031 3.0e-08 62.0 50 58.0
MCO11G566 Micromonas commoda HOM05D000278 ORTHO05D004031 4.0e-08 61.6 50 56.0
Cre03.g168450 Chlamydomonas reinhardtii HOM05D000278 ORTHO05D004031 6.3e-06 54.3 52 50.0
Sed0013215 Sechium edule HOM05D000278 ORTHO05D004031 6.3e-06 54.3 50 64.0


User provided reference genes

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