Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_15002 Sequoiadendron giganteum HOM05D003114 ORTHO05D003519 2.9e-76 288.5 146 100.0
PGR083G1829 Punica granatum HOM05D003114 ORTHO05D003519 7.9e-34 147.5 143 52.4
HPP92_017781 Vanilla planifolia HOM05D003114 ORTHO05D003519 1.0e-33 147.1 90 71.1
Lj1g0027709 Lotus japonicus HOM05D003114 ORTHO05D003519 1.4e-33 146.7 141 53.2
PSO170G0663 Papaver somniferum HOM05D003114 ORTHO05D003519 1.8e-33 146.4 140 52.1
PSO700G0395 Papaver somniferum HOM05D003114 ORTHO05D003519 1.8e-33 146.4 140 52.1
ECA247G0467 Erigeron canadensis HOM05D003114 ORTHO05D003519 2.3e-33 146.0 140 52.9
Os11g0276000 Oryza sativa ssp. japonica HOM05D003114 ORTHO05D003519 2.3e-33 146.0 141 53.2
Rhsim12G0123700 Rhododendron simsii HOM05D003114 ORTHO05D003519 3.0e-33 145.6 140 51.4
Atru.chr13.574 Acer truncatum HOM05D003114 ORTHO05D003519 5.1e-33 144.8 136 53.7
QL02p007130 Quercus lobata HOM05D003114 ORTHO05D003519 5.1e-33 144.8 140 52.9
vmacro04486 Vaccinium macrocarpon HOM05D003114 ORTHO05D003519 8.8e-33 144.1 140 51.4
MBI16_g36197_MAGBIO Magnolia biondii HOM05D003114 ORTHO05D003519 1.1e-32 143.7 90 70.0
Potri.002G131400 Populus trichocarpa HOM05D003114 ORTHO05D003519 1.1e-32 143.7 143 54.5
CANSAT25G1109 Cannabis sativa HOM05D003114 ORTHO05D003519 1.5e-32 143.3 140 52.9
Potri.014G039100 Populus trichocarpa HOM05D003114 ORTHO05D003519 1.5e-32 143.3 142 52.1
Thecc.08G020200 Theobroma cacao HOM05D003114 ORTHO05D003519 1.5e-32 143.3 142 54.2
CiPaw.16G052700 Carya illinoinensis HOM05D003114 ORTHO05D003519 1.9e-32 142.9 145 53.1
CiPaw.15G069400 Carya illinoinensis HOM05D003114 ORTHO05D003519 2.5e-32 142.5 140 52.1
Manes.18G031300 Manihot esculenta HOM05D003114 ORTHO05D003519 3.3e-32 142.1 142 52.8
PSO541G3592 Papaver somniferum HOM05D003114 ORTHO05D003519 3.3e-32 142.1 140 52.9
PSO675G2900 Papaver somniferum HOM05D003114 ORTHO05D003519 3.3e-32 142.1 140 52.9
SGA_v2.0_scaffold14G07047 Striga asiatica HOM05D003114 ORTHO05D003519 3.3e-32 142.1 144 52.1
Actinidia38026 Actinidia chinensis HOM05D003114 ORTHO05D003519 4.3e-32 141.7 140 50.7
Ciclev10000230m.g Citrus clementina HOM05D003114 ORTHO05D003519 4.3e-32 141.7 142 53.5
HanXRQChr02g0045841 Helianthus annuus HOM05D003114 ORTHO05D003519 4.3e-32 141.7 143 52.4
SalBow8G4186 Salvia bowleyana HOM05D003114 ORTHO05D003519 4.3e-32 141.7 144 52.8
Dinv36027 Davidia involucrata HOM05D003114 ORTHO05D003519 5.7e-32 141.4 140 51.4
TWI12G1412 Tripterygium wilfordii HOM05D003114 ORTHO05D003519 5.7e-32 141.4 140 51.4
COL.COLO4_26390 Corchorus olitorius HOM05D003114 ORTHO05D003519 7.4e-32 141.0 141 51.8
Lalb_Chr22g0355341 Lupinus albus HOM05D003114 ORTHO05D003519 7.4e-32 141.0 90 70.0
Nitab4.5_0008571g0020 Nicotiana tabacum HOM05D003114 ORTHO05D003519 7.4e-32 141.0 90 68.9
TAR381G0473 Trochodendron aralioides HOM05D003114 ORTHO05D003519 7.4e-32 141.0 90 70.0
TAR625G0620 Trochodendron aralioides HOM05D003114 ORTHO05D003519 7.4e-32 141.0 142 52.8
GSVIVG01009623001 Vitis vinifera HOM05D003114 ORTHO05D003519 7.4e-32 141.0 90 71.1
Aqoxy5G01744 Aquilegia oxysepala HOM05D003114 ORTHO05D003519 9.7e-32 140.6 90 67.8
Duzib041G0357 Durio zibethinus HOM05D003114 ORTHO05D003519 9.7e-32 140.6 142 52.8
Lsat_1_v5_gn_1_19460 Lactuca sativa HOM05D003114 ORTHO05D003519 9.7e-32 140.6 143 51.7
Solyc07g025170.3 Solanum lycopersicum HOM05D003114 ORTHO05D003519 9.7e-32 140.6 90 67.8
Sopen07g012830 Solanum pennellii HOM05D003114 ORTHO05D003519 9.7e-32 140.6 90 67.8
Duzib093G1140 Durio zibethinus HOM05D003114 ORTHO05D003519 1.3e-31 140.2 142 52.8
Eucgr.A00473 Eucalyptus grandis HOM05D003114 ORTHO05D003519 1.3e-31 140.2 140 51.4
Glyma.09G114500 Glycine max HOM05D003114 ORTHO05D003519 1.3e-31 140.2 90 70.0
Glyma.17G246600 Glycine max HOM05D003114 ORTHO05D003519 1.3e-31 140.2 90 70.0
Peaxi162Scf01340g00219 Petunia axillaris HOM05D003114 ORTHO05D003519 1.3e-31 140.2 141 51.8
HPP92_006943 Vanilla planifolia HOM05D003114 ORTHO05D003519 1.3e-31 140.2 90 72.2
VMungo0647G1300 Vigna mungo HOM05D003114 ORTHO05D003519 1.3e-31 140.2 90 70.0
Carub.0001s3632 Capsella rubella HOM05D003114 ORTHO05D003519 1.7e-31 139.8 141 51.8
Nitab4.5_0002940g0040 Nicotiana tabacum HOM05D003114 ORTHO05D003519 1.7e-31 139.8 143 51.7
Sabra02G0103300 Salix brachista HOM05D003114 ORTHO05D003519 1.7e-31 139.8 143 53.8
ATR0733G144 Amborella trichopoda HOM05D003114 ORTHO05D003519 2.2e-31 139.4 90 70.0
AL1G53790 Arabidopsis lyrata HOM05D003114 ORTHO05D003519 2.2e-31 139.4 141 51.8
Dinv39367 Davidia involucrata HOM05D003114 ORTHO05D003519 2.2e-31 139.4 140 50.7
Glyma.04G034700 Glycine max HOM05D003114 ORTHO05D003519 2.2e-31 139.4 141 49.6
Lalb_Chr08g0245771 Lupinus albus HOM05D003114 ORTHO05D003519 2.2e-31 139.4 141 50.4
MD00G1038900 Malus domestica HOM05D003114 ORTHO05D003519 2.2e-31 139.4 142 50.7
THA.LOC104803395 Tarenaya hassleriana HOM05D003114 ORTHO05D003519 2.2e-31 139.4 142 50.7
Aqoxy6G00963 Aquilegia oxysepala HOM05D003114 ORTHO05D003519 2.8e-31 139.0 140 50.7
CANSAT21G1752 Cannabis sativa HOM05D003114 ORTHO05D003519 2.8e-31 139.0 90 70.0
Medtr3g111590 Medicago truncatula HOM05D003114 ORTHO05D003519 2.8e-31 139.0 141 50.4
Psat6g010640 Pisum sativum HOM05D003114 ORTHO05D003519 2.8e-31 139.0 90 70.0
Solyc12g088990.2 Solanum lycopersicum HOM05D003114 ORTHO05D003519 2.8e-31 139.0 141 48.9
Sopen12g030890 Solanum pennellii HOM05D003114 ORTHO05D003519 2.8e-31 139.0 141 48.9
CAN.G1002.6 Capsicum annuum HOM05D003114 ORTHO05D003519 3.7e-31 138.7 145 51.0
Cc10_g03540 Coffea canephora HOM05D003114 ORTHO05D003519 3.7e-31 138.7 141 50.4
Lj4C782G7 Lonicera japonica HOM05D003114 ORTHO05D003519 3.7e-31 138.7 142 52.8
Phvul.001G017700 Phaseolus vulgaris HOM05D003114 ORTHO05D003519 3.7e-31 138.7 90 68.9
Sp1g34560 Schrenkiella parvula HOM05D003114 ORTHO05D003519 3.7e-31 138.7 141 51.1
Peaxi162Scf00064g00324 Petunia axillaris HOM05D003114 ORTHO05D003519 4.8e-31 138.3 143 49.7
AT1G47550 Arabidopsis thaliana HOM05D003114 ORTHO05D003519 6.3e-31 137.9 141 51.1
Hma1.2p1_0260F.1_g104360 Hydrangea macrophylla HOM05D003114 ORTHO05D003519 6.3e-31 137.9 145 51.7
MD08G1038000 Malus domestica HOM05D003114 ORTHO05D003519 6.3e-31 137.9 142 51.4
Psat0s3702g0080 Pisum sativum HOM05D003114 ORTHO05D003519 6.3e-31 137.9 141 50.4
Ca_13324_v3 Cicer arietinum L. HOM05D003114 ORTHO05D003519 8.2e-31 137.5 90 68.9
Nitab4.5_0000790g0060 Nicotiana tabacum HOM05D003114 ORTHO05D003519 8.2e-31 137.5 145 49.7
Phvul.009G055500 Phaseolus vulgaris HOM05D003114 ORTHO05D003519 8.2e-31 137.5 141 51.1
RcHm_v2.0_Chr6g0300281 Rosa chinensis HOM05D003114 ORTHO05D003519 8.2e-31 137.5 142 51.4
unitig_26.g9826 Utricularia gibba HOM05D003114 ORTHO05D003519 8.2e-31 137.5 138 50.7
Lalb_Chr24g0399101 Lupinus albus HOM05D003114 ORTHO05D003519 1.1e-30 137.1 90 70.0
Nitab4.5_0000453g0100 Nicotiana tabacum HOM05D003114 ORTHO05D003519 1.1e-30 137.1 141 47.5
Oeu009593.2 Olea europaea HOM05D003114 ORTHO05D003519 1.1e-30 137.1 141 48.2
arahy.Tifrunner.gnm1.ann1.E8QAF1 Arachis hypogaea HOM05D003114 ORTHO05D003519 1.4e-30 136.7 141 51.1
arahy.Tifrunner.gnm1.ann1.SVX42N Arachis hypogaea HOM05D003114 ORTHO05D003519 1.4e-30 136.7 141 51.1
ClCG05G019260 Citrullus lanatus HOM05D003114 ORTHO05D003519 1.4e-30 136.7 142 51.4
DCAR_019500 Daucus carota HOM05D003114 ORTHO05D003519 1.4e-30 136.7 146 48.6
Migut.N02678 Erythranthe guttata HOM05D003114 ORTHO05D003519 1.4e-30 136.7 145 50.3
Thhalv10011225m.g Eutrema salsugineum HOM05D003114 ORTHO05D003519 1.4e-30 136.7 141 50.4
Gohir.A05G197600 Gossypium hirsutum HOM05D003114 ORTHO05D003519 1.4e-30 136.7 140 50.0
Gohir.D05G200600 Gossypium hirsutum HOM05D003114 ORTHO05D003519 1.4e-30 136.7 140 50.0
Gorai.009G205900 Gossypium raimondii HOM05D003114 ORTHO05D003519 1.4e-30 136.7 140 50.0
Nn5g29441 Nelumbo nucifera HOM05D003114 ORTHO05D003519 1.4e-30 136.7 140 50.7
Sed0021383 Sechium edule HOM05D003114 ORTHO05D003519 1.4e-30 136.7 140 50.7
AT1G47560 Arabidopsis thaliana HOM05D003114 ORTHO05D003519 1.8e-30 136.3 141 51.1
MSTRG.22284 Avicennia marina HOM05D003114 ORTHO05D003519 1.8e-30 136.3 141 51.8
MSTRG.24311 Avicennia marina HOM05D003114 ORTHO05D003519 1.8e-30 136.3 141 51.1
MELO3C003892.2 Cucumis melo HOM05D003114 ORTHO05D003519 1.8e-30 136.3 143 51.7
CsaV3_3G044820 Cucumis sativus L. HOM05D003114 ORTHO05D003519 1.8e-30 136.3 143 51.7
Gohir.A11G224300 Gossypium hirsutum HOM05D003114 ORTHO05D003519 1.8e-30 136.3 142 50.7
Gohir.D11G228600 Gossypium hirsutum HOM05D003114 ORTHO05D003519 1.8e-30 136.3 142 50.7
Gorai.007G245700 Gossypium raimondii HOM05D003114 ORTHO05D003519 1.8e-30 136.3 142 50.7
PGR031G3129 Punica granatum HOM05D003114 ORTHO05D003519 1.8e-30 136.3 143 48.3
SGA_v2.0_scaffold24G10278 Striga asiatica HOM05D003114 ORTHO05D003519 1.8e-30 136.3 143 49.0
TPR.G27771 Trifolium pratense HOM05D003114 ORTHO05D003519 1.8e-30 136.3 89 69.7
MSTRG.1310 Avicennia marina HOM05D003114 ORTHO05D003519 2.4e-30 136.0 141 50.4
BcaB07g33828 Brassica carinata HOM05D003114 ORTHO05D003519 2.4e-30 136.0 141 49.6
BcaC08g42958 Brassica carinata HOM05D003114 ORTHO05D003519 2.4e-30 136.0 141 49.6
A10p06300 Brassica napus HOM05D003114 ORTHO05D003519 2.4e-30 136.0 141 49.6
C06p01990 Brassica napus HOM05D003114 ORTHO05D003519 2.4e-30 136.0 141 49.6
BraA10t42896Z Brassica rapa HOM05D003114 ORTHO05D003519 2.4e-30 136.0 141 49.6
Cfa018458 Carpinus fangiana HOM05D003114 ORTHO05D003519 2.4e-30 136.0 140 51.4
AUR62042151 Chenopodium quinoa HOM05D003114 ORTHO05D003519 2.4e-30 136.0 136 51.5
Haze_17610 Corylus avellana HOM05D003114 ORTHO05D003519 2.4e-30 136.0 140 51.4
DCAR_019495 Daucus carota HOM05D003114 ORTHO05D003519 2.4e-30 136.0 89 67.4
Oeu015606.1 Olea europaea HOM05D003114 ORTHO05D003519 2.4e-30 136.0 145 51.7
Phvul.007G175100 Phaseolus vulgaris HOM05D003114 ORTHO05D003519 2.4e-30 136.0 141 49.6
CDE07G1354 Ceratophyllum demersum HOM05D003114 ORTHO05D003519 3.1e-30 135.6 90 65.6
Migut.C00667 Erythranthe guttata HOM05D003114 ORTHO05D003519 3.1e-30 135.6 143 49.0
Lj5g0027441 Lotus japonicus HOM05D003114 ORTHO05D003519 3.1e-30 135.6 141 51.1
Zm00001eb051220 Zea mays HOM05D003114 ORTHO05D003519 3.1e-30 135.6 90 67.8
Aa31sc119G20 Aethionema arabicum HOM05D003114 ORTHO05D003519 4.1e-30 135.2 141 48.9
Sed0016520 Sechium edule HOM05D003114 ORTHO05D003519 4.1e-30 135.2 90 68.9
CARHR037120 Cardamine hirsuta HOM05D003114 ORTHO05D003519 5.3e-30 134.8 141 50.4
EL10Ac5g11704 Beta vulgaris HOM05D003114 ORTHO05D003519 6.9e-30 134.4 142 50.0
FvH4_2g40450 Fragaria vesca HOM05D003114 ORTHO05D003519 6.9e-30 134.4 140 50.0
FAN20G2585 Fragaria x ananassa HOM05D003114 ORTHO05D003519 6.9e-30 134.4 140 50.0
TWI36G0061 Tripterygium wilfordii HOM05D003114 ORTHO05D003519 6.9e-30 134.4 136 50.7
Mapoly0013s0072 Marchantia polymorpha HOM05D003114 ORTHO05D003519 9.1e-30 134.0 86 69.8
Migut.E01196 Erythranthe guttata HOM05D003114 ORTHO05D003519 1.2e-29 133.7 90 64.4
FAN15G2607 Fragaria x ananassa HOM05D003114 ORTHO05D003519 1.2e-29 133.7 140 50.0
Os03g0625700 Oryza sativa ssp. japonica HOM05D003114 ORTHO05D003519 1.2e-29 133.7 90 67.8
FAN27G1632 Fragaria x ananassa HOM05D003114 ORTHO05D003519 1.5e-29 133.3 140 49.3
VMungo1309G2059 Vigna mungo HOM05D003114 ORTHO05D003519 1.5e-29 133.3 140 50.0
arahy.Tifrunner.gnm1.ann1.06HR6X Arachis hypogaea HOM05D003114 ORTHO05D003519 2.0e-29 132.9 90 64.4
HanXRQChr09g0268391 Helianthus annuus HOM05D003114 ORTHO05D003519 2.0e-29 132.9 90 65.6
Lj4C47G8 Lonicera japonica HOM05D003114 ORTHO05D003519 2.6e-29 132.5 140 48.6
Lalb_Chr14g0368971 Lupinus albus HOM05D003114 ORTHO05D003519 3.4e-29 132.1 90 65.6
Medtr1g021680 Medicago truncatula HOM05D003114 ORTHO05D003519 3.4e-29 132.1 141 49.6
arahy.Tifrunner.gnm1.ann1.I3NIKD Arachis hypogaea HOM05D003114 ORTHO05D003519 4.5e-29 131.7 90 64.4
Lsat_1_v5_gn_4_122960 Lactuca sativa HOM05D003114 ORTHO05D003519 4.5e-29 131.7 90 63.3
Nn6g32175 Nelumbo nucifera HOM05D003114 ORTHO05D003519 4.5e-29 131.7 142 52.8
Gohir.A05G260500 Gossypium hirsutum HOM05D003114 ORTHO05D003519 7.7e-29 131.0 142 47.9
SMO117G0063 Selaginella moellendorffii HOM05D003114 ORTHO05D003519 1.0e-28 130.6 83 67.5
HPP92_006946 Vanilla planifolia HOM05D003114 ORTHO05D003519 1.0e-28 130.6 92 69.6
AagrBONN_evm.TU.Sc2ySwM_228.1666 Anthoceros agrestis HOM05D003114 ORTHO05D003519 2.2e-28 129.4 144 45.1
AagrBONN_evm.TU.Sc2ySwM_228.1675 Anthoceros agrestis HOM05D003114 ORTHO05D003519 2.2e-28 129.4 144 45.1
AUR62038454 Chenopodium quinoa HOM05D003114 ORTHO05D003519 3.8e-28 128.6 137 49.6
DCAR_020951 Daucus carota HOM05D003114 ORTHO05D003519 8.5e-28 127.5 89 60.7
HanXRQChr16g0507961 Helianthus annuus HOM05D003114 ORTHO05D003519 2.5e-27 125.9 140 43.6
ECA232G2779 Erigeron canadensis HOM05D003114 ORTHO05D003519 4.2e-27 125.2 140 45.0
SalBow7G0889 Salvia bowleyana HOM05D003114 ORTHO05D003519 5.5e-27 124.8 90 62.2
Pp3c11_22450 Physcomitrium patens HOM05D003114 ORTHO05D003519 2.7e-26 122.5 86 64.0
unitig_899.g15621 Utricularia gibba HOM05D003114 ORTHO05D003519 3.9e-25 118.6 90 58.9
BolC6t35330H Brassica oleracea HOM05D003114 ORTHO05D003519 2.0e-24 116.3 148 44.6
SHI08196 Sapria himalayana HOM05D003114 ORTHO05D003519 8.5e-20 100.9 97 51.5
Pp3c11_16180 Physcomitrium patens HOM05D003114 ORTHO05D003519 1.4e-19 100.1 87 54.0
Gohir.D05G262600 Gossypium hirsutum HOM05D003114 ORTHO05D003519 3.2e-19 99.0 136 43.4
Ah.02g115920 Amaranthus hybridus HOM05D003114 ORTHO05D003519 7.2e-19 97.8 110 48.2
CAN.G389.2 Capsicum annuum HOM05D003114 ORTHO05D003519 7.2e-19 97.8 109 48.6
CBR_g3845 Chara braunii HOM05D003114 ORTHO05D003519 1.2e-18 97.1 90 48.9
Ca_15530_v3 Cicer arietinum L. HOM05D003114 ORTHO05D003519 2.1e-18 96.3 58 72.4
Gorai.009G274500 Gossypium raimondii HOM05D003114 ORTHO05D003519 2.7e-18 95.9 136 42.6
Prupe.1G385700 Prunus persica HOM05D003114 ORTHO05D003519 6.1e-18 94.7 108 47.2
Pp3c1_15530 Physcomitrium patens HOM05D003114 ORTHO05D003519 2.0e-16 89.7 93 45.2
CBR_g48206 Chara braunii HOM05D003114 ORTHO05D003519 1.3e-15 87.0 88 47.7
CDE04G0236 Ceratophyllum demersum HOM05D003114 ORTHO05D003519 2.2e-15 86.3 58 62.1
Zm00001eb168780 Zea mays HOM05D003114 ORTHO05D003519 1.2e-13 80.5 51 68.6
Glyma.09G114700 Glycine max HOM05D003114 ORTHO05D003519 2.5e-11 72.8 44 72.7
Sc07g0007470 Simmondsia chinensis HOM05D003114 ORTHO05D003519 1.4e-09 67.0 95 42.1


User provided reference genes

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